GFIT result for T00348

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

nha:Nham_0448
(866 a.a.)
 
--
 
K01971  ligD  [tr:Q1QR09_NITHX] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> nwi:Nwi_0353(913)87584.14939(4749)3<> K01971  ligD  [tr:Q3SVS1_NITWN] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpc:RPC_3685(911)87066.93905(3670)7-- K01971  ligD  [tr:Q210G6_RHOPB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bra:BRADO5823(904)86966.43904(3599)3-- K01971  ligD  [tr:A4Z011_BRASO] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)87466.23878(3551)4-- K01971  ligD  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_6329(895)86565.73847(3313)6-- K01971  ligD  [tr:A5EQ03_BRASB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:bll6773(892)86565.03845(3171)11-- K01971  ligD  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brs:S23_15390(889)86565.33844(3542)3-- K01971  ligD  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpb:RPB_1876(914)88365.03844(3609)12-- K01971  ligD  [tr:Q2IYX6_RHOP2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_12895(888)86565.03828(3168)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_26450(888)86565.03828(3168)10-- K01971  ligD  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)87665.33821(3552)14-- K01971  ligD  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpd:RPD_3490(930)89064.03815(3148)11-- K01971  ligD  [tr:Q133M6_RHOPS] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpt:Rpal_4171(914)87565.03812(3145)14-- K01971  ligD  [tr:B3QGJ0_RHOPT] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpa:RPA3650(914)87664.73803(3562)9-- K01971  ligD  [tr:Q6N3P3_RHOPA] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpe:RPE_3724(907)87764.83767(3574)4-- K01971  ligD  [tr:Q07K81_RHOP5] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)87063.43701(3471)1-- K01971  ligD  [tr:B6JFK1_OLICO] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)87063.43701(3471)1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)87063.43701(3471)1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)87063.13673(1505)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)86963.43668(1637)6-- K01971  ligD  [tr:Q7D410_AGRFC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)87462.93647(2876)6-- K01971  ligD  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5638(882)87063.63632(24)6-- K01971  ligD  [tr:C6B958_RHILS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)86762.43630(1454)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)86762.53626(2837)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)86763.13625(2041)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)86962.03612(2858)7-- K01971  ligD  [tr:B6A397_RHILW] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)87061.73608(2902)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)86962.43608(2970)4-- K01971  ligD  [tr:B8EKE2_METSB] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)86762.23608(1427)15-- K01971  ligD  [tr:F7XBX2_SINMM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)86963.23605(1413)13-- K01971  ligD  [tr:Q98P39_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)86762.43602(2820)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)86761.93601(1420)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)86761.73588(1407)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)86762.53584(2906)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)86761.83579(2783)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)86862.93577(3332)5-- K01971  ligD  [tr:A7INJ2_XANP2] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)86962.33575(1970)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)86962.13570(1964)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)86761.63566(2771)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)86761.73564(2748)7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)86961.73563(1397)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)87058.73412(3153)5-- K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)89958.13382(3147)4-- K01971  ligD  [tr:B0T3L2_CAUSK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_pLPU83d1032(879)86759.73382(1085)13-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pzu:PHZ_c3259(887)87158.03273(2155)18-- K01971  ligD  [tr:B4RAS0_PHEZH] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsb:Bresu_0521(859)87150.52778(2534)7-- K01971  ligD  [tr:D9QKL0_BRESC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)93043.32256(2055)10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)87643.82250(1500)3-- K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)86343.92249(527)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_b04710(850)87045.32241(85)7-- K01971  ligD  [tr:Q6W1H3_RHISN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c16580(850)86944.92222(119)8-- K01971  ligD ykoU2; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)88144.52215(1979)8-- K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)87142.92213(522)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)87044.02199(515)6-- K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)87043.62189(1478)3-- K01971  ligD  [tr:Q11J79_CHESB] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)85643.82181(216)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)85643.82181(216)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)85643.82181(456)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)88043.02180(1987)1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)85643.72173(448)5-- K01971  ligD DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msc:BN69_1443(852)86842.72166(1952)5-- K01971  ligD  [tr:J7Q463_METSZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)83843.82165(436)3-- K01971  ligD putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)87544.72164(1892)6-- K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)86843.92163(2039)7-- K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)86842.42154(1445)3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)87742.62151(456)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI_0169(856)86843.42134(2010)4-- K01971  ligD DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)86743.82131(1898)1-- K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)86742.42128(1486)3-- K01971  ligD  [tr:A0A068STE9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)87143.42120(1499)2-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)87143.42120(1892)1-- K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)86741.52098(1986)0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gma:AciX8_1368(920)84441.62081(1867)2-- K01971  ligD  [tr:G8NZZ5_GRAMM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmj:BMULJ_06021(927)90641.42040(1905)13-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmu:Bmul_5476(927)90641.42040(1285)14-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmk:DM80_5695(927)90641.32029(1911)11-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpy:Bphyt_1858(940)90038.72028(1766)3-- K01971  ligD  [tr:B2T3V5_BURPP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)91338.92026(1922)3-- K01971  ligD  [tr:F3YU59_DESAF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmul:NP80_5544(926)90241.12024(1897)13-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssan:NX02_27130(831)87042.12023(259)6-- K01971  ligD  [tr:W0AKE6_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)87538.92019(1911)1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcn:Bcen_1346(936)90440.72013(1911)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:RALTA_B2120(916)88140.22013(200)19-- K01971  ligD  [tr:B3RCS2_CUPTR] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bch:Bcen2424_6483(936)90440.72010(1254)6-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)88440.62006(1892)5-- K01971  ligD  [tr:D8NY76_RALSL] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)89140.12003(1703)10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bceo:I35_7581(928)89540.42001(1880)7-- K01971  ligD  [tr:G7HQX3_9BURK] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buo:BRPE64_ACDS15530(909)88239.62001(1758)2-- K01971  ligD  [tr:R4WYK7_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)88840.02001(1697)8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsh:Rsph17029_1337(868)88940.01999(1700)6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsa:AciPR4_1657(957)86739.01997(1789)12-- K01971  ligD  [tr:E8V3A7_TERSS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bue:BRPE67_ACDS15580(907)88239.51996(653)3-- K01971  ligD  [tr:A0A060P483_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcew:DM40_5175(957)91639.81991(1873)16-- K01971  ligD  [tr:A0A088ULI3_9BURK] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)87640.81991(1223)1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pst:PSPTO_3464(851)86440.51988(1809)3-- K01971  ligD  [tr:Q87ZG5_PSESM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpe:Varpa_0532(869)88440.61984(119)9-- K01971  ligD  [tr:E6V5E7_VARPE] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)86640.21983(1761)1-- K01971  ligD  [tr:A0A0D5AP76_9RALS] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)90040.31982(1694)85-- K01971  ligD  [tr:A1TQ54_ACIAC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bced:DM42_7098(948)90739.61982(1868)8-- K01971  ligD  [tr:A0A088V2D2_BURCE] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> byi:BYI23_A015080(904)88339.81982(628)2-- K01971  ligD  [tr:G8M3M4_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...