GFIT result for
T00416
|
GFIT result for
T00416
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| reh:H16_B2393 (113 a.a.) |
-- |
h16_B2393; fragment of ATP-dependent DNA ligase | ||||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|---|
| > rpj:N234_31565(210) | 113 | 75.2 | 596 | (457) | 4 | -- | hypothetical protein | |||
| > cnc:CNE_1c12130(210) | 113 | 61.9 | 448 | (303) | 4 | -- | hypothetical protein | |||
| > fgi:OP10G_3151(680) | 96 | 37.5 | 228 | (37) | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > geb:GM18_0111(892) | 86 | 47.7 | 227 | () | 2 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vma:VAB18032_06515(302) | 103 | 43.7 | 223 | (74) | 11 | -- | K01971 | ligD | DNA polymerase LigD ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ank:AnaeK_0832(684) | 86 | 47.7 | 221 | (81) | 136 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vg:7943927(262) | 90 | 45.6 | 221 | (27) | 26 | -- | BcepIL02_gp43; Burkholderia virus Bcepil02; putative DNA ligase | |||
| > acp:A2cp1_0836(683) | 86 | 47.7 | 218 | (75) | 136 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brad:BF49_3749(571) | 97 | 41.2 | 218 | (22) | 0 | -- | K01971 | ligD | ATPdependent DNA ligase EC 6511 clustered with Ku protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smeg:C770_GR4Chr2406(607) | 94 | 44.7 | 217 | (15) | 8 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mam:Mesau_02902(590) | 81 | 44.4 | 216 | (18) | 4 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pep:AQ505_12975(322) | 84 | 40.5 | 215 | (36) | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpd:RPD_2161(313) | 91 | 41.8 | 215 | (68) | 4 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpt:Rpal_2316(313) | 91 | 41.8 | 215 | (64) | 4 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gur:Gura_3452(534) | 82 | 43.9 | 214 | () | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > moc:BB934_30980(820) | 84 | 47.6 | 214 | (6) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > llu:AKJ09_05332(602) | 99 | 44.4 | 213 | (31) | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > baco:OXB_3302(607) | 106 | 36.8 | 212 | () | 0 | -- | K01971 | ligD | DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > grl:LPB144_07705(802) | 83 | 41.0 | 212 | () | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mbry:B1812_16500(819) | 86 | 43.0 | 212 | () | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cpi:Cpin_3242(657) | 100 | 38.0 | 211 | (29) | 3 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > jte:ASJ30_12690(311) | 102 | 40.2 | 211 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
| > mlo:mll4606(829) | 94 | 43.6 | 211 | (32) | 11 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pgm:PGRAT_14595(287) | 104 | 41.3 | 211 | (76) | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > btei:WS51_27065(938) | 91 | 45.1 | 210 | () | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > del:DelCs14_2489(875) | 92 | 42.4 | 210 | (110) | 10 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bdf:WI26_27455(921) | 91 | 45.1 | 209 | (107) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > blat:WK25_16550(957) | 91 | 45.1 | 209 | () | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > buz:AYM40_37600(634) | 87 | 43.7 | 209 | (59) | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dac:Daci_4339(871) | 92 | 42.4 | 209 | (100) | 10 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dhk:BO996_19460(871) | 92 | 42.4 | 209 | () | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lpil:LIP_2515(320) | 108 | 40.7 | 209 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
| > bcew:DM40_5175(957) | 91 | 45.1 | 208 | () | 16 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccro:CMC5_051300(404) | 83 | 47.0 | 208 | () | 7 | -- | K01971 | ligD | ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ddl:Desdi_2684(815) | 86 | 44.2 | 208 | () | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gfl:GRFL_2087(804) | 82 | 42.7 | 208 | (102) | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dor:Desor_2615(813) | 90 | 40.0 | 207 | () | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dts:BI380_07525(892) | 92 | 41.3 | 206 | (97) | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sno:Snov_0819(842) | 91 | 44.0 | 206 | (90) | 6 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psim:KR76_09220(313) | 82 | 46.3 | 205 | (95) | 2 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > saq:Sare_4352(313) | 103 | 40.8 | 205 | 12 | -- | K01971 | ligD | DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | ||
| > jaz:YQ44_08770(835) | 88 | 42.0 | 204 | () | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nwi:Nwi_0353(913) | 98 | 40.8 | 204 | () | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcq:PcP3B5_27230(850) | 90 | 42.2 | 204 | () | 0 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > stp:Strop_3968(312) | 102 | 39.2 | 204 | (98) | 10 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psyr:N018_16280(863) | 87 | 39.1 | 203 | () | 4 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > chu:CHU_2837(896) | 84 | 39.3 | 202 | () | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mesw:A9K65_004035(837) | 93 | 40.9 | 202 | (20) | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bced:DM42_7098(948) | 91 | 42.9 | 201 | () | 8 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bceo:I35_7581(928) | 91 | 42.9 | 201 | () | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mamo:A6B35_15055(831) | 83 | 47.0 | 201 | (11) | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdh:B9T62_15530(287) | 104 | 39.4 | 201 | (10) | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > bdl:AK34_5177(914) | 91 | 42.9 | 200 | () | 8 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbw:RR42_m1699(52) | 45 | 60.0 | 200 | 0 | -- | hypothetical protein | ||||
