GFIT result for
rko
|
GFIT result for
rko
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rko:JWS14_28085 (347 a.a.) |
-- |
ATP-dependent DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rop:ROP_51680(347) | 347 | 97.7 | 2301 | 7 | <> | ligC; ATP-dependent DNA ligase LigC | |||
| > rha:RHA1_ro05107(347) | 347 | 97.4 | 2298 | 9 | <> | possible DNA ligase (ATP), C-terminal | |||
| > rpsk:JWS13_16495(347) | 347 | 96.8 | 2288 | 5 | <> | ATP-dependent DNA ligase | |||
| > roa:Pd630_LPD01627(347) | 347 | 96.3 | 2279 | 9 | <> | putative DNA ligase | |||
| > roz:CBI38_25630(347) | 347 | 89.6 | 2156 | 7 | <> | ATP-dependent DNA ligase | |||
| > rhw:BFN03_00555(342) | 342 | 88.3 | 2085 | 1 | -> | ATP-dependent DNA ligase | |||
| > reb:XU06_24025(348) | 347 | 80.7 | 1963 | 2 | <> | ATP-dependent DNA ligase | |||
| > rer:RER_49760(348) | 347 | 80.7 | 1963 | 2 | <> | ligC; ATP-dependent DNA ligase LigC | |||
| > rqi:C1M55_25180(348) | 347 | 81.0 | 1959 | 1 | <> | ATP-dependent DNA ligase | |||
| > rgo:KYT97_24265(348) | 347 | 80.7 | 1957 | 1 | <> | ATP-dependent DNA ligase | |||
| > rhod:AOT96_04935(348) | 347 | 80.4 | 1939 | 3 | <> | ATP-dependent DNA ligase | |||
| > rey:O5Y_23610(343) | 342 | 81.0 | 1938 | 1 | <> | ligC; ATP-dependent DNA ligase | |||
| > rtm:G4H71_12495(347) | 348 | 77.3 | 1852 | 3 | -> | ATP-dependent DNA ligase | |||
| > req:REQ_42500(357) | 357 | 75.1 | 1832 | 5 | -> | ATP-dependent DNA ligase | |||
| > rhs:A3Q41_01836(349) | 348 | 75.3 | 1815 | 5 | -> | ligC; DNA ligase C1 | |||
| > rfa:A3L23_01523(349) | 348 | 75.0 | 1810 | 5 | -> | ligC; DNA ligase C1 | |||
| > rhb:NY08_3356(349) | 348 | 74.7 | 1799 | 2 | -> | ATP-dependent DNA ligase LigC | |||
| > rcr:NCTC10994_02969(382) | 350 | 73.7 | 1759 | 5 | <> | ligC; ATP-dependent DNA ligase LigC | |||
| > rgor:NMQ04_18895(354) | 349 | 73.4 | 1752 | 3 | <> | ATP-dependent DNA ligase | |||
| > rrt:4535765_04417(357) | 350 | 73.1 | 1739 | 6 | <> | ligC; ATP-dependent DNA ligase LigC | |||
| > rby:CEJ39_23025(354) | 350 | 73.1 | 1738 | 4 | <> | ATP-dependent DNA ligase | |||
| > rhq:IM25_03815(354) | 350 | 73.1 | 1735 | 4 | <> | ATP-dependent DNA ligase | |||
| > rpy:Y013_12145(354) | 350 | 72.6 | 1722 | 3 | <> | ATP-dependent DNA ligase | |||
| > rav:AAT18_23215(355) | 350 | 71.4 | 1712 | 7 | <> | ATP-dependent DNA ligase | |||
| > rrz:CS378_12990(355) | 350 | 71.4 | 1711 | 11 | <> | ATP-dependent DNA ligase | |||
| > rhu:A3Q40_03935(351) | 347 | 72.3 | 1698 | 2 | <> | ligC_2; DNA ligase C1 | |||
| > rhop:D8W71_05160(?) | 350 | 70.9 | 1688 | 0 | -- | - | |||
| > rant:RHODO2019_00665(?) | 348 | 68.1 | 1642 | 0 | -- | - | |||
| > mphl:MPHLCCUG_00304(359) | 347 | 66.3 | 1593 | 4 | -> | Putative DNA ligase-like protein | |||
| > mrf:MJO55_25295(346) | 345 | 67.2 | 1585 | 4 | -> | ATP-dependent DNA ligase | |||
| > mdf:K0O62_26990(348) | 350 | 66.3 | 1584 | 5 | -> | ATP-dependent DNA ligase | |||
