GFIT result for
psd
|
GFIT result for
psd
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| psd:DSC_06605 (171 a.a.) |
-- |
K02860 | rimM | rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pwi:MWN52_07490(?) | 171 | 86.5 | 1036 | 0 | -- | - | |||
| > pmex:H4W19_07420(175) | 165 | 79.4 | 924 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lsx:H8B22_12605(172) | 172 | 73.8 | 892 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lug:FPZ22_02820(170) | 165 | 73.3 | 854 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > pjp:LAG73_04490(175) | 165 | 70.3 | 847 | 1 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > slm:BIZ42_14950(170) | 168 | 69.0 | 841 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > laux:LA521A_12540(179) | 171 | 69.0 | 840 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lcic:INQ41_04565(171) | 170 | 70.6 | 833 | 1 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > psuw:WQ53_13165(176) | 163 | 69.9 | 831 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > spaq:STNY_R12720(170) | 165 | 70.9 | 828 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lavi:INQ42_04370(171) | 170 | 70.0 | 827 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > sml:Smlt1375(170) | 165 | 70.3 | 824 | 0 | <> | K02860 | rimM | rimM; putative 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > buj:BurJV3_1140(170) | 165 | 70.3 | 823 | 0 | <> | K02860 | rimM | Ribosome maturation factor rimM; K02860 16S rRNA processing protein RimM | |
| > sgen:RKE57_05750(?) | 165 | 70.3 | 823 | 0 | -- | - | |||
| > smz:SMD_1227(170) | 165 | 70.3 | 823 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > sten:CCR98_06125(170) | 165 | 70.3 | 823 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > stes:MG068_05750(170) | 165 | 70.3 | 823 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lyj:FKV23_11150(171) | 166 | 69.3 | 820 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lsol:GOY17_06550(179) | 171 | 67.3 | 817 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lab:LA76x_2015(171) | 169 | 68.0 | 814 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > laq:GLA29479_1487(171) | 169 | 68.0 | 814 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > smt:Smal_1154(170) | 168 | 68.5 | 814 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xsa:SB85_06675(170) | 168 | 68.5 | 813 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lum:CNR27_07435(175) | 165 | 70.9 | 812 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > srh:BAY15_1297(170) | 168 | 67.3 | 812 | 0 | <> | K02860 | rimM | 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > lmb:C9I47_2062(171) | 166 | 69.9 | 809 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > stem:CLM74_06265(170) | 168 | 67.9 | 809 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lez:GLE_3254(171) | 168 | 68.5 | 805 | 1 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > lya:RDV84_16360(?) | 168 | 68.5 | 805 | 0 | -- | - | |||
| > sinc:DAIF1_12280(170) | 168 | 67.3 | 805 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lare:HIV01_006950(176) | 176 | 65.3 | 801 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xhy:FZ025_16225(170) | 168 | 67.9 | 801 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lem:LEN_1831(171) | 168 | 67.9 | 800 | 0 | <> | K02860 | rimM | rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > psu:Psesu_0998(190) | 165 | 66.7 | 798 | 3 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > lcp:LC55x_1973(171) | 169 | 65.7 | 797 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xga:BI317_07540(170) | 167 | 66.5 | 796 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xhr:XJ27_08665(170) | 167 | 66.5 | 796 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xcz:EBN15_05300(170) | 167 | 64.7 | 795 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xth:G4Q83_09910(170) | 165 | 68.5 | 793 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xag:HEP73_03015(170) | 168 | 66.7 | 792 | 1 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xas:HEP74_02840(?) | 168 | 66.7 | 792 | 0 | -- | - | |||
| > xhd:LMG31886_30350(170) | 167 | 65.9 | 792 | 0 | <> | K02860 | rimM | rimM; Ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > tbv:H9L17_14130(178) | 165 | 69.1 | 790 | 1 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xfa:XF_0108(170) | 168 | 65.5 | 789 | 0 | <> | K02860 | rimM | 16S rRNA processing protein; K02860 16S rRNA processing protein RimM | |
| > xfh:XFHB_00430(170) | 168 | 65.5 | 789 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xfs:D934_01365(170) | 168 | 65.5 | 789 | 0 | <> | K02860 | rimM | 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xal:XALC_0953(170) | 168 | 66.1 | 788 | 0 | <> | K02860 | rimM | rimM; probable 16s rrna-processing protein; K02860 16S rRNA processing protein RimM | |
| > xfr:BER92_05930(170) | 167 | 65.9 | 788 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xfm:Xfasm12_0088(170) | 168 | 64.9 | 787 | 0 | <> | K02860 | rimM | 16S rRNA processing protein; K02860 16S rRNA processing protein RimM | |
