GFIT result for
T00443
|
GFIT result for
T00443
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| nca:Noca_2445 (326 a.a.) |
-- |
[tr:A1SJG4_NOCSJ] putative DNA ligase (ATP), C-terminal | ||||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|---|
| > kfl:Kfla_5287(335) | 320 | 75.9 | 1740 | (699) | 4 | -- | [tr:D2PL46_KRIFD] DNA polymerase LigD, polymerase domain-containing protein | |||
| > afs:AFR_34555(319) | 322 | 72.7 | 1697 | (574) | 4 | -- | [tr:U5W830_9ACTO] DNA polymerase LigD, polymerase domain-containing protein | |||
| > actn:L083_6564(320) | 320 | 74.4 | 1685 | (607) | 2 | -- | [tr:R4LWM2_9ACTO] DNA polymerase LigD, polymerase domain-containing protein | |||
| > rha:RHA1_ro05237(323) | 317 | 74.1 | 1662 | (677) | 4 | -- | [tr:Q0S618_RHOJR] DNA ligase (ATP), C-terminal | |||
| > nml:Namu_0584(329) | 312 | 75.6 | 1659 | (784) | 4 | -- | [tr:C8X7D0_NAKMY] DNA polymerase LigD, polymerase domain-containing protein | |||
| > roa:Pd630_LPD01759(323) | 317 | 73.8 | 1655 | (673) | 3 | -- | putative ATP-dependent DNA ligase ykoU | |||
| > rop:ROP_52850(323) | 316 | 74.4 | 1652 | (685) | 4 | -- | [tr:C1AV42_RHOOB] hypothetical protein | |||
| > ncy:NOCYR_1435(316) | 313 | 74.8 | 1649 | (776) | 3 | -- | [tr:H6R7N7_NOCCG] putative DNA ligase (ATP), C-terminal | |||
| > nno:NONO_c59090(337) | 311 | 74.6 | 1637 | (835) | 3 | -- | ligD; putative DNA polymerase LigD | |||
| > amd:AMED_4612(314) | 305 | 76.1 | 1634 | (597) | 8 | -- | [tr:D8HVD8_AMYMU] lig; ATP-dependent DNA ligase | |||
| > amm:AMES_4557(314) | 305 | 76.1 | 1634 | (597) | 8 | -- | [tr:G0FMN1_AMYMS] lig; ATP-dependent DNA ligase | |||
| > amn:RAM_23480(314) | 305 | 76.1 | 1634 | (597) | 8 | -- | [tr:G0FMN1_AMYMS] ATP-dependent DNA ligase | |||
| > amz:B737_4557(314) | 305 | 76.1 | 1634 | (597) | 8 | -- | [tr:T1V2J7_AMYMD] lig; ATP-dependent DNA ligase | |||
| > nbr:O3I_009195(324) | 312 | 75.0 | 1634 | (781) | 6 | -- | [tr:K0ESM6_9NOCA] putative DNA ligase (ATP), C-terminal | |||
| > sesp:BN6_43600(362) | 317 | 72.6 | 1633 | (542) | 6 | -- | [tr:K0K258_SACES] hypothetical protein | |||
| > bcv:Bcav_0664(334) | 328 | 70.7 | 1620 | (591) | 4 | -- | [tr:C5BY32_BEUC1] DNA polymerase LigD, polymerase domain-containing protein | |||
| > mph:MLP_05970(315) | 313 | 73.5 | 1616 | (688) | 3 | -- | [tr:F5XKS3_MICPN] hypothetical protein | |||
| > amq:AMETH_2185(309) | 312 | 74.4 | 1614 | (500) | 7 | -- | lig; DNA polymerase LigD, polymerase domain-containing protein | |||
| > asd:AS9A_4216(304) | 304 | 72.7 | 1613 | (828) | 2 | -- | [tr:F6EKA8_AMYSD] DNA polymerase LigD, polymerase domain-containing protein | |||
| > nfa:nfa13650(320) | 321 | 72.6 | 1607 | (738) | 3 | -- | [tr:Q5Z031_NOCFA] hypothetical protein | |||
| > ica:Intca_1898(322) | 322 | 70.5 | 1606 | (949) | 5 | -- | [tr:E6SBC1_INTC7] DNA polymerase LigD, polymerase domain-containing protein | |||
| > pdx:Psed_4714(323) | 323 | 72.1 | 1600 | (563) | 6 | -- | [tr:F4D173_PSEUX] DNA primase small subunit | |||
