GFIT result for T00317

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ret:RHE_CH00617
(659 a.a.)
 
--
 
K01971  E6.5.1.1  [tr:Q2KCK3_RHIEC] DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rel:REMIM1_CH00627(659)65999.44410(2746)13<> K01971  E6.5.1.1  [tr:S5RZC5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)64288.53851(2193)22<> K01971  E6.5.1.1  [tr:B3PPH4_RHIE6] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> agr:AGROH133_09757(830)66066.22983(1343)11<> K01971  E6.5.1.1  [tr:F0LE72_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sfd:USDA257_c16580(850)64460.62694(1113)29-> K01971  E6.5.1.1  [tr:I3X2Z1_RHIFR] ykoU2; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)65660.12667(1402)18<> K01971  E6.5.1.1  [tr:L0M010_RHITR] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rhi:NGR_b04710(850)64760.02663(1103)26<> K01971  E6.5.1.1  [tr:Q6W1H3_RHISN] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> atu:Atu4632(771)59865.62644(1021)11-> K01971  E6.5.1.1  [tr:A9CGX3_AGRT5] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sno:Snov_0819(842)66058.92565(2371)44<> K01971  E6.5.1.1  [tr:D7A5M0_STAND] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> msc:BN69_1443(852)65157.62540(2392)21<> K01971  E6.5.1.1  [tr:J7Q463_METSZ] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> azc:AZC_1006(900)64158.22510(2331)96<> K01971  E6.5.1.1  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mes:Meso_1150(845)65657.22503(1708)23<> K01971  E6.5.1.1  [tr:Q11J79_MESSB] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bid:Bind_0382(644)61760.12502(1758)4<> K01971  E6.5.1.1  [tr:B2IE11_BEII9] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gdi:GDI_0169(856)66555.62440(2333)77<> K01971  E6.5.1.1  [tr:A9H268_GLUDA] DNA ligase-like protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gdj:Gdia_2239(856)66555.32432(2332)78<> K01971  E6.5.1.1  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> oan:Oant_4315(834)66254.22400(2200)17<> K01971  E6.5.1.1  [tr:A6X711_OCHA4] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mop:Mesop_0815(853)68347.72097(677)26<> K01971  E6.5.1.1  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rva:Rvan_0633(970)68249.02089(1886)66<> K01971  E6.5.1.1  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mlo:mll4606(829)66248.32084(503)25-- K01971  E6.5.1.1  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mci:Mesci_0783(837)67047.62078(638)21<> K01971  E6.5.1.1  [tr:E8TFS2_MESCW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mam:Mesau_00823(846)67647.52065(646)18<> K01971  E6.5.1.1  [tr:L0KDE8_MESAW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> scu:SCE1572_21330(687)67343.21794(650)192-- K01971  E6.5.1.1  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aex:Astex_1372(847)63442.71744(1519)3<> K01971  E6.5.1.1  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> daf:Desaf_0308(931)64642.91720(1603)25<> K01971  E6.5.1.1  [tr:F3YU59_DESAF] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> scl:sce3523(762)69140.81710(1431)439-- K01971  E6.5.1.1  [tr:A9GRV1_SORC5] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlt:Rleg2_5705(883)69142.51703(217)24-- K01971  E6.5.1.1  [tr:B6A397_RHILW] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlb:RLEG3_09760(881)69142.41696(159)24--    ATP-dependent DNA ligase
> aca:ACP_3506(863)66642.51688(1453)7<> K01971  E6.5.1.1  [tr:C1F736_ACIC5] DNA ligase, ATP-dependent; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlg:Rleg_5341(881)64243.61687(25)12-- K01971  E6.5.1.1  [tr:C6B636_RHILS] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)68841.91684(86)23-- K01971  E6.5.1.1  [tr:M4IHC4_RHIML] DNA ligase D (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smi:BN406_03940(878)68941.81684(88)27-- K01971  E6.5.1.1  [tr:K0PIY0_RHIML] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cse:Cseg_3113(883)67841.71682(1459)50-- K01971  E6.5.1.1  [tr:D5VM30_CAUST] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rir:BN877_p0677(883)67042.71678(178)18-- K01971  E6.5.1.1  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cak:Caul_1769(918)65642.51675(1470)61-- K01971  E6.5.1.1  [tr:B0T3L2_CAUSK] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smx:SM11_pC1486(878)68842.01672(76)29-- K01971  