GFIT result for T04140

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

pep:AQ505_12975
(322 a.a.)
 
--
 
K01971  ligD  [tr:A0A0P0NH57_9SPHI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> cpi:Cpin_3242(657)31146.3985(212)3-- K01971  ligD  [tr:C7PQT6_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)31740.4839(84)5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)32139.6837(613)4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)31541.0803()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)30442.4800(546)0-- K01971  ligD  [tr:A0A172TV90_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)31141.5800(533)0-- K01971  ligD  [tr:A0A0U5JG24_9BACT] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salt:AO058_01020(819)31537.1781(573)0-- K01971  ligD  [tr:A0A1L6QZ30_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)32539.4780()0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)32540.3778(210)6-- K01971  ligD  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)31940.4778(59)6-- K01971  ligD  [tr:C6B636_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)31940.4776(243)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)31540.3771(220)7-- K01971  ligD  [tr:B6A397_RHILW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)32735.5768(567)1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)31939.2767(215)3-- K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)31839.6764(414)3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)31436.0763(554)0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)32942.6762(272)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)32537.2760(480)1-- K01971  ligD  [tr:F0SBI2_PSESL] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_28305(880)31441.1759(154)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_22120(898)32438.6758(8)0-- K01971  ligD  [tr:A0A142X1L6_9PLAN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)32039.1758(194)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)31037.4756()0-- K01971  ligD  [tr:A0A1L3J570_9FLAO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)32239.8756(173)7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)31939.8756(229)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ops:A8A54_22075(882)31939.5755(479)0-- K01971  ligD  [tr:A0A1A9FVN3_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_09810(315)30640.2754(6)6--    DNA ligase
> bju:BJ6T_19970(315)30640.2754(6)8--     [tr:G7D608_BRAJP] hypothetical protein
> bid:Bind_0382(644)31538.4750(503)2-- K01971  ligD  [tr:B2IE11_BEII9] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)31938.9749(55)6-- K01971  ligD  [tr:Q7D410_AGRFC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)33836.4748(545)28-- K01971  ligD  [tr:F0Q2F4_ACIAP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_04490(883)32539.4747(41)0-- K01971  ligD  [tr:A0A109VSJ1_RHIRD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)33736.8745(540)85-- K01971  ligD  [tr:A1TQ54_ACIAC] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_08150(315)30639.2744(55)0<-     [tr:A0A109QA74_9BRAD] DNA ligase
> nwi:Nwi_0353(913)31838.7744()3-- K01971  ligD  [tr:Q3SVS1_NITWN] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)33036.7743(493)0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpd:VAPA_1c17500(851)32338.4740(539)4-- K01971  ligD  [tr:T1X8H8_VARPD] putative DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)32635.6739(530)2-- K01971  ligD  [tr:C6VYF5_DYAFD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_2087(804)31135.7738(488)0-- K01971  ligD  [tr:A0A1L7I5D3_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)31440.1737()1-- K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)32338.1737(540)9-- K01971  ligD  [tr:C5CTW0_VARPS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)30437.2736(507)0-- K01971  ligD  [tr:A0A1A9I261_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)31939.5736(483)4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c16580(850)31638.3735(108)8-- K01971  ligD  [tr:I3X2Z1_RHIFR] ykoU2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> trs:Terro_2462(949)31339.6735(419)7-- K01971  ligD  [tr:I3ZHJ5_TERRK] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gur:Gura_3452(534)31038.4734()0-- K01971  ligD  [tr:A5G740_GEOUR] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psty:BFS30_24365(919)32336.2733(32)0-- K01971  ligD  [tr:A0A1D7QMY0_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sino:SS05631_b61200(850)31737.2733(10)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_24315(891)31638.0732(71)0-- K01971  ligD  [tr:A0A126P1J3_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_09765(682)33237.0732(49)0-- K01971  ligD  [tr:A0A0S3FXY0_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)30837.0732()0-- K01971  ligD  [tr:W0EYS4_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_31130(878)31739.4732(23)0-- K01971  ligD  [tr:A0A1A9GDH8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)32938.0731(368)4-- K01971  