GFIT result for T02423

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

msa:Mycsm_06080
(350 a.a.)
 
--
 
    [tr:L0J3V2_9MYCO] DNA polymerase LigD, polymerase domain protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> msb:LJ00_31150(349)34683.52075(1148)3->     [tr:I7GFM1_MYCS2] ATP-dependent DNA ligase
> msg:MSMEI_6136(349)34683.52075(1148)3->     [tr:I7GFM1_MYCS2] DNA primase small subunit (EC:6.5.1.1)
> msh:LI98_31160(349)34683.52075(1148)3->     [tr:A0A0D6J1J2_MYCSM] ATP-dependent DNA ligase
> msm:MSMEG_6301(350)34683.52075(1144)3->     [tr:A0R5T1_MYCS2] ligD; DNA polymerase LigD polymerase subunit
> msn:LI99_31155(349)34683.52075(1148)3->     [tr:A0A0D6J1J2_MYCSM] ATP-dependent DNA ligase
> mgo:AFA91_03770(348)34682.92067(1154)2->     [tr:A0A0K0X115_9MYCO] ATP-dependent DNA ligase
> myv:G155_28120(352)34582.92021(1057)3->     [tr:A0A0A1FYF0_9MYCO] ATP-dependent DNA ligase
> mgi:Mflv_1274(349)34981.72020(1074)4->     [tr:A4T630_MYCGI] DNA primase, small subunit
> msp:Mspyr1_49090(349)34981.72020(1074)4->     [tr:E6TKH8_MYCSR] DNA polymerase LigD, polymerase domain
> mft:XA26_56830(352)34582.92019(1063)0->     [tr:A0A0N9XRE2_MYCFO] ATP-dependent DNA ligase (EC:6.5.1.1)
> mva:Mvan_5542(349)34881.92017(1057)4->     [tr:A1TGK8_MYCVP] conserved hypothetical protein
> mrh:MycrhN_2050(348)34982.82012(1074)3->     [tr:G8RQQ0_MYCRN] DNA polymerase LigD, polymerase domain protein
> mcb:Mycch_4875(347)34881.02009(1050)3->     [tr:I4BQL1_MYCCN] DNA polymerase LigD, polymerase domain protein
> mye:AB431_27585(349)34782.12009(1047)3->     [tr:A0A0G3IQM4_9MYCO] ATP-dependent DNA ligase
> mjl:Mjls_5283(347)34682.42006(1105)5->    DNA primase, small subunit
> mne:D174_25760(350)35081.12006(1032)4->     [tr:V5XH29_MYCNE] ATP-dependent DNA ligase
> mkm:Mkms_5004(347)34682.12000(1096)5->     [tr:A1UMY5_MYCSK] conserved hypothetical protein
> mmc:Mmcs_4915(347)34682.12000(1096)5->    conserved hypothetical protein
> mks:LG40_13460(345)34578.61953(1009)4--    ATP-dependent DNA ligase
> mcx:BN42_90249(346)33580.61945(1022)2->    Conserved protein of unknown function
> mcz:BN45_110090(346)33580.61944(1014)2->    Conserved protein of unknown function
> mhad:B586_03590(346)33779.81936(1032)0--    ATP-dependent DNA ligase
> maf:MAF_37390(346)33580.31933(1027)3->     [tr:F8M957_MYCA0] conserved hypothetical protein
> mbb:BCG_3790c(346)33580.31933(1027)3->     [tr:A0A0H3MAH6_MYCBP] hypothetical protein
> mbk:K60_038700(346)33580.31933(1027)3->    hypothetical protein
> mbm:BCGMEX_3791c(346)33580.31933(1027)3->    Hypothetical protein
> mbo:Mb3757c(346)33580.31933(1027)3->     [tr:A0A0H3P6H4_MYCBO] hypothetical protein
> mbt:JTY_3792(346)33580.31933(1027)3->    hypothetical protein
> mbx:BCGT_3593(346)33580.31933(1027)3->    ATP-dependent DNA ligase (EC:6.5.1.1)
> mbz:LH58_20165(346)33580.31933(1027)3->     [tr:A0A083VRK9_MYCBI] ATP-dependent DNA ligase
> mce:MCAN_37521(346)33580.31933(1027)2->     [tr:G0TKD7_MYCCP] conserved hypothetical protein
> mcq:BN44_120130(346)33580.31933(1027)3->    Conserved protein of unknown function
> mcv:BN43_90239(346)33580.31933(1027)3->    Conserved protein of unknown function
> mra:MRA_3768(346)33580.31933(1027)3->     [tr:A5U957_MYCTA] hypothetical protein
> mtb:TBMG_03775(346)33580.31933(1027)3->    conserved hypothetical protein
> mtc:MT3835(346)33580.31933(1027)3->     [tr:L7N4E5_MYCTO] conserved hypothetical protein
> mtd:UDA_3730c(346)33580.31933(1027)3->    unnamed protein product
> mte:CCDC5079_3462(359)33580.31933(1027)3->    hypothetical protein
> mtf:TBFG_13762(346)33580.31933(1027)3->    conserved hypothetical protein
> mtj:J112_20055(346)33580.31933(1027)3->    hypothetical protein
> mtk:TBSG_03798(346)33580.31933(1027)3->    conserved hypothetical protein
> mtl:CCDC5180_3413(346)33580.31933(1027)3->    hypothetical protein
> mtn:ERDMAN_4087(346)33580.31933(1027)3->     [tr:A0A0H3LMP6_MYCTE] hypothetical protein
> mto:MTCTRI2_3803(346)33580.31933(1027)3->    hypothetical protein
> mtq:HKBS1_3951(346)33580.31933(1027)3->    hypothetical protein
> mtu:Rv3730c(346)33580.31933(1027)3->     [tr:O69697_MYCTU] hypothetical protein
> mtub:MT7199_3797(346)33580.31933(1027)3->    hypothetical protein
> mtuc:J113_26045(346)33580.31933(1516)2->     [tr:R4MNZ4_MYCTX] hypothetical protein
> mtue:J114_19930(346)33580.31933
1->    hypothetical protein
> mtul:TBHG_03666(346)33580.31933(1027)3->    DNA ligase LigD
> mtur:CFBS_3954(346)33580.31933(1027)3->    hypothetical protein
> mtut:HKBT1_3938(346)33580.31933(1027)3->    hypothetical protein
> mtuu:HKBT2_3948(346)33580.31933(1027)3->    hypothetical protein
> mtv:RVBD_3730c(346)33580.31933(1027)3->     [tr:O69697_MYCTU] DNA ligase LigD
> mtx:M943_19175(359)33580.31933(1027)3->    ATP-dependent DNA ligase
> mtz:TBXG_003745(346)33580.31933(1027)3->    hypothetical protein
> mao:MAP4_3530(342)33180.41928(1060)3->    hypothetical protein
> mavi:RC58_17535(342)33180.41928(1048)2->    ATP-dependent DNA ligase
> mavu:RE97_17570(342)33180.41928(1060)2->    ATP-dependent DNA ligase
> mpa:MAP_0340c(342)33180.41928(1060)0->     [tr:Q744K1_MYCPA] hypothetical protein
> mie:LG41_01625(343)33181.31927(1044)3->     [tr:X8CKM3_MYCIT] ATP-dependent DNA ligase
> mki:LH54_13600(345)34576.81926(982)3->     [tr:X7YEE8_MYCKA] ATP-dependent DNA ligase
> mkn:MKAN_13620(345)34576.81926(982)3->     [tr:U5WQH5_MYCKA] ATP-dependent DNA ligase
> mir:OCQ_03210(343)33181.01925(1042)3->    hypothetical protein
> mid:MIP_00683(343)33181.01923(1040)2->     [tr:J9W6I2_MYCIP] Putative DNA ligase-like protein
> mav:MAV_0362(342)33180.11922(1047)2->     [tr:A0A0H3A1W1_MYCA1] ligD; DNA polymerase LigD, polymerase domain