E6.5.1.1  [tr:F7XBX2_SINMM] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> xau:Xaut_4365(886)66542.91667(1496)49-- K01971  E6.5.1.1  [tr:A7INJ2_XANP2] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> tsa:AciPR4_1657(957)66941.01651(1479)23<> K01971  E6.5.1.1  [tr:E8V3A7_TERSS] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gma:AciX8_1368(920)68140.41648(1439)13<> K01971  E6.5.1.1  [tr:G8NZZ5_GRAMM] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rle:pRL120229(881)69141.21644(789)16-- K01971  E6.5.1.1  [tr:Q1M4N0_RHIL3] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cbu:CBU_1934(815)60842.41639(1536)1<> K01971  E6.5.1.1  [tr:Q83AG5_COXBU] DNA ligase D (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cbc:CbuK_0042(815)60742.01631(1528)2<> K01971  E6.5.1.1  [tr:B6J952_COXB1] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cbg:CbuG_0044(815)60742.01631(1530)1<> K01971  E6.5.1.1  [tr:B6J2C9_COXB2] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)60842.31628(1527)0<> K01971  E6.5.1.1  [tr:A9NBB8_COXBR] ligD; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> avi:Avi_8017(893)67941.21618(776)22<- K01971  E6.5.1.1  [tr:B9K4A7_AGRVS] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pmy:Pmen_3217(837)63540.31618(1438)25<> K01971  E6.5.1.1  [tr:A4XXA4_PSEMY] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> nha:Nham_3907(900)69640.81617(11)28-- K01971  E6.5.1.1  [tr:Q1QGQ0_NITHX] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ssy:SLG_04290(835)63642.31613(1315)26-- K01971  E6.5.1.1  [tr:G2IL41_9SPHN] putative DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pzu:PHZ_c3259(887)68041.51611(911)86-- K01971  E6.5.1.1  [tr:B4RAS0_PHEZH] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> trs:Terro_2462(949)69438.91608(1189)28-- K01971  E6.5.1.1  [tr:I3ZHJ5_TERRK] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> afw:Anae109_0832(656)65140.11607(482)85-- K01971  E6.5.1.1  [tr:A7H8J7_ANADF] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mei:Msip34_2574(870)67638.01606(1506)5<> K01971  E6.5.1.1  [tr:C6XB41_METSD] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sch:Sphch_2999(835)65541.51603(1412)32<> K01971  E6.5.1.1  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pla:Plav_2977(845)66141.11596(1445)6<> K01971  E6.5.1.1  [tr:A7HXF1_PARL1] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sme:SMc03959(865)68041.31596(159)22-- K01971  E6.5.1.1  [tr:Q92M95_RHIME] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smel:SM2011_c03959(865)68041.31596(154)23-- K01971  E6.5.1.1  [tr:M4MX75_RHIML] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smk:Sinme_2798(865)68041.31596(152)16-- K01971  E6.5.1.1  [tr:F6E149_SINMK] DNA polymerase LigD polymerase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smq:SinmeB_2574(865)68041.31596(149)20-- K01971  E6.5.1.1  [tr:F6BTY7_SINMB] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bja:bll6773(892)70240.31592(819)31-- K01971  E6.5.1.1  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> brs:S23_15390(889)67440.21588(1327)19-> K01971  E6.5.1.1  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sphm:G432_04400(849)61543.41588(1382)46<> K01971  E6.5.1.1  [tr:M4SD88_9SPHN] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bju:BJ6T_26450(888)67940.91587(846)32<- K01971  E6.5.1.1  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> msl:Msil_1736(888)69040.71587(830)54<- K01971  E6.5.1.1  [tr:B8EKE2_METSB] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psa:PST_2130(851)66639.21586(948)11-- K01971  E6.5.1.1  [tr:A4VLE4_PSEU5] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> acm:AciX9_2128(914)62340.01583(1155)10<> K01971  E6.5.1.1  [tr:E8X211_ACISM] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ank:AnaeK_0832(684)66340.91583(859)467-- K01971  E6.5.1.1  [tr:B4UEC1_ANASK] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)69439.61583(1340)37-- K01971  E6.5.1.1  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psz:PSTAB_2018(851)66639.01580(955)14-- K01971  E6.5.1.1  [tr:F8HAP9_PSEUT] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pmk:MDS_2413(842)64039.51579(1407)13<> K01971  E6.5.1.1  [tr:F4DU16_PSEMN] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfe:PSF113_2933(871)66839.51577(212)26-- K01971  