GFIT result for T00153

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

rpa:RPA3650
(914 a.a.)
 
--
 
K01971  ligD  [tr:Q6N3P3_RHOPA] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rpt:Rpal_4171(914)91496.95952(5297)14<> K01971  ligD  [tr:B3QGJ0_RHOPT] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)91389.05546(5312)14<> K01971  ligD  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpd:RPD_3490(930)92779.44980(4325)11<> K01971  ligD  [tr:Q133M6_RHOPS] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpb:RPB_1876(914)92178.34875(4690)12-> K01971  ligD  [tr:Q2IYX6_RHOP2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpc:RPC_3685(911)91874.54648(4423)7<> K01971  ligD  [tr:Q210G6_RHOPB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpe:RPE_3724(907)91474.24552(4364)4<> K01971  ligD  [tr:Q07K81_RHOP5] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:bll6773(892)91470.54292(3528)11<> K01971  ligD  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_12895(888)91170.14260(3524)7-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_26450(888)91170.14260(3524)10<> K01971  ligD  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brs:S23_15390(889)91269.54248(3984)3<> K01971  ligD  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bra:BRADO5823(904)91369.74243(3964)3<> K01971  ligD  [tr:A4Z011_BRASO] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)91769.14222(3920)4<- K01971  ligD  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_6329(895)91369.84218(3659)6<- K01971  ligD  [tr:A5EQ03_BRASB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)91465.93972(3764)1-- K01971  ligD  [tr:B6JFK1_OLICO] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)91465.93972(3764)1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)91465.93972(3764)1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nwi:Nwi_0353(913)92164.03956(3732)3-- K01971  ligD  [tr:Q3SVS1_NITWN] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)92464.53878(3164)4-- K01971  ligD  [tr:B8EKE2_METSB] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)91764.13838(3067)6-- K01971  ligD putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)91862.93834(3073)7-- K01971  ligD  [tr:B6A397_RHILW] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)91563.23830(3099)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)91663.53818(1626)6-- K01971  ligD  [tr:Q7D410_AGRT5] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)91863.33803(1457)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nha:Nham_0448(866)87664.73803(133)4-- K01971  ligD  [tr:Q1QR09_NITHX] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)91962.73800(3124)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)91762.73795(31)6-- K01971  ligD  [tr:C6B636_RHILS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)91662.73791(3029)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)92062.43775(1458)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)92062.53771(3013)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)92062.63770(3015)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)91762.63754(3039)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)92361.33740(1418)15-- K01971  ligD  [tr:F7XBX2_SINMM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)91362.73736(2271)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)92361.63735(2161)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)92061.73734(1412)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)93761.23732(3452)4-- K01971  ligD  [tr:B0T3L2_CAUSK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)92361.53729(2155)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)92061.53721(1399)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)92361.23710(1487)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)91661.83701(3480)5-- K01971  ligD  [tr:A7INJ2_XANP2] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)91862.03687(3424)5-- K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)91661.73686(1458)13-- K01971  ligD  [tr:Q98P39_RHILO] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)92360.73666(2879)7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pzu:PHZ_c3259(887)91660.93602(2595)18-- K01971  ligD  [tr:B4RAS0_PHEZH] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_pLPU83d1032(879)92059.53555(1242)13-- K01971  ligD  [tr:W6RMR2_9RHIZ] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsb:Bresu_0521(859)91948.62792(2503)7-- K01971  ligD  [tr:D9QKL0_BRESC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)94844.12430(2201)10-> K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)91945.22413(2165)8-> K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)91145.72388(2275)7-> K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c16580(850)91244.52367(63)8-> K01971  ligD  [tr:I3X2Z1_RHIFR] ykoU2; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)91344.52365(1684)3-> K01971  ligD  [tr:Q11J79_CHESB] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI_0169(856)91145.42364(2246)4-> K01971  ligD  [tr:A9H268_GLUDA] DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)91545.82361(2123)6-> K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_b04710(850)91344.52344(113)7-> K01971  ligD  [tr:Q6W1H3_RHISN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)91143.42341(1593)3-> K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)91442.92334(1612)3-> K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)90144.72322(84)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)90144.72322(84)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)90144.72322(437)7-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)90543.42317(2094)1-> K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)90144.62314(429)5-- K01971  ligD DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)90844.82293(507)4-> K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)91944.72278(475)9-> K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)90943.92270(1535)2-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)90943.92270(2036)1-> K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)91944.52267(493)6-> K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)90243.52265(410)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msc:BN69_1443(852)91042.32259(2148)5-> K01971  ligD  [tr:J7Q463_METSZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)90542.22236(316)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpy:Bphyt_1858(940)95440.72224(1987)3-> K01971  ligD  [tr:B2T3V5_BURPP] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgp:BGL_1c11440(971)97740.92218(1961)86-> K01971  ligD  [tr:A0A0B6S0A2_BURGL] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bfn:OI25_3429(921)94740.82211(838)3-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpf:Rpic12D_0488(867)92440.92205(2092)0-> K01971  ligD  [tr:C6BCT3_RALP1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)92541.42198(1986)1-> K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> byi:BYI23_A015080(904)94041.42195(774)2-> K01971  ligD  [tr:G8M3M4_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buo:BRPE64_ACDS15530(909)93640.42191(1954)2-> K01971  ligD  [tr:R4WYK7_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bue:BRPE67_ACDS15580(907)94341.02190(818)3-> K01971  ligD  [tr:A0A060P483_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bph:Bphy_0981(954)97240.12175(774)8-> K01971  ligD  [tr:B2JG88_BURP8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)92341.02171(2057)2-> K01971  ligD  [tr:B2UGG9_RALPJ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gma:AciX8_1368(920)92640.82167(1965)2-> K01971  ligD  [tr:G8NZZ5_GRAMM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcew:DM40_5175(957)97740.82164(2034)16-> K01971  ligD  [tr:A0A088ULI3_9BURK] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)91042.92162(1933)6-> K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)91341.92158(1545)3-> K01971  ligD  [tr:A0A068STE9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvi:Bcep1808_5735(993)100839.82156(782)28-> K01971  ligD  [tr:A4JQW9_BURVG] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:RALTA_B2120(916)91442.72154(355)19-- K01971  ligD  [tr:B3RCS2_CUPTR] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)92241.82154(2035)5-> K01971  ligD ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bge:BC1002_1425(937)96540.22153(1894)3-> K01971  ligD  [tr:D5W7V6_BURSC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmj:BMULJ_06021(927)96741.42150(2020)13-> K01971  ligD  [tr:A9ATU7_BURM1] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmu:Bmul_5476(927)96741.42150(1349)14-> K01971  ligD  [tr:A9ATU7_BURM1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)91341.92147(1976)1-> K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)91941.22147(1997)21-> K01971  ligD  [tr:D8NP23_RALSL] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxb:DR64_32(1001)100938.72146(1917)11-> K01971  ligD  [tr:Q13Z47_BURXL] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxe:Bxe_A2328(1001)100938.72146(1917)12-> K01971  ligD  [tr:Q13Z47_BURXL] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmk:DM80_5695(927)96741.32139(2016)11-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bve:AK36_5227(995)101039.52138(2007)43-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmul:NP80_5544(926)96141.02131(2007)13-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)91841.92128(2017)0-> K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aca:ACP_3506(863)92542.12127(1916)0-> K01971  ligD  [tr:C1F736_ACIC5] DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buk:MYA_5305(997)101239.52126(1995)25-> K01971  ligD  [tr:I2DYC4_9BURK] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bced:DM42_7098(948)96940.82123(1995)8-> K01971  ligD  [tr:A0A088V2D2_BURCE] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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