GFIT result for T00317

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ret:RHE_PE00251
(354 a.a.)
 
--
 
K01971  E6.5.1.1  [tr:Q2K0P1_RHIEC] DNA ligase (ATP) protein (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rel:REMIM1_PD00264(354)35499.22357(537)6<> K01971  E6.5.1.1  [tr:S5S4J4_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rec:RHECIAT_PA0000196(354)35491.52198(732)5<> K01971  E6.5.1.1  [tr:B3Q1I4_RHIE6] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlt:Rleg2_5730(350)34676.61852(385)6-- K01971  E6.5.1.1  [tr:B6A3C2_RHILW] DNA polymerase LigD, ligase domain protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rle:pRL120212(348)34676.91841(349)8-- K01971  E6.5.1.1  [tr:Q1M4P7_RHIL3] DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlg:Rleg_5331(346)34676.31835(354)5-- K01971  E6.5.1.1  [tr:C6B627_RHILS] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rtr:RTCIAT899_PB00395(354)35174.61827(981)3-- K01971  E6.5.1.1  [tr:L0LRP5_RHITR] putative ATP-dependent DNA ligase protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rir:BN877_p0681(343)34273.11756(434)6<- K01971  E6.5.1.1  [tr:U4QFY4_9RHIZ] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sme:SMa0424(346)34774.41741(634)10<-     [tr:Q930H2_RHIME] ATP-dependent DNA ligase
> smel:SM2011_a0424(346)34774.41741(634)10<- K01971  E6.5.1.1  [tr:M4MF26_RHIML] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> atu:Atu5051(345)34272.51728(354)6<-     [tr:A9CLR5_AGRT5] ATP-dependent DNA ligase
> smx:SM11_pC1481(314)31874.21585(472)14<- K01971  E6.5.1.1  [tr:F7XBW7_SINMM] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smi:BN406_03945(290)29076.91502(373)13-- K01971  E6.5.1.1  [tr:K0PIY2_RHIML] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> agr:AGROH133_14625(350)35258.51348(578)4-- K01971  E6.5.1.1  [tr:F0LG13_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smq:SinmeB_1662(336)32854.31164(235)12-- K01971  E6.5.1.1  [tr:F6BMT3_SINMB] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sfh:SFHH103_01641(327)32552.61159(462)10-- K01971  E6.5.1.1  [tr:G9A7A8_RHIFH] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sfd:USDA257_c29030(324)31253.81153(162)9-- K01971  E6.5.1.1  [tr:I3X6G8_RHIFR] DNA ligase-like protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smd:Smed_1305(343)31254.81128(268)8-- K01971  E6.5.1.1  [tr:A6U925_SINMW] DNA polymerase LigD ligase region; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smeg:C770_GR4pC0194(205)20573.7988(218)9-- K01971  E6.5.1.1  [tr:M4IKE9_RHIML] ATP dependent DNA ligase C terminal region/ATP dependent DNA ligase domain protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> msl:Msil_3103(336)32443.8869(193)2--     [tr:B8EKY4_METSB] DNA polymerase LigD, ligase domain-containing protein
> rva:Rvan_0633(970)31844.7864(638)66<- K01971  E6.5.1.1  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bid:Bind_0382(644)31245.5850(636)4<- K01971  E6.5.1.1  [tr:B2IE11_BEII9] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hdt:HYPDE_32333(356)35138.2835(589)3<> K01971  E6.5.1.1  [tr:N0BDC6_9RHIZ] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gdj:Gdia_2239(856)32644.5830(720)78<- K01971  E6.5.1.1  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gdi:GDI_0169(856)32644.2823(712)77<- K01971  E6.5.1.1  [tr:A9H268_GLUDA] DNA ligase-like protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mop:Mesop_0815(853)31644.3822(112)26<- K01971  E6.5.1.1  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> scu:SCE1572_21330(687)30841.9820(394)192-- K01971  E6.5.1.1  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hmc:HYPMC_2434(356)34240.9814(582)3<> K01971  E6.5.1.1  [tr:F8JHK1_HYPSM] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mam:Mesau_00823(846)31644.6814(85)18<- K01971  E6.5.1.1  [tr:L0KDE8_MESAW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rhi:NGR_b04710(850)30544.9814(117)26<- K01971  E6.5.1.1  [tr:Q6W1H3_RHISN] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mci:Mesci_0783(837)31644.0812(170)21<- K01971  E6.5.1.1  [tr:E8TFS2_MESCW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mlo:mll4606(829)30045.0805(144)25-- K01971  E6.5.1.1  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> scl:sce3523(762)33838.8794(499)439-- K01971  E6.5.1.1  [tr:A9GRV1_SORC5] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> azc:AZC_1006(900)36439.6792(601)96<- K01971  E6.5.1.1  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> axy:AXYL_06730(840)34239.5788(20)41-- K01971  E6.5.1.1  [tr:E3HY60_ACHXA] ligD2; DNA ligase D 2 (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> oan:Oant_4315(834)34342.0785(583)17<- K01971  E6.5.1.1  [tr:A6X711_OCHA4] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pput:L483_17380(833)34639.3781(52)20-- K01971  E6.5.1.1  [tr:R9V746_PSEPU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> reu:Reut_B5079(901)35638.5781(159)24-- K01971  E6.5.1.1  [tr:Q46R07_CUPPJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppg:PputGB1_2635(833)34640.2780(546)14-- K01971  E6.5.1.1  [tr:B0KSK9_PSEPG] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sno:Snov_0819(842)31743.8777(545)44<- K01971  E6.5.1.1  [tr:D7A5M0_STAND] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpd:RPD_2161(313)29942.8775(113)5-- K01971  E6.5.1.1  [tr:Q138U3_RHOPS] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpt:Rpal_2316(313)29942.8775(96)6-- K01971  E6.5.1.1  [tr:B3QDT3_RHOPT] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> axn:AX27061_4222(874)34538.3774(439)117<- K01971  E6.5.1.1 ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mpt:Mpe_B0011(864)30837.3773(514)22-- K01971  E6.5.1.1  [tr:A2SMK3_METPP] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bju:BJ6T_42920(306)31539.7772(34)9-- K01971  E6.5.1.1  [tr:G7D3T3_BRAJP] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psd:DSC_15030(830)36338.0772(651)45<- K01971  E6.5.1.1  [tr:G7UVI9_PSEUP] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> axo:NH44784_059851(870)34937.8771(439)107<- K01971  E6.5.1.1  [tr:R4XZE0_ALCXX] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bja:blr8022(306)31440.4770(97)8-- K01971  E6.5.1.1  [tr:Q89BX6_BRADU] DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppi:YSA_10746(833)34739.2770(313)19-- K01971  E6.5.1.1  [tr:I3V4C3_PSEPU] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> afw:Anae109_0832(656)31539.7769(150)85-- K01971  E6.5.1.1  [tr:A7H8J7_ANADF] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppb:PPUBIRD1_2515(834)34638.7768(530)19-- K01971  E6.5.1.1  [tr:E4RDG6_PSEPB] ligD; LigD; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppu:PP_3260(833)34638.7768(531)13-- K01971  E6.5.1.1  [tr:Q88HU3_PSEPK] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppx:T1E_5615(833)34739.2766(531)13-- K01971  E6.5.1.1  [tr:I7CDZ3_PSEPT] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aaa:Acav_2693(936)36538.1760(509)139<- K01971  E6.5.1.1  [tr:F0Q2F4_ACIAP] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hdn:Hden_1069(356)35236.4758(520)2<> K01971  E6.5.1.1  [tr:D8JV67_HYPDA] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pla:Plav_2977(845)33140.5757(654)6<- K01971  E6.5.1.1  [tr:A7HXF1_PARL1] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mes:Meso_1150(845)30341.3752(439)23<- K01971  E6.5.1.1  [tr:Q11J79_MESSB] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psv:PVLB_14550(822)33038.2751(628)9-- K01971  E6.5.1.1  [tr:U5VFX4_9PSED] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppuh:B479_13240(830)34736.9749(500)20-- K01971  E6.5.1.1  [tr:L0FHZ0_PSEPU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> vap:Vapar_1660(847)33438.9749(472)35-- K01971  E6.5.1.1  [tr:C5CTW0_VARPS] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> msc:BN69_1443(852)35637.1748(538)21<- K01971  E6.5.1.1  [tr:J7Q463_METSZ] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psh:Psest_2179(854)36737.1748(568)16-- K01971  E6.5.1.1  [tr:L0GIZ3_PSEST] ATP-dependent DNA ligase LigD phosphoesterase module; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pmon:X969_12915(830)34736.9747(503)17-- K01971  E6.5.1.1 ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pmot:X970_12560(830)34736.9747(503)17-- K01971  E6.5.1.1 ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppf:Pput_2501(833)34737.8747(512)18-- K01971  E6.5.1.1  [tr:A5W3C6_PSEP1] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppt:PPS_2715(830)34736.9747(503)19-- K01971  E6.5.1.1  [tr:F8FV15_PSEPU] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smk:Sinme_5055(628)32240.7746(35)10--     [tr:F6E9N8_SINMK] DNA ligase D
> ajs:Ajs_2523(837)34338.8745(462)46<- K01971  E6.5.1.1  [tr:A1W8V8_ACISJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psa:PST_2130(851)35638.5745(541)11-- K01971  E6.5.1.1  [tr:A4VLE4_PSEU5] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> eyy:EGYY_19050(833)34538.8744()4-- K01971  E6.5.1.1  [tr:F7UV10_EEGSY] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psz:PSTAB_2018(851)35538.0744(540)14-- K01971  E6.5.1.1  [tr:F8HAP9_PSEUT] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> daf:Desaf_0308(931)34837.9743()25<- K01971  E6.5.1.1  [tr:F3YU59_DESAF] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ade:Adeh_0784(658)31139.2740(353)365-- K01971  E6.5.1.1  [tr:Q2IP30_ANADE] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> nmu:Nmul_A1177(853)35939.3740(632)2<- K01971  E6.5.1.1  [tr:Q2Y9U1_NITMU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> acp:A2cp1_0836(683)31038.7738(380)434-- K01971  E6.5.1.1  [tr:B8JDU3_ANAD2] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cti:pRALTA_0093(845)31940.4737(16)27-- K01971  E6.5.1.1  [tr:B2AJW4_CUPTR] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> vpd:VAPA_1c17500(851)33337.8737(447)37-- K01971  E6.5.1.1  [tr:T1X8H8_VARPD] putative DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ank:AnaeK_0832(684)31138.3732(374)467-- K01971  E6.5.1.1  [tr:B4UEC1_ANASK] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pol:Bpro_3003(882)30240.4729(626)22<- K01971  E6.5.1.1  [tr:Q128X5_POLSJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppw:PputW619_2651(832)35536.9729(499)20-- K01971  E6.5.1.1  [tr:B1J8U5_PSEPW] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aav:Aave_2519(939)33339.0728(456)246<- K01971  E6.5.1.1  [tr:A1TQ54_ACIAC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfo:Pfl01_2097(848)30640.5728(521)15-- K01971  E6.5.1.1  [tr:Q3KEG6_PSEPF] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfv:Psefu_2816(852)35536.3728(540)19<- K01971  E6.5.1.1  [tr:F6AI24_PSEF1] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bgl:bglu_1g10900(905)37937.7727(492)323<- K01971  E6.5.1.1  [tr:C5ADZ9_BURGB] DNA primase small subunit; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cfu:CFU_1974(830)31337.1727(596)10<- K01971  E6.5.1.1  [tr:G0A8U2_COLFT] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ppun:PP4_30630(822)31338.7727(491)17-- K01971  E6.5.1.1  [tr:T2HA29_PSEPU] ligD; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> dac:Daci_4339(871)30840.3725(469)75<- K01971  E6.5.1.1  [tr:A9BWY5_DELAS] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> del:DelCs14_2489(875)30340.3725(459)75<- K01971  E6.5.1.1  [tr:F6B0K4_DELSC] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bph:Bphy_7582(651)33936.6724(37)9--     [tr:B2JY06_BURP8] DNA ligase D
> sphm:G432_04400(849)35038.6724(467)46<- K01971  E6.5.1.1  [tr:M4SD88_9SPHN] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aex:Astex_1372(847)33637.8722(458)3<- K01971  E6.5.1.1  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> vpe:Varpa_2796(854)35336.8722(42)28-- K01971  E6.5.1.1  [tr:E6V3W5_VARPE] DNA ligase d; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hse:Hsero_2271(856)35937.0721(500)21<- K01971  E6.5.1.1  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfe:PSF113_2933(871)34337.6720(141)26-- K01971  E6.5.1.1  [tr:G8Q248_PSEFL] ligD2; protein LigD (EC:1.11.1.9 6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psj:PSJM300_09695(840)33738.6720(527)11-- K01971  E6.5.1.1  [tr:I6ZF88_PSEST] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pzu:PHZ_c3259(887)33738.6720(226)86-- K01971  E6.5.1.1  [tr:B4RAS0_PHEZH] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rge:RGE_26430(851)34438.1720(475)142-- K01971  E6.5.1.1  [tr:I0HSJ5_RUBGI] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rsl:RPSI07_2772(872)32341.5720(609)75<- K01971  E6.5.1.1 ATP dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> xau:Xaut_4365(886)34039.4720(486)49-- K01971  E6.5.1.1  [tr:A7INJ2_XANP2] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bpt:Bpet3441(822)35737.8718(599)41<- K01971  E6.5.1.1  [tr:A9HXI5_BORPD] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sus:Acid_3033(643)30841.2718(75)11-- K01971  E6.5.1.1  [tr:Q022T8_SOLUE] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
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