GFIT result for T04884

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

pswu:SY83_19110
(301 a.a.)
 
--
 
K01971  ligD  [tr:A0A172TM40_9BACL] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pmw:B2K_27655(303)29843.0787(413)4-- K01971  ligD  [tr:I0BPX8_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmq:PM3016_5352(303)29843.0784(410)4-- K01971  ligD  [tr:H6NB87_9BACL] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pms:KNP414_03977(303)29842.6778(402)3-- K01971  ligD  [tr:F8FBE7_PAEMK] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tum:CBW65_10305(351)30039.7737(433)0-- K01971  ligD  [tr:A0A1Y0IVA2_9BACL] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_0182(300)29435.0618(316)1-- K01971  ligD  [tr:E6TTD1_BACCJ] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsp:Bsph_p130(282)27034.4556(291)2-- K01971  ligD  [tr:B1I0K1_LYSSC] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1243(324)31133.4506(398)1-- K01971  ligD  [tr:A5D2W1_PELTS] CDC9; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)29331.4461(146)0-- K01971  ligD  [tr:A0A1B2HSK8_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1165(316)30929.8450
0--     [tr:F6B3K0_DESCC] DNA polymerase LigD, ligase domain protein
> dku:Desku_0983(318)31629.1447
0--     [tr:F6CIP6_DESK7] DNA polymerase LigD, ligase domain protein
> drm:Dred_2002(316)30629.1447
0-- K10747  LIG1  [tr:A4J617_DESRM] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> dru:Desru_1852(316)30727.7447()1--     [tr:F6DU38_DESRL] DNA polymerase LigD, ligase domain protein
> gym:GYMC10_0669(288)29026.6435(204)1-- K10747  LIG1  [tr:D3ECS8_GEOS4] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> psab:PSAB_20545(289)28928.4427(190)2-- K10747  LIG1  [tr:X4ZRA5_9BACL] ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pmad:BAY61_28605(484)31531.7425(169)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ttm:Tthe_0704(307)30428.6424
0-- K01971  ligD  [tr:D9TTK2_THETC] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> req:REQ_26630(323)26832.1420(80)5-- K01971  ligD  [tr:E4WID1_RHOE1] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_1488(320)31030.0413
1-- K10747  LIG1  [tr:Q2RIE2_MOOTA] ATP dependent DNA ligase, central; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> cfi:Celf_0800(491)25630.9408(156)13-- K01971  ligD  [tr:F4H018_CELFA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puf:UFO1_2618(326)26932.3407
0-- K01971  ligD  [tr:A0A075KDC1_9FIRM] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_34920(477)31230.1407(93)2-- K01971  ligD  [tr:C7MQ31_SACVD] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)30830.5407(180)3-- K01971  ligD  [tr:D6Y3U5_THEBD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsh:Tsac_1306(307)30426.0406
0-- K01971  ligD  [tr:I3VUX2_THESW] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tto:Thethe_00683(307)30326.7404
0-- K01971  ligD  [tr:L0IHR9_THETR] ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1818(322)30927.2403
1-- K01971  ligD  [tr:R4KNQ9_9FIRM] DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppac:PAP_00300(559)29532.9401
0-- K10747  LIG1  [tr:A0A075LRA3_9EURY] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pho:PH1622(559)29431.6400
0-- K10747  LIG1  [sp:DNLI_PYRHO] PH1622; 559aa long hypothetical DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tex:Teth514_0952(307)30127.9400
0-- K01971  ligD  [tr:B0K5X7_THEPX] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thx:Thet_1965(307)30127.9400
0-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strc:AA958_07435(334)32130.2399(146)9-- K01971  ligD  [tr:A0A0F7N3Y2_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbo:Thebr_0487(307)30127.9399
0-- K01971  ligD  [tr:E8UVF1_THEBF] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tki:TKV_c19040(307)30127.2399
0-- K01971  ligD  [tr:A0A097ATC0_THEKI] ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpd:Teth39_0475(307)30127.9399
0-- K01971  ligD  [tr:B0KD43_THEP3] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> txy:Thexy_0579(307)30426.0399
0-- K01971  ligD  [tr:F6BHW1_THEXL] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mrh:MycrhN_3288(773)31829.6398(134)12-- K01971  ligD  [tr:G8RNW2_MYCRN] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pyn:PNA2_0205(559)29332.1398
0-- K10747  LIG1  [tr:F4HIS4_PYRSN] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tch:CHITON_1858(559)29331.4398
0-- K10747  LIG1  [tr:A0A160VTY7_9EURY] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tit:Thit_1868(307)30127.9397
0-- K01971  ligD  [tr:D3T4F8_THEIA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmt:Tmath_1843(307)30127.9397
0-- K01971  ligD  [tr:D7ARJ9_THEM3] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtn:A6122_2623(831)29730.3395(121)0-- K01971  ligD  [tr:A0A160KVI6_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdh:B9T62_15530(287)29327.3394(18)0-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pft:JBW_01943(333)26930.5394
0-- K01971  ligD  [tr:I9NUX3_9FIRM] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pyc:TQ32_08710(559)29331.7394
0-- K10747  LIG1  [tr:A0A127BCM3_9EURY] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ton:TON_1515(562)29232.2394
0-- K10747  LIG1  [sp:DNLI_THEON] thermostable DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> twi:Thewi_2144(307)30027.0393
0-- K01971  ligD  [tr:G2MTV9_9THEO] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mil:ML5_0458(319)31031.0392(108)18-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfi:PFC_10430(561)29130.6392
1-- K10747  LIG1  [tr:I6V1U3_9EURY] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pfu:PF1635(561)29130.6392