| > asd:AS9A_4177(352) | 353 | 65.7 | 1579 | 4 | -- | DNA ligase | |||
| > mdu:MDUV_47040(352) | 344 | 66.9 | 1579 | 3 | -> | ligC; DNA ligase C1 | |||
| > mpsc:MPSYJ_13880(343) | 345 | 66.7 | 1579 | 4 | -> | ligC_2; DNA ligase C1 | |||
| > mhib:MHIB_37570(344) | 346 | 66.5 | 1575 | 2 | -> | ligC; DNA ligase C1 | |||
| > mnm:MNVM_21770(357) | 345 | 67.5 | 1571 | 2 | -> | ligC; DNA ligase C1 | |||
| > mpof:MPOR_01590(342) | 345 | 66.7 | 1571 | 4 | -> | ligC_1; DNA ligase C1 | |||
| > mgro:FZ046_04040(348) | 351 | 65.2 | 1568 | 5 | -> | ATP-dependent DNA ligase | |||
| > mjd:JDM601_4023(350) | 345 | 67.2 | 1566 | 2 | -> | ligC; ATP-dependent DNA ligase LigC | |||
| > mne:D174_25765(350) | 348 | 65.2 | 1566 | 3 | -> | ATP-dependent DNA ligase | |||
| > mva:Mvan_5543(359) | 353 | 66.3 | 1566 | 4 | -> | ATP dependent DNA ligase | |||
| > myn:MyAD_25305(350) | 348 | 65.2 | 1566 | 3 | -> | ATP-dependent DNA ligase | |||
| > mter:4434518_03969(347) | 345 | 66.4 | 1564 | 1 | -> | ligC; ATP-dependent DNA ligase LigC | |||
| > mbok:MBOE_07990(352) | 354 | 65.3 | 1563 | 3 | -> | ligC; DNA ligase C1 | |||
| > mhas:MHAS_03950(348) | 347 | 64.0 | 1559 | 3 | -> | ligC_1; DNA ligase C1 | |||
| > msb:LJ00_31155(351) | 350 | 66.0 | 1559 | 4 | -> | ATP-dependent DNA ligase | |||
| > msg:MSMEI_6137(348) | 350 | 66.0 | 1559 | 4 | -> | hypothetical protein | |||
| > msh:LI98_31165(351) | 350 | 66.0 | 1559 | 4 | -> | ATP-dependent DNA ligase | |||
| > msm:MSMEG_6302(348) | 350 | 66.0 | 1559 | 4 | -> | DNA ligase | |||
| > msn:LI99_31160(351) | 350 | 66.0 | 1559 | 4 | -> | ATP-dependent DNA ligase | |||
| > mauu:NCTC10437_05284(351) | 350 | 65.4 | 1557 | 3 | -> | ligC_1; ATP-dependent DNA ligase | |||
| > mmin:MMIN_14730(347) | 345 | 66.1 | 1557 | 2 | -> | ligC; DNA ligase C1 | |||
| > mgi:Mflv_1273(351) | 350 | 64.9 | 1553 | 3 | -> | ATP dependent DNA ligase | |||
| > msp:Mspyr1_49100(351) | 350 | 64.9 | 1553 | 4 | -> | ATP-dependent DNA ligase | |||
| > marz:MARA_45450(361) | 353 | 64.3 | 1551 | 4 | -> | ligC; DNA ligase C1 | |||
| > mmat:MMAGJ_30400(351) | 350 | 64.9 | 1551 | 3 | -> | ligC; DNA ligase C1 | |||
| > mgau:MGALJ_40630(351) | 350 | 64.9 | 1550 | 6 | -> | ligC_1; DNA ligase C1 | |||
| > mher:K3U94_22020(344) | 345 | 66.1 | 1550 | 2 | -> | ATP-dependent DNA ligase | |||
| > mkm:Mkms_5005(353) | 349 | 66.2 | 1549 | 6 | -> | ATP dependent DNA ligase | |||
| > mmc:Mmcs_4916(353) | 349 | 66.2 | 1549 | 4 | -> | ATP dependent DNA ligase | |||
| > mmon:EWR22_26555(350) | 349 | 66.2 | 1549 | 3 | -> | ATP-dependent DNA ligase | |||
| > mvm:MJO54_21950(347) | 345 | 66.4 | 1548 | 3 | -> | ATP-dependent DNA ligase | |||
| > mxe:MYXE_03180(346) | 345 | 65.5 | 1546 | 4 | -> | ligC_2; DNA ligase C1 | |||
| > madi:A7U43_05205(?) | 349 | 66.5 | 1545 | 0 | -- | - | |||
| > mft:XA26_56840(349) | 350 | 64.9 | 1544 | 5 | -> | LigC-like protein | |||
| > myv:G155_28125(352) | 354 | 64.1 | 1544 | 4 | -> | ATP-dependent DNA ligase | |||