ligD  [tr:Q1ITL6_KORVE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)31737.9731(481)2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)31439.2731(46)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> byi:BYI23_A015080(904)32137.7730(98)2-- K01971  ligD  [tr:G8M3M4_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mln:A9174_03965(829)31940.1730(203)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)31439.2730(48)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhn:AMJ98_PD00262(882)31439.2730(47)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhx:AMK02_PE00262(882)31439.2730(50)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)31940.1729(50)11-- K01971  ligD  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bac:BamMC406_6340(949)33438.6728()6-- K01971  ligD  [tr:B1Z4V9_BURA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)32937.1728(448)0-- K01971  ligD  [tr:A0A1W1I2Z9_9BACT] ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snj:A7E77_04765(834)32337.8728(485)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)31836.8727()1-- K01971  ligD  [tr:A9HXI5_BORPD] unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bstg:WT74_19350(962)32637.4726()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buo:BRPE64_ACDS15530(909)32137.1726()2-- K01971  ligD  [tr:R4WYK7_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhy:RD110_14845(830)31940.4726(531)0-- K01971  ligD  [tr:A0A1P8JX24_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bue:BRPE67_ACDS15580(907)32137.4725(62)3-- K01971  ligD  [tr:A0A060P483_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splk:AV944_04690(816)31039.7725(501)0-- K01971  ligD  [tr:A0A1P8PRV3_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> same:SAMCFNEI73_pB0496(946)31339.0724(4)0-- K01971  ligD  [tr:A0A1L3LUE4_9RHIZ] ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpha:AMC79_PB00200(881)31239.7723(40)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)30338.3722(410)105-- K01971  ligD  [tr:Q2IP30_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nlc:EBAPG3_007500(847)32438.0722()0-- K01971  ligD  [tr:A0A1W6STE2_9PROT] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssy:SLG_04290(835)32339.0722(370)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)32139.3722(511)5-- K01971  ligD  [tr:A7INJ2_XANP2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)31438.5721()2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bdf:WI26_27455(921)33438.3720()0-- K01971  ligD  [tr:A0A1B4C3F0_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eyy:EGYY_19050(833)31437.3720()0-- K01971  ligD  [tr:F7UV10_EEGSY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)31438.9720(31)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)31338.7720(68)15-- K01971  ligD  [tr:F7XBX2_SINMM] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_01460(663)30937.5719(192)0-- K01971  ligD  [tr:A0A143PIN6_9BACT] ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)32038.8719(483)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pst:PSPTO_3464(851)31836.8719()3-- K01971  ligD  [tr:Q87ZG5_PSESM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_b04710(850)31936.4719(111)7-- K01971  ligD  [tr:Q6W1H3_SINFN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> six:BSY16_4675(879)31339.3719(104)0-- K01971  ligD  [tr:A0A1B3MJD8_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcai:K788_0007984(961)32037.2718(234)0-- K01971  ligD  [tr:A0A0P0R9T9_9BURK] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_3871(315)30937.9718(9)0--     [tr:A0A160UEZ6_BRASZ] ATPdependent DNA ligase EC 6511
> gbm:Gbem_0128(871)31240.7718()2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)31439.5718(214)3-- K01971  ligD  [tr:A0A068STE9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)31838.7718()0-- K01971  ligD  [tr:Q2Y9U1_NITMU] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)31338.0718(66)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsa:AciPR4_1657(957)31238.5716()12-- K01971  ligD  [tr:E8V3A7_TERSS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)32436.4716(504)0-- K01971  ligD  [tr:A0A126ZG35_9BURK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)31837.4715(9)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)32138.3715(515)10-- K01971  ligD  [tr:A1W8V8_ACISJ] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buk:MYA_5305(997)33838.2715()25-- K01971  ligD  [tr:I2DYC4_9BURK] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dts:BI380_07525(892)32636.5715(149)0-- K01971  ligD  [tr:A0A1D8IXR7_9BURK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)30838.6715(613)1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lha:LHA_0995(831)31038.4715(500)1-- K01971  ligD  [tr:A0A0A8URC6_LEGHA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> masw:AM586_12130(890)32838.1715(516)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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