| > ams:AMIS_67600(313) | 315 | 72.4 | 1598 | (506) | 3 | -- | [tr:I0HG43_ACTM4] hypothetical protein | |||
| > ase:ACPL_7020(319) | 317 | 71.9 | 1596 | (517) | 3 | -- | [tr:G8SFA9_ACTS5] DNA ligase (ATP) (EC:6.5.1.1) | |||
| > rpy:Y013_00825(312) | 307 | 73.3 | 1585 | (603) | 2 | -- | [tr:V9XDE7_9NOCA] ATP-dependent DNA ligase | |||
| > gbr:Gbro_3272(328) | 321 | 70.4 | 1576 | (676) | 3 | -- | [tr:D0LCY3_GORB4] DNA polymerase LigD | |||
| > gor:KTR9_3313(329) | 324 | 70.4 | 1574 | (680) | 2 | -- | [tr:J9SN86_9ACTO] putative eukaryotic-type DNA primase | |||
| > aja:AJAP_17045(312) | 315 | 71.7 | 1569 | (514) | 5 | -- | Hypothetical protein | |||
| > aoi:AORI_4365(306) | 307 | 72.6 | 1544 | (470) | 7 | -- | [tr:R4SWR1_AMYOR] lig; DNA ligase (ATP) | |||
| > gpo:GPOL_c30660(318) | 311 | 69.8 | 1530 | (607) | 3 | -- | [tr:H6MVI7_GORPV] ligD; DNA polymerase LigD | |||
| > tpr:Tpau_2946(314) | 320 | 65.9 | 1446 | (570) | 2 | -- | [tr:D5UU41_TSUPD] DNA polymerase LigD, polymerase domain-containing protein | |||
| > ace:Acel_1378(339) | 314 | 61.1 | 1285 | (715) | 2 | -- | [tr:A0LUP0_ACIC1] hypothetical protein | |||
| > sve:SVEN_6395(343) | 317 | 55.5 | 1175 | (667) | 4 | -- | [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1) | |||
| > sro:Sros_6714(334) | 317 | 53.3 | 1166 | () | 0 | -- | [tr:D2B5B8_STRRD] DNA primase small subunit | |||
| > sct:SCAT_5514(335) | 312 | 54.5 | 1163 | (715) | 8 | -- | [tr:F8JRK1_STREN] hypothetical protein | |||
| > scy:SCATT_55170(335) | 312 | 54.5 | 1163 | (715) | 8 | -- | [tr:F8JRK1_STREN] hypothetical protein | |||
| > ssx:SACTE_5877(337) | 311 | 54.7 | 1161 | (654) | 2 | -- | [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain-containing protein | |||
| > scb:SCAB_13581(336) | 313 | 54.3 | 1154 | (664) | 4 | -- | [tr:C9Z887_STRSW] hypothetical protein | |||
| > tbi:Tbis_2258(332) | 315 | 52.4 | 1154 | (642) | 1 | -- | [tr:D6Y393_THEBD] DNA polymerase LigD ligase domain-containing protein | |||
| > sgu:SGLAU_28045(336) | 313 | 54.6 | 1145 | (659) | 2 | -- | hypothetical protein | |||
| > saq:Sare_1486(341) | 317 | 55.2 | 1138 | (41) | 6 | -- | [tr:A8LUN1_SALAI] DNA polymerase LigD polymerase subunit | |||
| > sfa:Sfla_0696(336) | 311 | 52.7 | 1138 | (648) | 4 | -- | [tr:E8WAH3_STRFA] DNA polymerase LigD, polymerase domain-containing protein | |||
| > strp:F750_6168(336) | 311 | 52.7 | 1138 | (643) | 4 | -- | [tr:M9U686_9ACTO] ATP-dependent DNA ligase (EC:6.5.1.1) | |||
| > sfi:SFUL_6474(345) | 312 | 53.8 | 1135 | (625) | 3 | -- | [tr:N0CZ27_9ACTO] eukaryotic-type DNA primase (EC:6.5.1.1) | |||
| > sdv:BN159_1715(338) | 313 | 54.0 | 1134 | (659) | 3 | -- | [tr:K4R0C7_9ACTO] DNA polymerase LigD, polymerase domain-containing protein | |||
| > sci:B446_30625(347) | 313 | 53.7 | 1133 | (643) | 4 | -- | [tr:S5VCP0_STRCU] hypothetical protein | |||
| > sma:SAV_1696(338) | 313 | 53.0 | 1130 | (628) | 1 | -- | [tr:Q82MG4_STRAW] hypothetical protein | |||
| > sgr:SGR_1023(345) | 312 | 53.8 | 1128 | (619) | 1 | -- | [tr:B1VU08_STRGG] hypothetical protein | |||
