GFIT result for
nfa
|
GFIT result for
nfa
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| nfa:NFA_6770 (808 a.a.) |
-- |
K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > nfr:ERS450000_03433(807) | 808 | 98.9 | 5425 | 19 | <> | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngp:LTT66_16680(773) | 805 | 76.8 | 4126 | 11 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nie:KV110_04130(779) | 808 | 73.9 | 4045 | 7 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noz:DMB37_24770(777) | 809 | 74.4 | 4016 | 7 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nbr:O3I_003805(771) | 808 | 73.8 | 3994 | 10 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nspu:IFM12276_04210(765) | 805 | 74.9 | 3992 | 0 | <> | putative ATP-dependent DNA ligase | |||
| > ncy:NOCYR_0694(786) | 807 | 73.2 | 3938 | 8 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nah:F5544_03785(752) | 806 | 74.2 | 3934 | 9 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nwl:NWFMUON74_06820(752) | 809 | 71.0 | 3830 | 9 | <- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nno:NONO_c07420(763) | 805 | 69.7 | 3774 | 12 | <- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nya:LTV02_27790(757) | 808 | 70.2 | 3773 | 7 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nad:NCTC11293_01484(753) | 802 | 69.6 | 3726 | 12 | <> | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nod:FOH10_27575(764) | 808 | 69.6 | 3724 | 9 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nsr:NS506_07750(754) | 808 | 68.7 | 3694 | 9 | <- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nyu:D7D52_05525(?) | 809 | 68.5 | 3694 | 0 | -- | - | |||
| > nhu:H0264_05025(764) | 811 | 68.3 | 3671 | 11 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ntp:CRH09_04330(763) | 818 | 67.1 | 3642 | 10 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ntc:KHQ06_02615(752) | 808 | 68.3 | 3624 | 9 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nsl:BOX37_03275(755) | 802 | 68.1 | 3623 | 9 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spin:KV203_14640(792) | 799 | 63.5 | 3249 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhw:BFN03_13610(767) | 794 | 61.2 | 3111 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rby:CEJ39_07450(784) | 798 | 59.9 | 3092 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rko:JWS14_27805(765) | 793 | 61.2 | 3089 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roa:Pd630_LPD01566(759) | 793 | 61.0 | 3088 | 12 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrt:4535765_00993(783) | 796 | 59.7 | 3088 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roz:CBI38_06865(757) | 791 | 61.4 | 3085 | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rha:RHA1_ro05048(766) | 793 | 61.0 | 3084 | 12 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpsk:JWS13_16785(765) | 795 | 60.8 | 3079 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpy:Y013_20910(802) | 815 | 58.9 | 3069 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rgor:NMQ04_04360(773) | 795 | 60.1 | 3066 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rop:ROP_51120(758) | 791 | 60.7 | 3065 | 9 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rcr:NCTC10994_01747(757) | 795 | 59.0 | 3059 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhq:IM25_10720(792) | 805 | 59.3 | 3059 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rtm:G4H71_05705(763) | 809 | 58.3 | 3001 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdef:P9209_26800(745) | 795 | 59.0 | 3000 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > req:REQ_10780(746) | 799 | 58.8 | 2966 | 4 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rav:AAT18_06535(753) | 810 | 58.0 | 2964 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrz:CS378_21645(753) | 810 | 58.0 | 2962 | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rqi:C1M55_22740(760) | 793 | 57.4 | 2955 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhod:AOT96_02785(760) | 793 | 57.4 | 2951 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > reb:XU06_21400(758) | 793 | 57.5 | 2945 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rey:O5Y_21290(760) | 793 | 57.4 | 2944 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rer:RER_45220(758) | 793 | 57.3 | 2941 | 4 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhs:A3Q41_01804(771) | 795 | 56.5 | 2935 | 5 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rfa:A3L23_01552(768) | 795 | 56.7 | 2934 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rgo:KYT97_29675(756) | 794 | 57.1 | 2920 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhb:NY08_3398(756) | 794 | 56.0 | 2882 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhop:D8W71_05050(?) | 797 | 55.7 | 2875 | 0 | -- | - | |||