| > xtn:FD63_05730(170) | 168 | 66.7 | 786 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > pdd:MNQ95_11680(177) | 163 | 64.4 | 785 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lgu:LG3211_3229(171) | 172 | 65.1 | 784 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xff:XFLM_05670(170) | 168 | 64.9 | 784 | 0 | <> | K02860 | rimM | rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xfl:P303_11525(170) | 168 | 64.9 | 784 | 0 | <> | K02860 | rimM | 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xfn:XfasM23_0074(170) | 168 | 64.9 | 784 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xft:PD_0082(170) | 168 | 64.9 | 784 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein; K02860 16S rRNA processing protein RimM | |
| > sacz:AOT14_12470(171) | 171 | 63.2 | 783 | 0 | <> | K02860 | rimM | rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > stek:AXG53_11735(171) | 171 | 64.3 | 783 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > llz:LYB30171_01675(171) | 166 | 66.3 | 782 | 1 | <> | K02860 | rimM | rimM; Ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lue:DCD74_02060(174) | 166 | 68.1 | 782 | 1 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xcb:XC_3042(170) | 167 | 64.1 | 781 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcc:XCC1200(170) | 167 | 64.1 | 781 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > lyt:DWG18_06590(183) | 171 | 65.5 | 780 | 1 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xca:xcc-b100_3139(170) | 167 | 64.1 | 780 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcp:XCR_1436(170) | 167 | 64.1 | 780 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > lcas:LYSCAS_23620(174) | 165 | 66.7 | 779 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > lhx:LYSHEL_23620(174) | 165 | 66.7 | 779 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > steq:ICJ04_05580(170) | 165 | 65.5 | 779 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > tcn:H9L16_15560(173) | 165 | 67.3 | 773 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xan:AC801_06560(170) | 167 | 64.1 | 773 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xph:XppCFBP6546_05020(170) | 167 | 64.1 | 773 | 0 | <> | K02860 | rimM | rimM, XppCFBP6546P_05020; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > thes:FHQ07_13560(173) | 165 | 66.1 | 772 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xac:XAC1293(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xao:XAC29_06505(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xax:XACM_1270(170) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcf:J172_01426(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xci:XCAW_03058(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | rimM; RimM protein, required for 16S rRNA processing; K02860 16S rRNA processing protein RimM | |
| > xcj:J158_01431(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcm:J164_01431(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcn:J169_01431(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcr:J163_01431(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xct:J151_01435(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcu:J159_01431(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcv:XCV1343(180) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xcw:J162_01431(170) | 165 | 64.2 | 771 | 0 | <> | K02860 | rimM | 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xom:XOO1220(170) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | XOO1220; Probable 16S rRNA processing protein rimM; K02860 16S rRNA processing protein RimM | |
| > xoo:XOO1326(180) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xop:PXO_02148(180) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xoy:AZ54_17850(170) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xpe:BJD13_10170(170) | 167 | 64.1 | 771 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xdy:NYR95_07200(?) | 167 | 64.7 | 770 | 0 | -- | - | |||
| > xor:XOC_3417(180) | 167 | 64.1 | 770 | 0 | <> | K02860 | rimM | rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM | |
| > xoz:BE73_05540(170) | 167 | 64.1 | 770 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > theh:G7079_06220(173) | 165 | 64.2 | 769 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xar:XB05_01260(170) | 167 | 63.5 | 769 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xva:C7V42_06995(170) | 167 | 64.1 | 767 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xpr:MUG10_03305(170) | 167 | 64.1 | 766 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xve:BJD12_19790(170) | 167 | 64.1 | 766 | 0 | <> | K02860 | rimM | ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xeu:XSP_001318(170) | 167 | 62.9 | 763 | 0 | <> | K02860 | rimM | rimM; ribosome maturation factor RimM; K02860 16S rRNA processing protein RimM | |
| > xfu:XFF4834R_chr32420(170) | 167 | 63.5 | 762 | 0 | <> | K02860 | rimM | rimM; probable ribosome maturation factor rimM; K02860 16S rRNA processing protein RimM | |