GFIT result for T00443

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

nca:Noca_2445
(326 a.a.)
 
--
 
    [tr:A1SJG4_NOCSJ] putative DNA ligase (ATP), C-terminal
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> psim:KR76_14555(322)32179.81759(801)2--    ATP-dependent DNA ligase
> kfl:Kfla_5287(335)32075.91740(699)4--     [tr:D2PL46_KRIFD] DNA polymerase LigD, polymerase domain-containing protein
> afs:AFR_34555(319)32272.71697(574)4--     [tr:U5W830_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> actn:L083_6564(320)32074.41685(607)2--     [tr:R4LWM2_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> rha:RHA1_ro05237(323)31774.11662(677)4--     [tr:Q0S618_RHOJR] DNA ligase (ATP), C-terminal
> nml:Namu_0584(329)31275.61659(784)4--     [tr:C8X7D0_NAKMY] DNA polymerase LigD, polymerase domain-containing protein
> roa:Pd630_LPD01759(323)31773.81655(673)3--    putative ATP-dependent DNA ligase ykoU
> rop:ROP_52850(323)31674.41652(685)4--     [tr:C1AV42_RHOOB] hypothetical protein
> ncy:NOCYR_1435(316)31374.81649(776)3--     [tr:H6R7N7_NOCCG] putative DNA ligase (ATP), C-terminal
> nno:NONO_c59090(337)31174.61637(835)3--    ligD; putative DNA polymerase LigD
> amd:AMED_4612(314)30576.11634(597)8--     [tr:D8HVD8_AMYMU] lig; ATP-dependent DNA ligase
> amm:AMES_4557(314)30576.11634(597)8--     [tr:G0FMN1_AMYMS] lig; ATP-dependent DNA ligase
> amn:RAM_23480(314)30576.11634(597)8--     [tr:G0FMN1_AMYMS] ATP-dependent DNA ligase
> amz:B737_4557(314)30576.11634(597)8--    lig; ATP-dependent DNA ligase
> nbr:O3I_009195(324)31275.01634(781)6--     [tr:K0ESM6_9NOCA] putative DNA ligase (ATP), C-terminal
> sesp:BN6_43600(362)31772.61633(542)6--     [tr:K0K258_SACES] hypothetical protein
> bcv:Bcav_0664(334)32870.71620(591)4--     [tr:C5BY32_BEUC1] DNA polymerase LigD, polymerase domain-containing protein
> mph:MLP_05970(315)31373.51616(688)3--     [tr:F5XKS3_MICPN] hypothetical protein
> amq:AMETH_2185(309)31274.41614(500)7--    lig; DNA polymerase LigD, polymerase domain-containing protein
> asd:AS9A_4216(304)30472.71613(828)2--     [tr:F6EKA8_AMYSD] DNA polymerase LigD, polymerase domain-containing protein
> nfa:nfa13650(320)32172.61607(738)3--     [tr:Q5Z031_NOCFA] hypothetical protein
> ica:Intca_1898(322)32270.51606(949)5--     [tr:E6SBC1_INTC7] DNA polymerase LigD, polymerase domain-containing protein
> pdx:Psed_4714(323)32372.11600(563)6--     [tr:F4D173_PSEUX] DNA primase small subunit
> ams:AMIS_67600(313)31572.41598(506)3--     [tr:I0HG43_ACTM4] hypothetical protein
> ase:ACPL_7020(319)31771.91596(517)3--     [tr:G8SFA9_ACTS5] DNA ligase (ATP) (EC:6.5.1.1)
> rpy:Y013_00825(312)30773.31585(603)2--     [tr:V9XDE7_9NOCA] ATP-dependent DNA ligase
> gbr:Gbro_3272(328)32170.41576(676)3--     [tr:D0LCY3_GORB4] DNA polymerase LigD
> gor:KTR9_3313(329)32470.41574(680)2--     [tr:J9SN86_9ACTO] putative eukaryotic-type DNA primase
> aja:AJAP_17045(312)31571.71569(514)5--    Hypothetical protein
> alu:BB31_07720(316)32070.01549(483)6--    ATP-dependent DNA ligase
> aoi:AORI_4365(306)30772.61544(470)7--     [tr:R4SWR1_AMYOR] lig; DNA ligase (ATP)
> gpo:GPOL_c30660(318)31169.81530(607)3--     [tr:H6MVI7_GORPV] ligD; DNA polymerase LigD
> tpr:Tpau_2946(314)32065.91446(570)2--     [tr:D5UU41_TSUPD] DNA polymerase LigD, polymerase domain-containing protein
> ace:Acel_1378(339)31461.11285(715)2--     [tr:A0LUP0_ACIC1] hypothetical protein
> sve:SVEN_6395(343)31755.51175(667)4--     [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1)
> sro:Sros_6714(334)31753.31166()0--     [tr:D2B5B8_STRRD] DNA primase small subunit
> sct:SCAT_5514(335)31254.51163(715)8--     [tr:F8JRK1_STREN] hypothetical protein
> scy:SCATT_55170(335)31254.51163(715)8--     [tr:F8JRK1_STREN] hypothetical protein
> ssx:SACTE_5877(337)31154.71161(654)2--     [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain-containing protein
> scb:SCAB_13581(336)31354.31154(664)4--     [tr:C9Z887_STRSW] hypothetical protein
> tbi:Tbis_2258(332)31552.41154(642)1--     [tr:D6Y393_THEBD] DNA polymerase LigD ligase domain-containing protein
> scw:TU94_28790(341)31354.61149(687)4--    ATP-dependent DNA ligase
> sgu:SGLAU_28045(336)31354.61145(659)2--    hypothetical protein
> saq:Sare_1486(341)31755.21138(41)6--     [tr:A8LUN1_SALAI] DNA polymerase LigD polymerase subunit
> sfa:Sfla_0696(336)31152.71138(648)4--     [tr:E8WAH3_STRFA] DNA polymerase LigD, polymerase domain-containing protein
> strp:F750_6168(336)31152.71138(643)4--     [tr:M9U686_9ACTO] ATP-dependent DNA ligase (EC:6.5.1.1)
> sfi:SFUL_6474(345)31253.81135(625)3--     [tr:N0CZ27_9ACTO] eukaryotic-type DNA primase (EC:6.5.1.1)
> sdv:BN159_1715(338)31354.01134(659)3--     [tr:K4R0C7_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> sci:B446_30625(347)31353.71133(643)4--     [tr:S5VCP0_STRCU] hypothetical protein
> sma:SAV_1696(338)31353.01130(628)1--     [tr:Q82MG4_STRAW] hypothetical protein
> sgr:SGR_1023(345)31253.81128(619)1--     [tr:B1VU08_STRGG] hypothetical protein
> stp:Strop_2095(360)32853.01125(38)5--     [tr:A4X6P6_SALTO] DNA primase, small subunit
> mil:ML5_1895(341)31655.41124(54)6--    DNA polymerase ligd, polymerase domain-containing protein
> src:M271_07565(334)31253.51124(607)10--     [tr:A0A0A0NAI2_9ACTO] ATP-dependent DNA ligase
> mau:Micau_1636(341)31554.91123(55)6--     [tr:D9SZQ9_MICAI] DNA polymerase LigD polymerase subunit
> svl:Strvi_3580(334)31253.51120(588)9--     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain-containing protein
> sco:SCO6709(341)31352.71115(614)2--     [tr:Q9XAM1_STRCO] SC4C6.19; hypothetical protein
> slv:SLIV_04965(341)31352.71115(630)2--    hypothetical protein
> vma:VAB18032_12780(341)32353.61114(48)8--     [tr:F4FDY9_VERMA] DNA primase, small subunit
> svt:SVTN_31290(342)31752.41109(568)5--    ATP-dependent DNA ligase
> salb:XNR_0333(339)30752.81107(624)4--     [tr:D6AZX1_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> sho:SHJGH_7372(335)31252.21102(611)4--    hypothetical protein
> shy:SHJG_7611(335)31252.21102(611)4--     [tr:H2JQM4_STRHJ] hypothetical protein
> sbh:SBI_08909(334)31052.91101(610)1--     [tr:D7BZY7_STRBB] hypothetical protein
> salu:DC74_7354(337)31251.91077(617)5--    hypothetical protein
> cfi:Celf_0509(356)32849.71070(538)4--     [tr:F4H892_CELFA] DNA polymerase LigD, polymerase domain-containing protein
> stre:GZL_01248(337)31251.01066(622)4--    ATP-dependent DNA ligase
> cfl:Cfla_0584(354)32950.21065(532)5--     [tr:D5UIJ7_CELFN] DNA polymerase LigD, polymerase domain-containing protein
> cga:Celgi_0324(365)32750.51065(602)3--     [tr:F8A4N0_CELGA] DNA polymerase LigD, polymerase domain protein
> kal:KALB_6787(338)30850.31065(965)3--    hypothetical protein
> sen:SACE_1849(347)31448.71030(464)5--     [tr:A4FAT6_SACEN] DNA ligase (ATP)
> mid:MIP_00683(343)31351.81026(157)2--     [tr:J9W6I2_9MYCO] DNA ligase-like protein
> mne:D174_25760(350)31649.41024(132)4--     [tr:V5XH29_MYCNE] ATP-dependent DNA ligase
> xce:Xcel_1675(371)33449.41023(540)4--     [tr:D1BSK6_XYLCX] DNA polymerase LigD, polymerase domain-containing protein
> ami:Amir_1571(330)31549.21022()3--     [tr:C6WBF2_ACTMD] DNA polymerase LigD, polymerase domain-containing protein
> mie:LG41_01625(343)31351.41022(153)3--    ATP-dependent DNA ligase
> mia:OCU_03270(343)31351.11021(152)3--     [tr:H8ILS5_MYCIA] hypothetical protein
> mir:OCQ_03210(343)31351.11021(152)3--    hypothetical protein
> msa:Mycsm_06080(350)31550.21020(95)5--     [tr:L0J3V2_MYCSM] DNA polymerase LigD, polymerase domain protein
> mks:LG40_13460(345)31352.11018(146)4--    ATP-dependent DNA ligase
> mmm:W7S_01570(343)31350.81017(148)3--     [tr:I2A7M5_9MYCO] hypothetical protein
> myo:OEM_03300(343)31350.81017(148)3--     [tr:S4Z3B4_9MYCO] hypothetical protein
> mit:OCO_03170(343)31351.11015(146)3--    hypothetical protein
> mmi:MMAR_5265(346)32050.61015(119)2--     [tr:B2HLD7_MYCMM] hypothetical protein
> mabb:MASS_0282(346)32249.71011(98)2--     [tr:R4UG35_MYCAB] hypothetical protein
> mabl:MMASJCM_0276(346)32249.71011(98)2--    ATP-dependent DNA ligase
> mul:MUL_4339(346)32050.31011(118)2--     [tr:A0PVH4_MYCUA] hypothetical protein
> apn:Asphe3_38430(414)32747.71010(112)2-- K01971  ligD  [tr:F0M977_ARTPP] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mak:LH56_21075(342)32250.01009(98)2--    ATP-dependent DNA ligase
> mmv:MYCMA_0149(342)32250.01009(96)2--    ATP-dependent DNA ligase
> myc:NF90_21735(342)32250.01009(98)2--    ATP-dependent DNA ligase
> mys:NF92_21725(342)32250.01009(98)2--    ATP-dependent DNA ligase
> mabo:NF82_01410(342)32249.71006(119)3--    ATP-dependent DNA ligase
> may:LA62_01415(342)32249.71006(119)3--    ATP-dependent DNA ligase
> maz:LA61_01330(342)32249.71006(119)3--    ATP-dependent DNA ligase
> msb:LJ00_31150(349)31650.61003(104)3--    ATP-dependent DNA ligase
> msg:MSMEI_6136(349)31650.61003(104)3--    DNA primase small subunit (EC:6.5.1.1)
> msh:LI98_31160(349)31650.61003(104)3--    ATP-dependent DNA ligase
> msm:MSMEG_6301(350)31650.61003(104)3--     [tr:A0R5T1_MYCS2] ligD; DNA polymerase LigD polymerase subunit
> msn:LI99_31155(349)31650.61003(104)3--    ATP-dependent DNA ligase
... ... ...