| > rhu:A3Q40_03914(765) | 815 | 54.1 | 2723 | 4 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msao:MYCSP_04450(780) | 814 | 54.2 | 2721 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > miz:BAB75_05505(779) | 805 | 55.0 | 2711 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mdr:MDOR_30740(758) | 806 | 53.5 | 2692 | 5 | -- | K01971 | ligD | ligD_1; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mxe:MYXE_12360(767) | 823 | 53.2 | 2692 | 9 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mabb:MASS_1028(783) | 809 | 54.3 | 2682 | 6 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmeh:M5I08_07230(750) | 802 | 54.2 | 2674 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mabl:MMASJCM_1059(783) | 809 | 54.0 | 2673 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > many:MANY_29550(755) | 802 | 52.9 | 2669 | 5 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mauu:NCTC10437_04631(755) | 803 | 53.8 | 2668 | 8 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mye:AB431_24205(762) | 808 | 53.2 | 2668 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mfg:K6L26_07475(759) | 803 | 53.1 | 2666 | 5 | -- | ATP-dependent DNA ligase | |||
| > mvq:MYVA_4735(759) | 808 | 53.5 | 2666 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mbrd:MBRA_25230(753) | 805 | 53.8 | 2665 | 9 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mpae:K0O64_23905(766) | 812 | 53.1 | 2664 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mll:B1R94_23495(759) | 808 | 53.1 | 2660 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msen:K3U95_23345(756) | 803 | 53.1 | 2658 | 5 | -- | ATP-dependent DNA ligase | |||
| > mmam:K3U93_19955(774) | 802 | 54.2 | 2657 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mcro:MI149_24330(766) | 812 | 53.0 | 2656 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mab:MAB_1033(750) | 801 | 53.9 | 2654 | 6 | -- | K01971 | ligD | Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msei:MSEDJ_59020(755) | 803 | 53.7 | 2654 | 8 | -- | K01971 | ligD | ligD_2; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mwu:PT015_13040(?) | 797 | 53.5 | 2654 | 0 | -- | - | |||
| > msa:Mycsm_05316(761) | 809 | 53.6 | 2653 | 9 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mcb:Mycch_4291(748) | 803 | 53.3 | 2651 | 6 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mche:BB28_05145(783) | 809 | 53.6 | 2650 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mseo:MSEO_29040(752) | 802 | 53.5 | 2647 | 7 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mfj:MFLOJ_45500(759) | 810 | 53.2 | 2645 | 5 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mky:IWGMT90018_52690(758) | 806 | 53.0 | 2645 | 0 | -- | ligD; multifunctional non-homologous end joining protein LigD | |||
| > mste:MSTE_01004(758) | 809 | 53.6 | 2645 | 3 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mav:MAV_1056(766) | 819 | 52.7 | 2643 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mbok:MBOE_23910(758) | 803 | 53.3 | 2643 | 6 | -- | ligD_2; multifunctional non-homologous end joining protein LigD | |||
| > mlw:MJO58_22900(752) | 803 | 54.2 | 2641 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmv:MYCMA_0544(750) | 801 | 53.9 | 2641 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msak:MSAS_24590(751) | 804 | 53.5 | 2640 | 7 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mgor:H0P51_23475(755) | 806 | 52.9 | 2638 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > marz:MARA_51400(776) | 820 | 53.8 | 2637 | 9 | -- | K01971 | ligD | ligD_2; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mflv:NCTC10271_00861(752) | 807 | 53.3 | 2637 | 7 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmi:MMAR_4573(770) | 826 | 53.0 | 2636 | 7 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msal:DSM43276_00905(758) | 809 | 53.2 | 2635 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mthn:4412656_03803(766) | 813 | 54.1 | 2635 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mgi:Mflv_1828(766) | 817 | 53.1 | 2634 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msp:Mspyr1_12280(766) | 817 | 53.1 | 2634 | 8 | -- | K01971 | ligD | DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhek:JMUB5695_01168(767) | 824 | 52.5 | 2633 | 8 | -- | K01971 | ligD | ligD_1; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhas:MHAS_03407(755) | 807 | 53.8 | 2632 | 8 | -- | K01971 | ligD | ligD_1; Multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmae:MMARE11_43850(770) | 826 | 52.9 | 2631 | 7 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > malv:MALV_45830(759) | 803 | 53.3 | 2630 | 7 | -- | K01971 | ligD | ligD_2; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mft:XA26_13320(758) | 806 | 53.1 | 2630 | 6 | -- | K01971 | ligD | ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mao:MAP4_2980(764) | 819 | 52.6 | 2628 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mavi:RC58_14795(764) | 819 | 52.6 | 2628 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mavu:RE97_14820(764) | 819 | 52.6 | 2628 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mpa:MAP_0880(764) | 819 | 52.6 | 2628 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mpse:MPSD_47400(770) | 826 | 52.9 | 2626 | 6 | -- | K01971 | ligD | ligD; multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |