GFIT result for T04401

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

plh:VT85_02045
(484 a.a.)
 
--
 
K01971  ligD  [tr:A0A142YAI4_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> amd:AMED_4189(525)51938.71162(466)10-- K01971  ligD  [tr:A0A0H3D8U5_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_4139(525)51938.71162(466)10-- K01971  ligD  [tr:G0FQB4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_21335(525)51938.71162(466)10-- K01971  ligD  [tr:G0FQB4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_4139(525)51938.71162(466)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ace:Acel_1670(527)51938.01149(532)2-- K01971  ligD  [tr:A0LVI2_ACIC1] DNA primase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_14840(541)51938.51134(560)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pvr:PverR02_14135(501)48838.91101
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mno:Mnod_7647(544)52338.61062(948)3-- K01971  ligD  [tr:B8IQT3_METNO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfl:Cfla_0817(522)51837.31050(532)6-- K01971  ligD  [tr:D5UJY5_CELFN] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hmc:HYPMC_2433(559)55136.11036(934)1-- K01971  ligD  [tr:F8JHK0_HYPSM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hni:W911_06870(540)51036.91028
1-- K01971  ligD  [tr:V5SB92_9RHIZ] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_008840(566)55036.41027(909)12-- K01971  ligD  [tr:A0A0K1E862_CHOCO] ligC; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samy:DB32_005756(574)57336.61022(474)15-- K01971  ligD  [tr:A0A0F6YKP4_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdt:HYPDE_32328(578)55437.01005
0-- K01971  ligD  [tr:N0B3Q2_9RHIZ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdn:Hden_1070(562)53836.6982(880)0-- K01971  ligD  [tr:D8JV68_HYPDA] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pzu:PHZ_p0051(536)52635.4905(337)6-- K01971  ligD  [tr:B4RI19_PHEZH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_4181(647)63430.6874(207)26-- K01971  ligD  [tr:A4FHC5_SACEN] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)71330.4835(197)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0935(789)71330.2818(176)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)33639.9804(147)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_3587(395)38935.5785(217)7-- K01971  ligD  [tr:A0A076MSS0_AMYME] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)30744.0785(685)7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> ade:Adeh_0884(726)70229.9781(133)346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)33537.3779(165)15-- K01971  ligD  [tr:W0RSS2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msd:MYSTI_01057(341)32740.1776(662)36-- K01971  ligD  [tr:L7U0S6_MYXSD] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbar:AWN76_001560(303)27742.2762(185)0-- K01971  ligD  [tr:A0A1V0DAF0_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sur:STAUR_6997(836)37237.4762(652)8-- K01971  ligD  [tr:Q09E36_STIAD] ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eba:ebA6655(742)69529.4757
2-- K01971  ligD  [tr:Q5NYD8_AROAE] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)28938.8754(166)0-- K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mbd:MEBOL_004870(838)36039.2752(638)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoh:Hoch_3330(896)31139.5751(233)65-- K01971  ligD  [tr:D0LUZ1_HALO1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_1807(302)27540.4746(138)0-- K01971  ligD  [tr:A0A1L7I4L1_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)43132.7739(122)3-- K01971  ligD  [tr:C7PLF2_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)30439.1734
0-- K01971  ligD  [tr:A0A1A9I261_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)27442.7733(203)5-- K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> age:AA314_02665(854)36239.2731(207)5-- K01971  ligD  [tr:A0A0G2ZQM1_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)27442.7730(200)3-- K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15580(296)27442.7729(197)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)27942.7729(181)0-- K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)27442.3726(196)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)27442.3726(196)4-- K01971  ligD  [tr:A0A1X2L0S2_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)27442.3726(197)3-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_13685(296)27441.6726(183)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)27442.3726(196)3-- K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_13250(317)26743.8722(112)0-- K01971  ligD  [tr:A0A1D7VK40_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vin:AKJ08_0648(618)42634.7720
2-- K01971  ligD  [tr:A0A0K1PA21_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)27743.0718(124)0-- K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)26145.2716(121)0-- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_0339(312)26542.6716(152)9-- K01971  ligD  [tr:G2PB75_STRVO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)27239.3715(130)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)34237.1714
0-- K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)27440.1714(207)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)29639.9714(154)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)27541.5713(50)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)27839.9711(610)0-- K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)32236.3708
0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_24695(312)27442.0708(125)7-- K01971  ligD  [tr:A0A0A0NK22_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)29239.7707(127)0-- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)28841.7707(120)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stsi:A4E84_33405(319)29040.7706(145)0-- K01971  ligD  [tr:A0A143CAJ2_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)25845.0705(131)24-- K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7216(311)28142.0705(101)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_7456(311)28142.0705(101)12-- K01971  ligD  [tr:H2JMG2_STRHJ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_6916(312)27841.0705(102)0-- K01971  ligD  [tr:A0A1B1MKK3_STRLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_01230(291)27140.6704(94)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)30437.2704
0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)28340.6703(102)10-- K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sauo:BV401_23550(314)27740.4701(128)0-- K01971  ligD  [tr:A0A1P8XXT5_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)28140.9701
0-- K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)26937.9700(59)0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_CH00617(659)39833.9700(117)4-- K01971  ligD  [tr:Q2KCK3_RHIEC] putative DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12940(303)27841.7699(17)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)29136.4699(14)0-- K01971  ligD  [tr:A0A0P0U5U7_FLAPS] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_CH00627(659)39833.9698(120)5-- K01971  ligD  [tr:S5RZC5_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)26741.2696
0-- K01971  ligD  [tr:F6DU47_DESRL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)29938.5696(54)3-- K01971  ligD  [tr:Q11J79_CHESB] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_27050(309)25743.6696(94)0-- K01971  ligD  [tr:A0A191V5X6_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)33036.4695
10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)27741.2693(50)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)27638.0692(137)0-- K01971  ligD  [tr:A0A143PN04_9BACT] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)34236.0692(589)0-- K01971  ligD  [tr:C8WIH5_EGGLE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)37332.2691(584)4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smt:Smal_0026(825)32638.7690
5-- K01971  ligD  [tr:B4SR30_STRM5] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfus:CYFUS_001959(865)42234.6689(587)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)44031.8689(589)2-- K01971  ligD  [tr:A0A0K2BE58_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_00960(763)31536.8689(106)8-- K01971  ligD  [tr:A0A0K1PLM9_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)31736.6689
0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)27939.8688(135)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_09695(786)34435.5688(33)28-- K01971  ligD  [tr:S4XS85_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xcp:XCR_0122(950)31836.5688(90)39-- K01971  ligD  [tr:G0CHN8_XANCA] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)26535.1687(77)0-- K01971  ligD  [tr:D1Z0H5_METPS] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)28140.2687(86)6-- K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sml:Smlt0053(828)32638.3687(42)6-- K01971  ligD  [tr:B2FU16_STRMK] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)46033.7686
1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)46033.7686
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpha:AMC79_CH00655(836)39532.7686(21)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salt:AO058_01020(819)34033.8686
0-- K01971  ligD  [tr:A0A1L6QZ30_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)31037.1685
3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)32936.2684(23)6-- K01971  ligD  [tr:B3PPH4_RHIE6] probable ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)33733.5684
1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...