GFIT result for T01431

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

pbs:Plabr_0882
(147 a.a.)
 
--
 
    [tr:F0SIB6_RUBBR] putative ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ipa:Isop_0204(159)14841.2310
0--     [tr:E8QWB4_ISOPI] hypothetical protein
> saci:Sinac_6085(122)13539.3245
0->     [tr:L0DMY7_SINAD] hypothetical protein
> psl:Psta_2104(135)12938.8215
0--     [tr:D2R1Q9_PIRSD] putative ATP-dependent DNA ligase
> sphk:SKP52_18625(835)15931.4205
3-- K01971  ligD  [tr:A0A0A7PKR9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_165(187)15631.4197
0-- K01971  ligD  [tr:V6DH24_9DELT] DNA ligase D 3'-phosphoesterase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smag:AN936_21285(838)15930.2193
0-- K01971  ligD  [tr:A0A0N9UH36_SPHMC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amx:AM2010_2477(849)14729.3192
1-- K01971  ligD  [tr:A0A0G3XBK9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cij:WG74_06635(829)15129.1191
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cna:AB433_09865(843)14628.8191
2-- K01971  ligD  [tr:A0A0G3XHX8_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)14729.9190
1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ery:CP97_13080(841)14630.1190
1-- K01971  ligD  [tr:A0A0H4VEJ1_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nbr:O3I_003805(771)13331.6189(87)10-- K01971  ligD  [tr:K0EP06_9NOCA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphp:LH20_17000(837)15828.5189
0-- K01971  ligD  [tr:A0A0M4D143_SPHS1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mek:MSKOL_2512(151)13132.1188
0--     [tr:A0A0E3QDP1_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> mvc:MSVAZ_2500(151)13132.1188
0--     [tr:A0A0E3Q788_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> sphi:TS85_18230(810)15328.8188
3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> barc:AOA65_0304(127)13233.3184
0--     [tr:A0A0N8PWZ1_9ARCH] ATP-dependent DNA ligase
> eli:ELI_04125(839)15230.3184(81)2-- K01971  ligD  [tr:Q2NBM4_ERYLH] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)15432.5184(31)13-- K01971  ligD  [tr:Q98P39_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)15728.7184
1-- K01971  ligD  [tr:Q2G7N8_NOVAD] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nco:AAW31_04750(205)15330.1184
0-- K01971  ligD  [tr:A0A0F7KCD4_9PROT] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsq:Rsph17025_1218(846)14033.6184
5-- K01971  ligD  [tr:A4WRV5_RHOS5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_02590(830)15733.8183(6)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tye:THEYE_A0546(138)13531.1183
0--     [tr:B5YJH4_THEYD] ligD; DNA ligase D, 3'-phosphoesterase domain
> mbar:MSBR2_2357(151)13132.1182
0--     [tr:A0A0E3R5N8_METBA] ATP-dependent DNA ligase (EC:6.5.1.1)
> ssy:SLG_04290(835)14530.3182(80)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)15633.3180
6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)15633.3180
5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)15229.6180(20)7-- K01971  ligD  [tr:C3MIG9_RHISN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mev:Metev_0789(152)13229.5179
0--     [tr:D7E8L8_METEZ] DNA ligase D, 3'-phosphoesterase domain protein
> acp:A2cp1_0935(789)13731.4178(58)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mba:Mbar_A2115(151)13131.3178
1--     [tr:Q46AP6_METBF] conserved hypothetical protein
> mbw:MSBRW_2627(151)13131.3178
1--     [tr:A0A0E3QP27_METBA] ATP-dependent DNA ligase (EC:6.5.1.1)
> min:Minf_2347(133)13631.6178
0--     [tr:B3E0H2_METI4] cdc9; ATP-dependent DNA ligase
> sfh:SFHH103_02797(865)15328.8178(26)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)13731.4177(57)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdt:HYPDE_32328(578)14231.0177
0-- K01971  ligD  [tr:N0B3Q2_9RHIZ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mef:MSWH1_1559(152)13131.3177
0--     [tr:A0A0E3NQF6_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> meq:MSWHS_1751(152)13131.3177
0--     [tr:A0A0E3NKE0_9EURY] ATP-dependent DNA ligase (EC:6.5.1.1)
> mmh:Mmah_0746(152)13234.1177
0--     [tr:D5EAR9_METMS] DNA ligase D, 3'-phosphoesterase domain protein
> rle:pRL120229(881)15831.6177
5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbg:BN140_1383(187)15631.4176
0--     [tr:I7KCW4_METBM] lig5; DNA ligase (ATP) (EC:6.5.1.1)
> mby:MSBRM_2391(151)13131.3176
0--     [tr:A0A0E3QVE8_METBA] ATP-dependent DNA ligase (EC:6.5.1.1)
> ccx:COCOR_00956(852)14430.6175
7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> mno:Mnod_7647(544)15130.5175
3-- K01971  ligD  [tr:B8IQT3_METNO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)15932.1175
8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcv:Bcav_0653(816)15129.1174(69)9-- K01971  ligD  [tr:C5BY21_BEUC1] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> boa:Bovatus_00603(205)14327.3174
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxy:BXY_06310(205)14327.3174
0--     [tr:D6D754_9BACE] DNA ligase D, 3'-phosphoesterase domain (EC:6.5.1.1)
> rec:RHECIAT_PA0000197(882)15932.1174(6)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] putative ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)15932.1174
6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)15831.6174
8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)15831.6174(5)6-- K01971  ligD  [tr:C6B636_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsh:Rsph17029_1337(868)15432.5174
6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)15432.5174
8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)15128.5174
4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14700(857)15228.9173(6)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdn:Hden_1070(562)15829.7173(54)0-- K01971  ligD  [tr:D8JV68_HYPDA] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> malg:MALG_00291(814)15130.5173
2-- K01971  ligD  [tr:A0A0H4KR85_9RHOB] DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)16032.5173(18)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)16032.5173(18)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)16032.5173(18)15-- K01971  ligD  [tr:F7XBX2_SINMM] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)15628.2172
1-- K01971  ligD  [tr:A0A0H4PQK2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)15632.1172
6-- K01971  ligD  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)15228.9172(11)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_4303(817)16031.9172(15)5--     [tr:A6UHH8_SINMW] DNA ligase D
> ssan:NX02_27130(831)15925.8172
6-- K01971  ligD  [tr:W0AKE6_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)16033.1170
10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kcr:Kcr_0736(117)13329.3170
0--     [tr:B1L4V6_KORCO] ATP-dependent DNA ligase, N-terminal domain protein
> sme:SMa0414(556)16032.5170(15)7-- K01971  ligD  [tr:Q930H5_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_a0414(556)16032.5170(15)7-- K01971  ligD  [tr:M4MF20_SINM2] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)15629.5170
1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)15731.8169
3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gor:KTR9_4500(793)13732.8169
6-- K01971  ligD  [tr:J9SQC7_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mts:MTES_3162(825)15430.5169
13-- K01971  ligD  [tr:E8NC83_MICTS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ncy:NOCYR_0694(786)14530.3169
8-- K01971  ligD  [tr:H6QYV3_NOCCG] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)14032.9169
10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_3982(837)14529.7169
7-- K01971  ligD  [tr:A5VDG1_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0884(726)13730.7168(43)346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)15331.4168
4-- K01971  ligD  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chel:AL346_19410(846)13933.1168
4-- K01971  ligD  [tr:A0A0K2DH57_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)15129.8168
2-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)15129.8168(67)1-- K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)15731.2168
5-- K01971  ligD  [tr:A7INJ2_XANP2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)15632.1167(2)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu4632(771)15731.2167(1)5-- K01971  ligD  [tr:A9CGX3_AGRFC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)15627.6167
1-- K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)15829.7167
5-- K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nfa:NFA_6770(808)13429.1167
0-- K01971  ligD  [tr:Q5Z219_NOCFA] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)15931.4167
7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)16031.2167(12)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_12895(888)15332.0166(57)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_26450(888)15332.0166(57)10-- K01971  ligD  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdx:Psed_3272(661)13531.1166
49-- K01971  ligD DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)15530.3166
7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)15630.8166
7-- K01971  ligD  [tr:B6A397_RHILW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpe:RPE_3724(907)15431.8166(57)4-- K01971  ligD  [tr:Q07K81_RHOP5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> syb:TZ53_20775(831)15628.2166
3-- K01971  ligD  [tr:A0A0C5XXI0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcm:Bcenmc03_6073(927)15529.7165()6-- K01971  ligD  [tr:B1KAE7_BURCC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)15630.8165(15)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...