| > malv:MALV_39490(352) | 354 | 64.4 | 1540 | 3 | -> | ligC; DNA ligase C1 | |||
| > msei:MSEDJ_05280(350) | 351 | 64.4 | 1539 | 4 | -> | ligC_1; DNA ligase C1 | |||
| > mhol:K3U96_02035(350) | 350 | 64.6 | 1537 | 3 | -> | ATP-dependent DNA ligase | |||
| > mthn:4412656_04337(351) | 350 | 64.6 | 1535 | 2 | -> | ligC; ATP-dependent DNA ligase | |||
| > mcee:MCEL_35150(346) | 350 | 64.6 | 1533 | 4 | -> | ligC_2; DNA ligase C1 | |||
| > mty:MTOK_19460(347) | 350 | 64.9 | 1531 | 4 | -> | ligC_2; DNA ligase C1 | |||
| > mmor:MMOR_08760(350) | 350 | 64.0 | 1529 | 3 | -> | ligC_2; DNA ligase C1 | |||
| > mvq:MYVA_5422(360) | 359 | 64.3 | 1528 | 4 | -> | ligC1; ATP-dependent DNA ligase | |||
| > mfg:K6L26_03655(352) | 352 | 63.9 | 1527 | 2 | -> | ATP-dependent DNA ligase | |||
| > mflv:NCTC10271_00291(350) | 350 | 64.3 | 1526 | 4 | -> | ligC; ATP-dependent DNA ligase | |||
| > msen:K3U95_27050(352) | 352 | 63.6 | 1524 | 3 | -> | ATP-dependent DNA ligase | |||
| > mhek:JMUB5695_00282(346) | 345 | 64.1 | 1523 | 5 | -> | ligC_2; DNA ligase C1 | |||
| > mgo:AFA91_03775(360) | 359 | 63.8 | 1519 | 2 | -> | ATP-dependent DNA ligase | |||
| > mcht:MCHIJ_17500(349) | 350 | 64.0 | 1515 | 3 | -> | ligC; DNA ligase C1 | |||
| > whr:OG579_13960(?) | 345 | 62.9 | 1515 | 0 | -- | - | |||
| > gmg:NWF22_11475(351) | 352 | 64.5 | 1510 | 5 | -> | ATP-dependent DNA ligase | |||
| > mmuc:C1S78_027105(350) | 349 | 64.5 | 1503 | 2 | -> | ATP-dependent DNA ligase | |||
| > msa:Mycsm_06081(362) | 355 | 62.5 | 1499 | 6 | -> | ATP-dependent DNA ligase | |||
| > mdx:BTO20_02905(373) | 362 | 62.2 | 1498 | 3 | -> | ATP-dependent DNA ligase | |||
| > gta:BCM27_02260(350) | 350 | 62.9 | 1492 | 3 | -> | ATP-dependent DNA ligase | |||
| > gpo:GPOL_c47210(356) | 349 | 62.8 | 1487 | 4 | -> | ATP-dependent DNA ligase | |||
| > ghn:MVF96_02250(350) | 350 | 62.6 | 1485 | 3 | -> | ATP-dependent DNA ligase | |||
| > goi:LK459_07205(353) | 351 | 63.0 | 1483 | 2 | -> | ATP-dependent DNA ligase | |||
| > mij:MINS_03460(352) | 349 | 61.3 | 1481 | 4 | -> | ligC; DNA ligase C1 | |||
| > gam:GII34_21435(349) | 349 | 61.3 | 1480 | 2 | -> | ATP-dependent DNA ligase | |||
| > kra:Krad_0653(353) | 348 | 63.2 | 1480 | 3 | -> | ATP dependent DNA ligase | |||
| > gor:KTR9_0350(353) | 350 | 62.3 | 1478 | 3 | -> | ATP-dependent DNA ligase | |||
| > gji:H1R19_01860(350) | 350 | 61.4 | 1471 | 3 | -> | ATP-dependent DNA ligase | |||
| > mcb:Mycch_4876(369) | 368 | 61.1 | 1471 | 3 | -> | ATP-dependent DNA ligase | |||
| > gami:IHQ52_02655(350) | 350 | 62.3 | 1470 | 3 | -> | ATP-dependent DNA ligase | |||
| > goc:CXX93_04190(350) | 348 | 61.8 | 1470 | 2 | -> | ATP-dependent DNA ligase | |||
| > gsi:P5P27_18080(350) | 348 | 61.8 | 1470 | 3 | -> | ATP-dependent DNA ligase | |||
| > gom:D7316_03313(346) | 347 | 63.7 | 1469 | 4 | -> | ligC; DNA ligase C1 | |||
| > mdr:MDOR_34420(336) | 338 | 64.5 | 1469 | 3 | -> | ligC; DNA ligase C1 | |||