E6.5.1.1  [tr:G8Q248_PSEFL] ligD2; protein LigD (EC:1.11.1.9 6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfc:PflA506_2574(837)65640.41574(42)17<> K01971  E6.5.1.1  [tr:I2BVQ6_PSEFL] ligD_1; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pput:L483_11550(821)61941.81574(79)23-- K01971  E6.5.1.1  [tr:R9V1S5_PSEPU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpa:RPA3650(914)69839.41574(1338)47-- K01971  E6.5.1.1  [tr:Q6N3P3_RHOPA] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smd:Smed_2631(865)66242.41573(115)17-- K01971  E6.5.1.1  [tr:A6UCT1_SINMW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> acp:A2cp1_0836(683)66040.81572(861)434-- K01971  E6.5.1.1  [tr:B8JDU3_ANAD2] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ade:Adeh_0784(658)63841.21572(921)365-- K01971  E6.5.1.1  [tr:Q2IP30_ANADE] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hse:Hsero_2271(856)67840.01572(1380)21<> K01971  E6.5.1.1  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfs:PFLU2911(838)63139.91570(1387)23<> K01971  E6.5.1.1  [tr:C3KAZ9_PSEFS] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pba:PSEBR_a2838(871)66839.21566(203)23-- K01971  E6.5.1.1  [tr:F2KHD2_PSEBN] DNA ligase (ATP); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pst:PSPTO_3464(851)65640.11563(1418)22<> K01971  E6.5.1.1  [tr:Q87ZG5_PSESM] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psh:Psest_2179(854)66738.51562(906)16-- K01971  E6.5.1.1  [tr:L0GIZ3_PSEST] ATP-dependent DNA ligase LigD phosphoesterase module; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpc:RPC_3685(911)69140.11561(1355)43-- K01971  E6.5.1.1  [tr:Q210G6_RHOPB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sfh:SFHH103_02797(865)66041.41560(93)16-- K01971  E6.5.1.1  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cti:RALTA_B2120(916)67840.61555(68)93-- K01971  E6.5.1.1  [tr:B3RCS2_CUPTR] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppz:H045_08195(1124)64739.71554(1388)16-- K01971  E6.5.1.1  [tr:M4JYH5_9PSED] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> nwi:Nwi_0353(913)69339.41553(1363)35-- K01971  E6.5.1.1  [tr:Q3SVS1_NITWN] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aol:S58_17960(909)68640.41551(1279)42-- K01971  E6.5.1.1  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bbt:BBta_6329(895)68840.61551(892)40-- K01971  E6.5.1.1  [tr:A5EQ03_BRASB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpt:Rpal_4171(914)69439.51551(828)49-- K01971  E6.5.1.1  [tr:B3QGJ0_RHOPT] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psv:PVLB_14550(822)63139.81549(1439)9-- K01971  E6.5.1.1  [tr:U5VFX4_9PSED] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psj:PSJM300_09695(840)64139.21547(840)11-- K01971  E6.5.1.1  [tr:I6ZF88_PSEST] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppuh:B479_13240(830)63940.21546(1394)20-- K01971  E6.5.1.1  [tr:L0FHZ0_PSEPU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfo:Pfl01_2097(848)62440.71540(1351)15-- K01971  E6.5.1.1  [tr:Q3KEG6_PSEPF] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psb:Psyr_3245(866)65739.71540(1392)27<> K01971  E6.5.1.1  [tr:Q4ZRE5_PSEU2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bra:BRADO5823(904)67940.11538(1305)32-- K01971  E6.5.1.1  [tr:A4Z011_BRASO] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> byi:BYI23_A015080(904)67139.81536(96)12<- K01971  E6.5.1.1  [tr:G8M3M4_9BURK] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpb:RPB_1876(914)67839.51536(1302)36<- K01971  E6.5.1.1  [tr:Q2IYX6_RHOP2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> nmu:Nmul_A1177(853)61439.71533(1428)2<> K01971  E6.5.1.1  [tr:Q2Y9U1_NITMU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)64441.61533(1332)23<> K01971  E6.5.1.1  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ajs:Ajs_2523(837)64540.01532(1331)46<> K01971  E6.5.1.1  [tr:A1W8V8_ACISJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bcm:Bcenmc03_6073(927)69238.91532(1419)52<> K01971  E6.5.1.1  [tr:B1KAE7_BURCC] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppw:PputW619_2651(832)63639.91528(1358)20-- K01971  E6.5.1.1  [tr:B1J8U5_PSEPW] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
... ... ...