GFIT result for T00519

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

pth:PTH_1243
(324 a.a.)
 
--
 
K01971  ligD  CDC9; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> dku:Desku_0983(318)30859.41224
0<-    DNA polymerase LigD, ligase domain protein
> dca:Desca_1165(316)31050.61112
0<-    DNA polymerase LigD, ligase domain protein
> drm:Dred_2002(316)31251.31104
0<- K10747  LIG1 ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> mta:Moth_1488(320)31451.01065
1<- K10747  LIG1 ATP dependent DNA ligase, central; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> dgi:Desgi_1818(322)31050.31054
1<> K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1852(316)30750.81048
1<-    DNA polymerase LigD, ligase domain protein
> afu:AF_1725(313)30944.7797(402)1<- K01971  ligD DNA ligase, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afg:AFULGI_00019760(303)30644.8782(387)1<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ave:Arcve_0209(324)31241.7778(369)1<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmr:Tmar_1128(344)32143.6726
20<>    DNA polymerase LigD, ligase domain protein
> tit:Thit_1868(307)30539.0714
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmt:Tmath_1843(307)30539.0714
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)31540.6713(294)3-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ofo:BRW83_1415(318)30539.3712
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ast:Asulf_01568(331)31038.7706(295)1<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> twi:Thewi_2144(307)30539.3706
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sesp:BN6_42910(492)31540.0703(225)23<- K01971  ligD putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)31339.9701(305)13-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbo:Thebr_0487(307)30539.0701
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpd:Teth39_0475(307)30539.0701
0<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tex:Teth514_0952(307)30539.0700
0<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thx:Thet_1965(307)30539.0700
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tki:TKV_c19040(307)30539.0700
0<- K01971  ligD ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strc:AA958_07435(334)32840.2695(321)9-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_34920(477)31240.4695(187)2-> K01971  ligD DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> req:REQ_26630(323)31039.7691(168)5-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dti:Desti_0132(536)30938.5688
0->    DNA ligase D/DNA polymerase LigD
> gfo:GFO_0300(802)30737.5683(425)0<- K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> all:CRK60828(484)31538.4670(138)0-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gah:GAH_01512(327)31837.1669(269)1<- K01971  ligD DNA ligase D, ligase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pft:JBW_01943(333)32138.9669
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)31638.6666(281)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> byl:A4V09_04265(310)31636.7665
0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2515(320)32040.0658
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tid:Thein_1426(302)29738.7652
0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mim:AKG07_06770(658)32237.9650(255)6<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dtm:BJL86_2779(823)32137.4647
0<- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> micr:BMW26_11320(658)32237.9647(252)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> noa:BKM31_27980(334)31536.8646(13)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nsr:NS506_05464(316)31237.5646(115)0-- K01971  ligD DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pgs:CPT03_07335(844)32435.8645(399)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_15345(891)31837.7644(45)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puf:UFO1_2618(326)31835.8644(544)0<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> txy:Thexy_0579(307)30534.8638
0<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)31535.9638(416)1<- K01971  ligD ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csh:Closa_1417(307)30637.3636(31)1-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)32036.6636(385)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salt:AO058_01020(819)30836.7635(384)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tto:Thethe_00683(307)31334.2635
0<- K01971  ligD ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ttm:Tthe_0704(307)31334.8634
0<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)30935.3633(372)0<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsd:BLASA_3098(323)31338.0627(246)10<- K01971  ligD LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fri:FraEuI1c_4744(558)32138.3627(237)64-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)30934.3627(300)0-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsh:Tsac_1306(307)31333.9627
0<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoh:Hoch_3330(896)31037.7625(249)65<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)31636.1625(159)0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kphy:AOZ06_15230(477)31237.8624(226)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> muc:MuYL_0888(910)33536.7624(372)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asl:Aeqsu_3115(807)31636.1623(371)1<- K01971  ligD ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cceu:CBR64_00560(865)32136.4623(222)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcj:MCON_3253(315)31036.8623(269)1<- K10747  LIG1 ligD; DNA polymerase LigD, putative; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> chry:CEY12_12005(623)30536.1621()0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)32137.1621(356)2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> erb:A4V01_12235(310)30537.7621
0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grl:LPB144_07705(802)30536.7620(403)0<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtn:A6122_2623(831)30737.5620(234)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssx:SACTE_2357(320)31639.2620(194)7<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tcu:Tcur_1208(316)31337.4619
2<> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)31834.6618(401)4<- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmar:MODMU_2075(489)31036.1618(224)14<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_28605(484)31837.4617(92)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fal:FRAAL4382(581)31238.5615(229)122-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_2087(804)30936.2615(371)0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)32134.6615(372)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)30636.3614()1<- K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)31238.8613(34)78-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mao:MAP4_2518(332)30938.8613(37)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)30938.8613(37)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)30938.8613(37)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)30938.8613(37)0--    hypothetical protein
> cwo:Cwoe_4716(815)31337.1612(255)14-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mav:MAV_3148(332)30938.8612(33)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)30938.8612(42)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)30938.8612(42)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)30938.8612(42)3--    ATP-dependent DNA ligase
> cai:Caci_5248(495)31937.9611(220)9<> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD04033(313)30938.8611(72)8-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_24545(323)31036.5611(224)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)30835.4610(22)3-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_3103(853)32835.7608(108)0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpip:CJF12_16755(628)30736.2607(392)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_05332(602)31235.3607(69)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rrz:CS378_19505(325)31138.9607(35)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)30635.0605(3)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cry:B7495_07570(833)31536.5605(179)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphn:BV902_20470(912)31434.7605(345)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpal:BO218_04155(821)31538.4604(240)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rav:AAT18_03845(325)31139.5604(32)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ncy:NOCYR_3082(323)30938.2603(66)3-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...