GFIT result for T02423

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

msa:Mycsm_03038
(295 a.a.)
 
--
 
K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> mia:OCU_29810(296)29166.31331(784)5<- K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)29166.01326(776)4<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)29166.01326(776)4<- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)29166.01326(776)3<- K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)29165.61320(780)3<- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)29165.31310(760)3<- K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)30158.51192(677)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_0339(312)29351.5983(400)9-- K01971  ligD  [tr:G2PB75_STRVO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_24695(312)29350.2970(384)7-- K01971  ligD  [tr:A0A0A0NK22_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(361)28651.0959(365)2-- K01971  ligD  [tr:A0A0D4DGP5_9ACTN] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)28750.2955(407)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)29648.3953
0-- K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)28647.2919(288)0-- K01971  ligD  [tr:A0A143PN04_9BACT] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)29149.5916(340)0-- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7216(311)29947.8899(301)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_7456(311)29947.8899(301)12-- K01971  ligD  [tr:H2JMG2_STRHJ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)28746.7896(783)0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)29947.8896(292)5-- K01971  ligD  [tr:A0A0B5I658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)29048.6890(284)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)29147.1876(277)0-- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)29647.6874(300)15-- K01971  ligD  [tr:A0A0K2B2C0_STRAM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)29147.1869(264)4-- K01971  ligD  [tr:A0A089XJS0_STRGA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)28145.6868
0-- K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)29647.0867(305)6-- K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07099(311)29746.5867(263)0-- K01971  ligD  [tr:A0A0U5LT13_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)29647.0863(301)10-- K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)28045.4854
0-- K01971  ligD  [tr:D1Z0H5_METPS] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)28947.8853(252)0-- K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)28948.1852(277)24-- K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)29546.8849(307)8-- K01971  ligD  [tr:A0A0B5EW78_STRA4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_3394(292)28045.4846(272)3--     [tr:A4FF44_SACEN] ATP-dependent DNA ligase (EC:6.5.1.1)
> mlt:VC82_553(323)28741.1840
0-- K01971  ligD  [tr:A0A0D5YPS4_9FLAO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_3248(328)28945.3839(144)7-- K01971  ligD  [tr:A7HFE5_ANADF] DNA polymerase LigD polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)29545.8836(236)7-- K01971  ligD  [tr:A0A0C5G7H9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_12820(311)29545.8836(233)0-- K01971  ligD  [tr:A0A0F7VLX0_9ACTN] sle_12820; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_4488(313)29445.6813(250)17-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5203(287)28842.7797(108)11-- K01971  ligD  [tr:A0A0H3D8J2_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5141(287)28842.7797(108)11-- K01971  ligD  [tr:G0FQR0_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)28842.7797(108)11-- K01971  ligD  [tr:G0FQR0_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)28842.7797(108)11-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)28239.0787
0<- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llo:LLO_1004(293)28338.9765
0-- K01971  ligD  [tr:D3HR29_LEGLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)28838.9725
0-- K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> age:AA314_02665(854)27341.8719(210)5-- K01971  ligD  [tr:A0A0G2ZQM1_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)28839.2714()3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)27440.1714(604)0-- K01971  ligD  [tr:A0A142YAI4_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nda:Ndas_0258(292)28941.5705(589)6-- K01971  ligD  [tr:D7AUE9_NOCDD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_167(313)30334.7702
0-- K01971  ligD  [tr:V6DGX3_9DELT] ykoU; Eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sti:Sthe_0314(301)27339.6699
1-- K01971  ligD  [tr:D1C6Z2_SPHTD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)28138.4688()0-- K01971  ligD  [tr:A0A0X8HBT1_9GAMM] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nal:B005_3125(304)29143.3687(577)1-- K01971  ligD  [tr:J7LBG3_NOCAA] ligD; DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_09695(786)29539.3684(15)28-- K01971  ligD  [tr:S4XS85_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)28238.7678()1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_16940(898)28237.2677(8)0-- K01971  ligD  [tr:A0A142WYC5_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)29034.8676
0-- K01971  ligD  [tr:A0A0P0CYM1_9BACT] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)29538.3675(129)3-- K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)27339.9673()7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> vin:AKJ08_0648(618)27341.4673(573)2-- K01971  ligD  [tr:A0A0K1PA21_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)28538.2672(46)7-- K01971  ligD  [tr:C3MIG9_SINFN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)29141.2667(34)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)28537.5667()2-- K01971  ligD  [tr:A0A0K2BE58_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)29034.5666()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)28339.2664
82-- K01971  ligD  [tr:A9GRV1_SORC5] unnamed protein product; High confidence in function and specificity (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpa:lpa_03649(296)27737.5662
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpc:LPC_1974(296)27737.5662
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)29234.6662(106)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0935(789)29140.2661(23)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)28837.5660(559)3-- K01971  ligD  [tr:F3YU59_DESAF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)29435.7656(124)3-- K01971  ligD  [tr:C7PLF2_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)28437.7656(86)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)29336.2654()0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)28336.0653(37)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)29534.6652(74)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sur:STAUR_6997(836)26837.3652(514)8-- K01971  ligD  [tr:Q09E36_STIAD] ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0884(726)29339.6645(17)346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbh:AAW51_3125(873)28237.2642(536)0-- K01971  ligD  [tr:A0A0G3BR42_9BURK] ligD; bifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)29536.3640()0-- K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)26935.7639()1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmr:Tmar_1127(316)28938.8638
4-- K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)27236.8635(47)1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strm:M444_27905(332)28138.1634(205)3--     [tr:A0A0G3UXE9_9ACTN] ATP-dependent DNA ligase
> cih:ATE47_13465(629)27136.2633(87)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)29035.9633(533)2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)29638.5633(529)0-- K01971  ligD  [tr:A0A0K2SMK4_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msd:MYSTI_01057(341)27938.7633(517)36-- K01971  ligD  [tr:L7U0S6_MYXSD] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)28236.9631()1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)27034.4631()4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)29531.2631()1-- K01971  ligD  [tr:F0SBI2_PSESL] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)26736.0630()1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)28735.9630(517)1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)29234.6629()0-- K01971  ligD  [tr:W0EYS4_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psd:DSC_15030(830)28435.9628()7-- K01971  ligD  [tr:G7UVI9_PSEUP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)28535.8628(10)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14770(815)28538.9627(8)1-- K01971  ligD  [tr:A0A0K0TZ07_9RHIZ] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)28634.3627()2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtc:APU90_01650(323)27840.6627()0--     [tr:A0A0C5BDX2_9MICO] ATP-dependent DNA ligase
> rtx:TI83_04825(323)27840.6627()0--     [tr:A0A0C5BDX2_9MICO] ATP-dependent DNA ligase
> sch:Sphch_2999(835)27437.2627(515)6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)26934.2627()1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)27237.5627
0-- K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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