1-- K10747  LIG1  [sp:DNLI_PYRFU] DNA ligase (lig); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> kphy:AOZ06_15230(477)25430.3391(74)0-- K01971  ligD  [tr:A0A0N9I0U0_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_05316(761)31229.5390(64)9-- K01971  ligD  [tr:L0J2H8_9MYCO] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mft:XA26_13320(758)31328.4389(118)0-- K01971  ligD  [tr:A0A0N9XNX0_MYCFO] ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myv:G155_06665(758)31328.4389(121)7-- K01971  ligD  [tr:A0A0A1FKS4_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nno:NONO_c07420(763)25131.5387(130)12-- K01971  ligD  [tr:W5T891_9NOCA] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tko:TK2140(562)29230.8387
1-- K10747  LIG1  [sp:DNLI_THEKO] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> all:CRK60828(484)25232.5386(84)0-- K01971  ligD  [tr:A0A0H5CSB1_9PSEU] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgm:PGRAT_14595(287)29027.6386(125)1-- K10747  LIG1  [tr:A0A089MB43_9BACL] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ruf:TH63_03090(857)30230.5386()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> teu:TEU_01440(559)29231.2386
0-- K10747  LIG1  [tr:A0A097QRK5_9EURY] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tgg:A3K92_02555(559)29331.4386
0-- K10747  LIG1 DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tgy:X802_01500(559)29231.5385
0-- K10747  LIG1  [tr:A0A0X1KIB4_9EURY] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> thm:CL1_1197(559)29131.6385
0-- K10747  LIG1  [tr:I3ZUL6_9EURY] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ag:CAC21199(559)29330.0382(135)1-- K10747  LIG1  [sp:DNLI_THEFM] lig; DNA ligase (ATP or NAD+) (EC:6.5.1.6); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tbs:A3L01_08440(559)29131.3382
0-- K10747  LIG1 DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bjp:RN69_09810(315)29928.1381(37)6--    DNA ligase
> bju:BJ6T_19970(315)29928.1381(37)8--     [tr:G7D608_BRAJP] hypothetical protein
> tsl:A3L11_01845(559)29432.0381
0-- K10747  LIG1 DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> slc:SL103_24545(323)20733.8380(105)0-- K01971  ligD  [tr:A0A1D7VQE6_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stp:Strop_3968(312)25532.9380(134)10-- K01971  ligD  [tr:A4XBU1_SALTO] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tcu:Tcur_1208(316)25731.9380
2-- K01971  ligD  [tr:D1A995_THECD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1796(327)30729.6379(123)7-- K01971  ligD  [tr:A0A0D4DI33_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tce:A3L02_06365(559)29130.6379
0-- K10747  LIG1  [tr:A0A218P2T2_THECE] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> thh:CDI07_08445(559)29131.3379
0-- K10747  LIG1  [tr:A0A1Z2TPE1_9EURY] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ppo:PPM_2737(286)28926.3378(48)3-- K10747  LIG1 ligB3; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> rhw:BFN03_13610(767)29030.7378(137)0-- K01971  ligD  [tr:A0A1D8T6P7_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mdx:BTO20_29155(752)31327.5377(120)0-- K01971  ligD  [tr:A0A1Y0CAT0_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pjd:Pjdr2_1127(287)28128.1377(143)1-- K10747  LIG1  [tr:C6CVU1_PAESJ] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ttd:A3L14_10840(559)29231.2377
0-- K10747  LIG1 DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> cceu:CBR64_00560(865)30631.4376(122)0-- K01971  ligD  [tr:A0A1Y0HSD3_CELCE] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcz:BN45_20239(759)30729.3376(126)6-- K01971  ligD Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mhad:B586_06195(759)31028.4376(139)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> the:GQS_07890(559)29130.9376
0-- K10747  LIG1  [tr:G0HLK1_THES4] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> lpil:LIP_2515(320)31730.9375()0-- K01971  ligD  [tr:A0A0K2SML1_9FIRM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mau:Micau_0484(319)31030.6375(94)8-- K01971  ligD  [tr:D9T7L9_MICAI] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mce:MCAN_09381(759)30729.3375(123)5-- K01971  ligD  [tr:G0TFT2_MYCCP] putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcq:BN44_11030(759)30729.3375(123)4-- K01971  ligD Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmar:MODMU_2075(489)25532.5375(135)14-- K01971  ligD  [tr:I4EVU7_9ACTN] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reb:XU06_21400(758)25531.4375(69)3-- K01971  ligD  [tr:A0A0E4AAH1_RHOER] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rey:O5Y_21290(760)25531.4375(146)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tnu:BD01_1570(559)29230.1375
0-- K10747  LIG1  [tr:W8P6M3_9EURY] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> jte:ASJ30_12690(311)25330.4374(139)0-- K01971  ligD  [tr:A0A1L3MLK8_9MICO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcv:BN43_20408(759)30729.0374(121)5-- K01971  ligD Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcx:BN42_20748(759)30729.3374(120)6-- K01971  ligD Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_04600(758)30529.2374(107)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nml:Namu_0128(831)25928.2374(126)13-- K01971  ligD  [tr:C8XIX5_NAKMY] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csu:CSUB_C1557(529)32127.1373(143)1-- K10747  LIG1  [tr:E6N8T6_9ARCH] DNA ligase 1; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pab:PAB2002(559)29330.4373
0-- K10747  LIG1  [sp:DNLI_PYRAB] lig DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tpep:A0127_04830(559)29230.1372
0-- K10747  LIG1  [tr:A0A142CXL5_9EURY] DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> paen:P40081_15495(287)29027.2371(122)2-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pys:Py04_1516(559)29329.7371
0-- K10747  LIG1  [tr:I3RFS7_9EURY] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> sesp:BN6_42910(492)31429.0371(94)23-- K01971  ligD  [tr:K0K408_SACES] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...