GFIT result for T03813

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

pft:JBW_01943
(333 a.a.)
 
--
 
K01971  ligD  [tr:I9NUX3_9FIRM] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> puf:UFO1_2618(326)32665.31415
0<> K01971  ligD  [tr:A0A075KDC1_9FIRM] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dti:Desti_0132(536)32249.7965
0--     [tr:I4BZY8_DESTA] DNA ligase D/DNA polymerase LigD
> cfi:Celf_0800(491)32843.6893(566)13-- K01971  ligD  [tr:F4H018_CELFA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)32444.1864(551)3-- K01971  ligD  [tr:D6Y3U5_THEBD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmar:MODMU_2075(489)32642.9862(505)14<- K01971  ligD  [tr:I4EVU7_9ACTN] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cwo:Cwoe_4716(815)32744.0857(523)14-- K01971  ligD  [tr:D3FA34_CONWI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gob:Gobs_2120(436)32543.4835(518)25<- K01971  ligD  [tr:D2SFQ0_GEOOG] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nsr:NS506_05464(316)31745.1829(334)0-- K01971  ligD  [tr:A0A1I9ZC47_9NOCA] DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strc:AA958_07435(334)33042.7822(479)9-- K01971  ligD  [tr:A0A0F7N3Y2_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsd:BLASA_3098(323)32444.1818(510)10-- K01971  ligD  [tr:H6RPA9_BLASD] LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)32442.3807(438)0-- K01971  ligD  [tr:A0A1B2HSK8_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> all:CRK60828(484)32341.8804(232)0-- K01971  ligD  [tr:A0A0H5CSB1_9PSEU] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fal:FRAAL4382(581)32338.7803(458)122-- K01971  ligD  [tr:Q0RHK2_FRAAA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> noa:BKM31_27980(334)31642.4799(1)0-- K01971  ligD  [tr:A0A1V0A3I7_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cum:NI26_01570(842)32640.8791(482)0-- K01971  ligD  [tr:A0A0N6ZYP5_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cub:BJK06_06465(840)31341.5784(502)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kphy:AOZ06_15230(477)32541.5775(412)0-- K01971  ligD  [tr:A0A0N9I0U0_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_34920(477)32940.7770(103)2-- K01971  ligD  [tr:C7MQ31_SACVD] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cart:PA27867_1555(879)32941.0768(432)0<- K01971  ligD  [tr:A0A1B1BIU3_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sesp:BN6_42910(492)32441.0765(227)23<- K01971  ligD  [tr:K0K408_SACES] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_20405(333)33242.2762(459)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cai:Caci_5248(495)33542.1759(406)9<- K01971  ligD  [tr:C7Q6S2_CATAD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_2002(316)32040.9755
0<- K10747  LIG1  [tr:A4J617_DESRM] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> fri:FraEuI1c_4744(558)32639.6752(432)64-- K01971  ligD  [tr:E3IZG5_FRAIE] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nsl:BOX37_27860(319)31742.0751(199)0-- K01971  ligD  [tr:A0A1J0VYM6_9NOCA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cphy:B5808_14620(902)32640.5750(392)0<- K01971  ligD  [tr:A0A1X9LPS4_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rey:O5Y_21290(760)32939.5745(443)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhw:BFN03_13610(767)32440.7741(429)0-- K01971  ligD  [tr:A0A1D8T6P7_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1852(316)32040.9740
1<-     [tr:F6DU38_DESRL] DNA polymerase LigD, ligase domain protein
> mdx:BTO20_29155(752)33041.2739(410)0-- K01971  ligD  [tr:A0A1Y0CAT0_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_22360(384)32939.8737(419)0-- K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_22835(384)32939.8737(419)0-- K01971  ligD  [tr:A0A1L7FCL6_9PSEU] DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mli:MULP_04790(838)32740.1736(413)6-- K01971  ligD  [tr:L7VCM2_MYCL1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD01566(759)33140.2736(68)12-- K01971  ligD  [tr:W8GXY1_RHOOP] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rop:ROP_51120(758)32940.7735(210)9-- K01971  ligD  [tr:C1ATU5_RHOOB] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmae:MMARE11_43850(770)32740.1731(370)0-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmi:MMAR_4573(770)32740.1731(370)7-- K01971  ligD  [tr:B2HEF3_MYCMM] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mab:MAB_1033(750)32640.2730(418)6<- K01971  ligD Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mabo:NF82_05205(783)32640.2730(402)6<- K01971  ligD  [tr:A0A1N5TBA6_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> may:LA62_05210(783)32640.2730(402)6<- K01971  ligD  [tr:A0A1N5TBA6_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> maz:LA61_05120(783)32640.2730(402)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mul:MUL_4434(770)32740.1729(387)6-- K01971  ligD  [tr:A0PVP8_MYCUA] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rha:RHA1_ro05048(766)32540.6729(95)12-- K01971  ligD  [tr:Q0S6K7_RHOJR] DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_24545(323)32039.4729(431)0-- K01971  ligD  [tr:A0A1D7VQE6_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mav:MAV_1056(766)32741.0728(127)6-- K01971  ligD  [tr:A0A0H3A334_MYCA1] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_28605(484)32040.0726(168)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mabl:MMASJCM_1059(783)32439.8725(411)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mao:MAP4_2980(764)32741.0725(126)6-- K01971  ligD ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavi:RC58_14795(764)32741.0725(126)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavu:RE97_14820(764)32741.0725(126)6-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpa:MAP_0880(764)32741.0725(126)0-- K01971  ligD  [tr:Q742F5_MYCPA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reb:XU06_21400(758)32439.2725(98)3-- K01971  ligD  [tr:A0A0E4AAH1_RHOER] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_1851(340)32038.8723(375)17-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_2086(340)32038.8723(375)17-- K01971  ligD  [tr:H2JSJ6_STRHJ] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mki:LH54_09045(783)32739.1722(372)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mkn:MKAN_09095(783)32739.1722(372)8-- K01971  ligD  [tr:U5WMM9_MYCKA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mks:LG40_08950(783)32739.1722(419)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rer:RER_45220(758)32439.2721(167)4-- K01971  ligD  [tr:C0ZMH2_RHOE4] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmv:MYCMA_0544(750)32639.6720(390)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myc:NF90_18290(783)32639.6720(390)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mys:NF92_18285(783)32639.6720(390)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> actn:L083_1682(393)32041.3719(106)18-- K01971  ligD  [tr:R4L6P9_9ACTN] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mabb:MASS_1028(783)32639.6719(389)6<- K01971  ligD  [tr:R4UNI2_9MYCO] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mava:LA64_04705(766)32740.7719(118)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavd:NF84_04590(766)32740.7719(118)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mavr:LA63_04695(766)32740.7719(118)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_00866(329)32538.5719(352)0-- K01971  ligD  [tr:A0A0U5GY57_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mak:LH56_17820(783)32639.6718(387)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_04600(758)32740.1718(151)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> req:REQ_10780(746)32339.3718(38)4-- K01971  ligD  [tr:E4WE24_RHOE1] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_0407(326)32539.1718(359)0-- K01971  ligD  [tr:A0A1B1M1U6_STRLN] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stre:GZL_02561(310)31938.6718(413)11-- K01971  ligD  [tr:A0A0A8EI44_9ACTN] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cry:B7495_07570(833)32438.3717(379)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> miz:BAB75_05505(779)32240.4717(390)0<- K01971  ligD  [tr:A0A0N0KNJ7_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mph:MLP_04810(812)33838.2717(353)6-- K01971  ligD  [tr:F5XJZ9_MICPN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mts:MTES_3162(825)33139.3717(367)13-- K01971  ligD  [tr:E8NC83_MICTS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afs:AFR_28570(389)33639.3716(116)12-- K01971  ligD  [tr:U5W7K1_9ACTN] DNA polymerase LigD ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mrh:MycrhN_3288(773)32740.1716(383)12-- K01971  ligD  [tr:G8RNW2_MYCRN] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strt:A8713_02310(327)32938.3716(387)0-- K01971  ligD  [tr:A0A1A9J658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmh:VO01_09615(836)32839.9714
13<- K01971  ligD  [tr:A0A0D5CI80_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agy:ATC03_01400(835)32741.0712(354)0<- K01971  ligD  [tr:A0A191WBP4_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snr:SNOUR_10910(326)31938.6712(406)0-- K01971  ligD  [tr:A0A1B2GNI5_STRNR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kfl:Kfla_4705(318)32237.9711(370)4-- K01971  ligD  [tr:D2PZB3_KRIFD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mll:B1R94_23495(759)33039.1711(399)0-- K01971  ligD  [tr:A0A1U9PKJ1_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mche:BB28_05145(783)32638.7710(407)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> art:Arth_0294(845)32839.6709(356)5<- K01971  ligD  [tr:A0JRM5_ARTS2] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD ligase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sci:B446_04080(327)31938.6709(365)19-- K01971  ligD  [tr:S5UX75_STRC3] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_05316(761)32740.7707(159)9-- K01971  ligD  [tr:L0J2H8_9MYCO] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_65450(326)32538.8707(372)0-- K01971  ligD  [tr:A0A0F7VZM1_9ACTN] sle_65450; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmi:CMM_2074(832)32839.9706()10<- K01971  ligD  [tr:A5CSR6_CLAM3] conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mft:XA26_13320(758)32539.7706(352)0-- K01971  ligD  [tr:A0A0N9XNX0_MYCFO] ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mva:Mvan_4915(763)32739.4706(382)7-- K01971  ligD  [tr:A1TET8_MYCVP] ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myv:G155_06665(758)32539.7706(358)7-- K01971  ligD  [tr:A0A0A1FKS4_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tcu:Tcur_1208(316)32938.0705
2<- K01971  ligD  [tr:D1A995_THECD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_19410(347)33140.5703(384)0-- K01971  ligD  [tr:A0A1D8C0U6_9PSEU] DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_05800(755)32739.8703(137)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_09290(759)32739.8703(139)7-- K01971  ligD  [tr:H8ISV2_MYCIA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mid:MIP_01544(755)32739.8703(366)6-- K01971  ligD  [tr:J9W7H7_MYCIP] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_04565(759)32739.8703(142)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_09380(755)32739.8703(142)7-- K01971  ligD  [tr:A0A1X2L2H3_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...