| > stp:Strop_2095(360) | 328 | 53.0 | 1125 | (38) | 5 | -- | [tr:A4X6P6_SALTO] DNA primase, small subunit | |||
| > mil:ML5_1895(341) | 316 | 55.4 | 1124 | (54) | 6 | -- | [tr:E8SBZ0_MICSL] DNA polymerase ligd, polymerase domain-containing protein | |||
| > src:M271_07565(334) | 312 | 53.5 | 1124 | (607) | 10 | -- | ATP-dependent DNA ligase | |||
| > mau:Micau_1636(341) | 315 | 54.9 | 1123 | (55) | 6 | -- | [tr:D9SZQ9_MICAI] DNA polymerase LigD polymerase subunit | |||
| > svl:Strvi_3580(334) | 312 | 53.5 | 1120 | (588) | 9 | -- | [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain-containing protein | |||
| > sco:SCO6709(341) | 313 | 52.7 | 1115 | (614) | 2 | -- | [tr:Q9XAM1_STRCO] SC4C6.19; hypothetical protein | |||
| > slv:SLIV_04965(341) | 313 | 52.7 | 1115 | (630) | 2 | -- | hypothetical protein | |||
| > vma:VAB18032_12780(341) | 323 | 53.6 | 1114 | (48) | 8 | -- | [tr:F4FDY9_VERMA] DNA primase, small subunit | |||
| > salb:XNR_0333(339) | 307 | 52.8 | 1107 | (624) | 4 | -- | [tr:D6AZX1_9ACTO] DNA polymerase LigD, polymerase domain-containing protein | |||
| > sho:SHJGH_7372(335) | 312 | 52.2 | 1102 | (611) | 4 | -- | [tr:M1N8F1_STRHY] hypothetical protein | |||
| > shy:SHJG_7611(335) | 312 | 52.2 | 1102 | (611) | 4 | -- | [tr:H2JQM4_STRHJ] hypothetical protein | |||
| > sbh:SBI_08909(334) | 310 | 52.9 | 1101 | (610) | 1 | -- | [tr:D7BZY7_STRBB] hypothetical protein | |||
| > salu:DC74_7354(337) | 312 | 51.9 | 1077 | (617) | 5 | -- | hypothetical protein | |||
| > cfi:Celf_0509(356) | 328 | 49.7 | 1070 | (538) | 4 | -- | [tr:F4H892_CELFA] DNA polymerase LigD, polymerase domain-containing protein | |||
| > cfl:Cfla_0584(354) | 329 | 50.2 | 1065 | (532) | 5 | -- | [tr:D5UIJ7_CELFN] DNA polymerase LigD, polymerase domain-containing protein | |||
| > cga:Celgi_0324(365) | 327 | 50.5 | 1065 | (602) | 3 | -- | [tr:F8A4N0_CELGA] DNA polymerase LigD, polymerase domain protein | |||
| > kal:KALB_6787(338) | 308 | 50.3 | 1065 | (965) | 3 | -- | hypothetical protein | |||
| > sen:SACE_1849(347) | 314 | 48.7 | 1030 | (464) | 5 | -- | [tr:A4FAT6_SACEN] DNA ligase (ATP) | |||
| > mid:MIP_00683(343) | 313 | 51.8 | 1026 | (157) | 2 | -- | [tr:J9W6I2_9MYCO] DNA ligase-like protein | |||
| > mne:D174_25760(350) | 316 | 49.4 | 1024 | (132) | 4 | -- | [tr:V5XH29_MYCNE] ATP-dependent DNA ligase | |||
| > xce:Xcel_1675(371) | 334 | 49.4 | 1023 | (540) | 4 | -- | [tr:D1BSK6_XYLCX] DNA polymerase LigD, polymerase domain-containing protein | |||
| > ami:Amir_1571(330) | 315 | 49.2 | 1022 | () | 3 | -- | [tr:C6WBF2_ACTMD] DNA polymerase LigD, polymerase domain-containing protein | |||
| > mie:LG41_01625(343) | 313 | 51.4 | 1022 | (153) | 3 | -- | ATP-dependent DNA ligase | |||
| > mia:OCU_03270(343) | 313 | 51.1 | 1021 | (152) | 3 | -- | [tr:H8ILS5_MYCIA] hypothetical protein | |||
| > mir:OCQ_03210(343) | 313 | 51.1 | 1021 | (152) | 3 | -- | [tr:H8JC30_MYCIT] hypothetical protein | |||
| > msa:Mycsm_06080(350) | 315 | 50.2 | 1020 | (95) | 5 | -- | [tr:L0J3V2_MYCSM] DNA polymerase LigD, polymerase domain protein | |||
| > mmm:W7S_01570(343) | 313 | 50.8 | 1017 | (148) | 3 | -- | [tr:I2A7M5_9MYCO] hypothetical protein | |||
| > myo:OEM_03300(343) | 313 | 50.8 | 1017 | (148) | 3 | -- | [tr:S4Z3B4_9MYCO] hypothetical protein | |||
| > mit:OCO_03170(343) | 313 | 51.1 | 1015 | (146) | 3 | -- | [tr:H8IZY4_MYCIT] hypothetical protein | |||
| > mmi:MMAR_5265(346) | 320 | 50.6 | 1015 | (119) | 2 | -- | [tr:B2HLD7_MYCMM] hypothetical protein | |||
| > mabb:MASS_0282(346) | 322 | 49.7 | 1011 | (98) | 2 | -- | [tr:R4UG35_MYCAB] hypothetical protein | |||
| > mul:MUL_4339(346) | 320 | 50.3 | 1011 | (118) | 2 | -- | [tr:A0PVH4_MYCUA] hypothetical protein | |||
| > apn:Asphe3_38430(414) | 327 | 47.7 | 1010 | (112) | 2 | -- | K01971 | ligD | [tr:F0M977_ARTPP] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mak:LH56_21075(342) | 322 | 50.0 | 1009 | (98) | 2 | -- | ATP-dependent DNA ligase | |||
| > mmv:MYCMA_0149(342) | 322 | 50.0 | 1009 | (96) | 2 | -- | [tr:I6ZB81_MYCAB] ATP-dependent DNA ligase | |||
| > mabo:NF82_01410(342) | 322 | 49.7 | 1006 | (119) | 3 | -- | ATP-dependent DNA ligase | |||
| > may:LA62_01415(342) | 322 | 49.7 | 1006 | (119) | 3 | -- | ATP-dependent DNA ligase | |||
| > maz:LA61_01330(342) | 322 | 49.7 | 1006 | (119) | 3 | -- | ATP-dependent DNA ligase | |||
| > msb:LJ00_31150(349) | 316 | 50.6 | 1003 | (104) | 3 | -- | ATP-dependent DNA ligase | |||
| > msg:MSMEI_6136(349) | 316 | 50.6 | 1003 | (104) | 3 | -- | DNA primase small subunit (EC:6.5.1.1) | |||
| > msh:LI98_31160(349) | 316 | 50.6 | 1003 | (104) | 3 | -- | ATP-dependent DNA ligase | |||
| > msm:MSMEG_6301(350) | 316 | 50.6 | 1003 | (104) | 3 | -- | [tr:A0R5T1_MYCS2] ligD; DNA polymerase LigD polymerase subunit | |||
| > msn:LI99_31155(349) | 316 | 50.6 | 1003 | (104) | 3 | -- | ATP-dependent DNA ligase | |||
| > mkn:MKAN_13620(345) | 313 | 50.8 | 1001 | (129) | 3 | -- | [tr:U5WQH5_MYCKA] ATP-dependent DNA ligase | |||
| > ach:Achl_3206(414) | 327 | 48.0 | 1000 | (67) | 2 | -- | [tr:B8HFX4_ARTCA] DNA polymerase LigD, polymerase domain-containing protein | |||
| > trs:Terro_4019(457) | 307 | 49.5 | 997 | (552) | 2 | -- | [tr:I3ZLV9_TERRK] putative DNA primase | |||
| > bsd:BLASA_3263(355) | 330 | 46.4 | 996 | (487) | 5 | -- | [tr:H6RR51_BLASD] DNA polymerase LigD | |||
| > aau:AAur_2008(414) | 318 | 47.5 | 995 | (81) | 3 | -- | K01971 | ligD | [tr:A1R691_ARTAT] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > arr:ARUE_c21610(414) | 318 | 47.5 | 995 | (139) | 5 | -- | K01971 | ligD | [tr:J7LNU1_9MICC] DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cwo:Cwoe_3833(380) | 306 | 49.3 | 994 | (498) | 8 | -- | [tr:D3F2I4_CONWI] DNA primase small subunit | |||
| > req:REQ_42490(348) | 329 | 48.6 | 994 | (541) | 1 | -- | [tr:E4W9U1_RHOE1] hypothetical protein | |||
| > art:Arth_3426(414) | 327 | 47.4 | 993 | (102) | 5 | -- | [tr:A0K0I1_ARTS2] hypothetical protein | |||