GFIT result for T01431

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

pbs:Plabr_0882
(147 a.a.)
 
--
 
    [tr:F0SIB6_RUBBR] putative ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ipa:Isop_0204(159)14841.2310
0--     [tr:E8QWB4_ISOPI] hypothetical protein
> ttf:THTE_3213(123)13942.4299
0--    hypothetical protein
> ges:VT84_29070(117)13035.4257
0--     [tr:A0A142XP81_9BACT] hypothetical protein
> saci:Sinac_6085(122)13539.3245
0->     [tr:L0DMY7_SINAD] hypothetical protein
> fmr:Fuma_01668(114)13140.5243(141)0--     [tr:A0A1P8WDE7_9PLAN] hypothetical protein
> pbor:BSF38_00891(129)13337.6243
0->     [tr:A0A1U7CKN6_9BACT] hypothetical protein
> pls:VT03_13660(149)8847.7239(86)0--     [tr:A0A142WXR2_9PLAN] hypothetical protein
> psl:Psta_2104(135)12938.8215
0--     [tr:D2R1Q9_PIRSD] putative ATP-dependent DNA ligase
> blas:BSY18_2878(825)16031.2207
0-- K01971  ligD  [tr:A0A1B3N8M4_9SPHN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphk:SKP52_18625(835)15931.4205
3-- K01971  ligD  [tr:A0A0A7PKR9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12930(197)14632.9202
0--    DNA ligase
> pir:VN12_23005(193)10739.3201
0--     [tr:A0A142Y7C2_9PLAN] hypothetical protein
> nsl:BOX37_03275(755)14529.0200(95)0-- K01971  ligD  [tr:A0A1J0VM97_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_165(187)15631.4197
0-- K01971  ligD  [tr:V6DH24_9DELT] DNA ligase D 3'-phosphoesterase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smaz:LH19_24710(838)15930.8197
0-- K01971  ligD  [tr:A0A0P0E3S7_SPHMC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphq:BWQ93_13790(834)15930.2196
0-- K01971  ligD  [tr:A0A1P8WZE4_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ado:A6F68_01381(838)15329.4195
0-- K01971  ligD  [tr:A0A1B2ACN1_9SPHN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ery:CP97_14928(839)14630.8195(5)0-- K01971  ligD  [tr:A0A160HUG2_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> elq:Ga0102493_111761(830)15629.5194
0-- K01971  ligD  [tr:A0A074MDK5_9SPHN] bifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> span:AWL63_03665(816)15329.4194
0-- K01971  ligD  [tr:A0A1B3Z726_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smag:AN936_21285(838)15930.2193
0-- K01971  ligD  [tr:A0A0N9UH36_SPHMC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amx:AM2010_2477(849)14729.3192
1-- K01971  ligD  [tr:A0A0G3XBK9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> efv:CHH26_13895(840)15531.6192
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cij:WG74_06635(829)15129.1191
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cna:AB433_09865(843)14628.8191
2-- K01971  ligD  [tr:A0A0G3XHX8_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)14729.9190
1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nbr:O3I_003805(771)13331.6189(87)10-- K01971  ligD  [tr:K0EP06_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphp:LH20_17000(837)15828.5189
0-- K01971  ligD  [tr:A0A0M4D143_SPHS1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mek:MSKOL_2512(151)13132.1188
0--     [tr:A0A0E3QDP1_9EURY] ATP-dependent DNA ligase
> mvc:MSVAZ_2500(151)13132.1188
0--     [tr:A0A0E3Q788_9EURY] ATP-dependent DNA ligase
> sphi:TS85_18230(810)15328.8188
3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cman:A9D14_07075(842)15929.6187
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgi:SGRAN_4135(841)15728.7185(81)0-- K01971  ligD  [tr:A0A109YNA4_9SPHN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ster:AOA14_14085(835)15827.8185
0-- K01971  ligD  [tr:A0A142W185_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> barc:AOA65_0304(127)13233.3184
0--     [tr:A0A0N8PWZ1_9ARCH] ATP-dependent DNA ligase
> eli:ELI_04125(839)15230.3184(81)2-- K01971  ligD  [tr:Q2NBM4_ERYLH] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)15432.5184(31)13-- K01971  ligD  [tr:Q98P39_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)15728.7184
1-- K01971  ligD  [tr:Q2G7N8_NOVAD] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nco:AAW31_04750(205)15330.1184
0-- K01971  ligD  [tr:A0A0F7KCD4_9PROT] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsq:Rsph17025_1218(846)14033.6184
5-- K01971  ligD  [tr:A4WRV5_RHOS5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splm:BXU08_12640(819)15329.4184
0-- K01971  ligD  [tr:A0A1S6FL38_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_02590(830)15733.8183(6)0-- K01971  ligD  [tr:A0A0X8IV37_RHIRD] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tye:THEYE_A0546(138)13531.1183
0--     [tr:B5YJH4_THEYD] ligD; DNA ligase D, 3'-phosphoesterase domain
> mbar:MSBR2_2357(151)13132.1182
0--     [tr:A0A0E3R5N8_METBA] ATP-dependent DNA ligase
> same:SAMCFNEI73_Ch3156(254)15232.2182(15)0-- K01971  ligD  [tr:A0A1L3LQQ1_9RHIZ] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssy:SLG_04290(835)14530.3182(80)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nre:BES08_17875(848)14630.8181
0-- K01971  ligD  [tr:A0A1D8A9J8_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pns:A9D12_07005(838)14829.1181
0-- K01971  ligD  [tr:A0A192D4M7_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mema:MMAB1_1769(187)15632.7180
0--     [tr:A0A0X3BLE9_9EURY] lig; DNA ligase (ATP)
> rei:IE4771_PD00652(878)15633.3180
6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)15633.3180
5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)15229.6180(20)7-- K01971  ligD  [tr:C3MIG9_SINFN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mev:Metev_0789(152)13229.5179
0--     [tr:D7E8L8_METEZ] DNA ligase D, 3'-phosphoesterase domain protein
> acp:A2cp1_0935(789)13731.4178(58)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mba:Mbar_A2115(151)13131.3178
1--     [tr:Q46AP6_METBF] conserved hypothetical protein
> mbw:MSBRW_2627(151)13131.3178
1--     [tr:A0A0E3QP27_METBA] ATP-dependent DNA ligase
> min:Minf_2347(133)13631.6178
0--     [tr:B3E0H2_METI4] cdc9; ATP-dependent DNA ligase
> sfh:SFHH103_02797(865)15328.8178(26)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thw:BMG03_06005(802)13732.1178
0-- K01971  ligD  [tr:A0A1S6ID59_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)13731.4177(57)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdt:HYPDE_32328(578)14231.0177
0-- K01971  ligD  [tr:N0B3Q2_9RHIZ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbak:MSBR3_2416(151)13132.1177
0--     [tr:A0A0E3WXG5_METBA] ATP-dependent DNA ligase
> mef:MSWH1_1559(152)13131.3177
0--     [tr:A0A0E3NQF6_9EURY] ATP-dependent DNA ligase
> meq:MSWHS_1751(152)13131.3177
0--     [tr:A0A0E3NKE0_9EURY] ATP-dependent DNA ligase
> mmh:Mmah_0746(152)13234.1177
0--     [tr:D5EAR9_METMS] DNA ligase D, 3'-phosphoesterase domain protein
> nsr:NS506_07750(754)13931.7177(61)0-- K01971  ligD  [tr:A0A0B8N801_9NOCA] DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pye:A6J80_22380(845)15531.6177
0-- K01971  ligD  [tr:A0A1V0GYX4_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)15831.6177
5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvv:BHK69_13460(879)15934.0176
0-- K01971  ligD  [tr:A0A1D7U1T7_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbg:BN140_1383(187)15631.4176
0--     [tr:I7KCW4_METBM] lig5; DNA ligase (ATP)
> mby:MSBRM_2391(151)13131.3176
0--     [tr:A0A0E3QVE8_METBA] ATP-dependent DNA ligase
> pmad:BAY61_01240(190)14531.0176
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splk:AV944_04690(816)15129.1176
0-- K01971  ligD  [tr:A0A1P8PRV3_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)14430.6175
7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> mno:Mnod_7647(544)15130.5175
3-- K01971  ligD  [tr:B8IQT3_METNO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)15932.1175
8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_27290(850)15231.6175(7)0-- K01971  ligD  [tr:A0A1A9GBZ5_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snj:A7E77_04765(834)15127.8175
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcv:Bcav_0653(816)15129.1174(69)9-- K01971  ligD  [tr:C5BY21_BEUC1] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> boa:Bovatus_00603(205)14327.3174
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxy:BXY_06310(205)14327.3174
0--     [tr:D6D754_9BACE] DNA ligase D, 3'-phosphoesterase domain
> eah:FA04_14840(541)15031.3174(14)0-- K01971  ligD  [tr:A0A1S0RDM5_ENSAD] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)15932.1174(6)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)15932.1174
6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhn:AMJ98_PD00262(882)15932.1174
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhx:AMK02_PE00262(882)15932.1174
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)15831.6174
8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)15831.6174(5)6-- K01971  ligD  [tr:C6B636_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsh:Rsph17029_1337(868)15432.5174
6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)15432.5174
8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)15128.5174
4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14700(857)15228.9173(6)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdn:Hden_1070(562)15829.7173(54)0-- K01971  ligD  [tr:D8JV68_HYPDA] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> malg:MALG_00291(814)15130.5173
2-- K01971  ligD  [tr:A0A0H4KR85_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psin:CAK95_22200(899)15230.9173
0-- K01971  ligD  [tr:A0A1W6ZVW3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)16032.5173(18)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)16032.5173(18)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)16032.5173(18)15-- K01971  ligD  [tr:F7XBX2_SINMM] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_24315(891)15833.5172(20)0-- K01971  ligD  [tr:A0A126P1J3_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)15628.2172
1-- K01971  ligD  [tr:A0A0H4PQK2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...