> mava:LA64_01715(342)33180.11922(1047)2->    ATP-dependent DNA ligase
> mavd:NF84_01660(342)33180.11922(1047)2->    ATP-dependent DNA ligase
> mavr:LA63_01705(342)33180.11922(1047)2->     [tr:X8BCY5_MYCAV] ATP-dependent DNA ligase
> mmm:W7S_01570(343)33180.71921(1038)3->     [tr:I2A7M5_9MYCO] hypothetical protein
> myo:OEM_03300(343)33180.71921(1038)3->     [tr:S4Z3B4_9MYCO] hypothetical protein
> mtuh:I917_26195(346)33579.71920(1080)1->     [tr:R4MBG1_MYCTX] hypothetical protein
> mia:OCU_03270(343)33180.71915(1034)3->     [tr:H8ILS5_MYCIA] hypothetical protein
> mit:OCO_03170(343)33180.71911(1028)3->    hypothetical protein
> mmi:MMAR_5265(346)34077.91894(988)2->     [tr:B2HLD7_MYCMM] conserved hypothetical protein
> mul:MUL_4339(346)33578.21875(975)2->     [tr:A0PVH4_MYCUA] conserved hypothetical protein
> mjd:JDM601_4022(351)34375.21850(864)4->     [tr:F5YT33_MYCSD] conserved hypothetical protein
> mtg:MRGA327_22985(324)31381.21827(1019)2->    hypothetical protein
> mabb:MASS_0282(346)33673.51781(888)2->     [tr:R4UG35_9MYCO] hypothetical protein
> mabl:MMASJCM_0276(346)33673.51781(888)2->    ATP-dependent DNA ligase
> mabo:NF82_01410(342)33673.51781(892)3->    ATP-dependent DNA ligase
> mak:LH56_21075(342)33673.51781(888)2->    ATP-dependent DNA ligase
> may:LA62_01415(342)33673.51781(892)3->    ATP-dependent DNA ligase
> maz:LA61_01330(342)33673.51781(892)3->    ATP-dependent DNA ligase
> mmv:MYCMA_0149(342)33673.51781(888)2->    ATP-dependent DNA ligase
> myc:NF90_21735(342)33673.51781(888)2->    ATP-dependent DNA ligase
> mys:NF92_21725(342)33673.51781(888)2->    ATP-dependent DNA ligase
> mti:MRGA423_23530(367)31578.11733(925)2--    hypothetical protein
> rha:RHA1_ro05108(342)33771.51720(608)2->     [tr:Q0S6E7_RHOJR] possible DNA ligase (ATP), N-terminal
> roa:Pd630_LPD01628(342)33771.21717(590)3->     [tr:W8GTD1_RHOOP] putative ATP-dependent DNA ligase ykoU
> rop:ROP_51690(342)33770.01701(580)5->     [tr:C1AUS6_RHOOB] hypothetical protein
> rav:AAT18_23210(350)33668.81672(1222)2->     [tr:A0A059MI76_9NOCA] ATP-dependent DNA ligase
> rpy:Y013_12140(350)33768.21661(604)3->     [tr:V9XHA3_9NOCA] ATP-dependent DNA ligase
> req:REQ_42490(348)33566.91652(1199)1->     [tr:E4W9U1_RHOE1] conserved hypothetical protein
> rey:O5Y_23605(346)33768.21630(1198)1->     [tr:T1VUN9_RHOER] hypothetical protein
> rer:RER_49750(346)33768.21628(1191)1->     [tr:C0ZPI7_RHOE4] conserved hypothetical protein
> reb:XU06_24020(346)33768.01619(1187)1->     [tr:A0A0E4AB42_RHOER] ATP-dependent DNA ligase
> mab:MAB_0280(306)30673.21600(711)3->    hypothetical protein
> gbr:Gbro_0416(360)35361.81580(507)3->     [tr:D0LDD0_GORB4] DNA primase small subunit
> gpo:GPOL_c47200(358)35362.01543(502)3->     [tr:H6MZH7_GORPV] DNA primase, small subunit
... ... ...