| > cpy:Cphy_1729(813) | 86 | 38.4 | 200 | () | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sgy:Sgly_0962(813) | 90 | 37.8 | 200 | () | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcen:DM39_7047(888) | 91 | 42.9 | 199 | () | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsl:WS57_15615(888) | 91 | 42.9 | 199 | () | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccel:CCDG5_0620(826) | 86 | 40.7 | 199 | () | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mci:Mesci_0783(837) | 93 | 40.9 | 199 | (17) | 6 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psw:LK03_18305(820) | 91 | 41.8 | 199 | (95) | 4 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhz:RHPLAN_36380(204) | 105 | 38.1 | 199 | (2) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sphr:BSY17_3129(825) | 86 | 41.9 | 199 | (33) | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcm:Bcenmc03_6073(927) | 91 | 42.9 | 198 | () | 6 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cez:CBP52_04755(307) | 100 | 40.0 | 198 | (25) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ele:Elen_1951(822) | 85 | 42.4 | 198 | () | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mcj:MCON_3253(315) | 100 | 41.0 | 198 | (53) | 1 | -- | K10747 | LIG1 | ligD; DNA polymerase LigD, putative; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mop:Mesop_0815(853) | 93 | 40.9 | 198 | (3) | 9 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > scl:sce3523(762) | 96 | 41.7 | 198 | (51) | 82 | -- | K01971 | ligD | unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smi:BN406_05994(628) | 110 | 37.3 | 198 | (21) | 11 | -- | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aaa:Acav_2693(936) | 95 | 41.1 | 197 | (89) | 28 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aav:Aave_2519(939) | 95 | 41.1 | 197 | () | 85 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bch:Bcen2424_6483(936) | 91 | 42.9 | 197 | (51) | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcn:Bcen_1346(936) | 91 | 42.9 | 197 | () | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > esj:SJ05684_c11410(617) | 110 | 38.2 | 197 | (18) | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nmv:NITMOv2_2657(895) | 88 | 40.9 | 197 | (88) | 3 | -- | K01971 | ligD | ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ote:Oter_4309(603) | 81 | 42.0 | 197 | () | 5 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pst:PSPTO_3464(851) | 83 | 41.0 | 197 | () | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smer:DU99_30115(628) | 110 | 37.3 | 197 | (20) | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smk:Sinme_5055(628) | 110 | 37.3 | 197 | (20) | 3 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smx:SM11_pD0933(636) | 110 | 37.3 | 197 | (20) | 11 | -- | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ade:Adeh_0784(658) | 86 | 44.2 | 196 | (65) | 105 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bph:Bphy_7582(651) | 83 | 41.0 | 196 | (7) | 5 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsem:WJ12_16950(931) | 91 | 44.0 | 196 | () | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phh:AFB00_09680(313) | 84 | 41.7 | 196 | (77) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vaa:AX767_14310(838) | 89 | 39.3 | 196 | () | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bne:DA69_04445(612) | 95 | 45.3 | 195 | (66) | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cih:ATE47_01435(900) | 96 | 37.5 | 195 | (17) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fla:SY85_09220(907) | 95 | 36.8 | 195 | (50) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mln:A9174_03965(829) | 93 | 39.8 | 195 | (15) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psea:WY02_17950(304) | 84 | 42.9 | 195 | (54) | 18 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pspw:BJG93_34680(200) | 97 | 40.2 | 195 | (17) | 0 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > aza:AZKH_2968(851) | 90 | 41.1 | 194 | (91) | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bop:AXW83_17900(850) | 92 | 41.3 | 194 | (25) | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mes:Meso_1150(845) | 90 | 38.9 | 194 | (68) | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sme:SM_b21044(636) | 110 | 37.3 | 194 | (17) | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smel:SM2011_b21044(636) | 110 | 37.3 | 194 | (17) | 7 | -- | K01971 | ligD | Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smq:SinmeB_4042(628) | 110 | 36.4 | 194 | (17) | 5 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > xga:BI317_00950(924) | 89 | 41.6 | 194 | (48) | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > xhr:XJ27_16255(924) | 89 | 41.6 | 194 | (48) | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |