GFIT result for T00336

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

rpc:RPC_3685
(920 a.a.)
 
--
 
K01971  ligD  [tr:Q210G6_RHOPB] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rpe:RPE_3724(907)91178.94837(4698)4<> K01971  ligD  [tr:Q07K81_RHOP5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpd:RPD_3490(930)92475.64726(4081)11<> K01971  ligD  [tr:Q133M6_RHOPS] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpb:RPB_1876(914)91675.94682(4508)12<> K01971  ligD  [tr:Q2IYX6_RHOP2] ATP dependent DNA ligase, central; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpa:RPA3650(914)91574.64644(4446)9<> K01971  ligD  [tr:Q6N3P3_RHOPA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpt:Rpal_4171(914)91574.94634(3989)14<> K01971  ligD  [tr:B3QGJ0_RHOPT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)91274.34585(4376)14<> K01971  ligD  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:bll6773(892)90675.44584(3860)11<> K01971  ligD  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_09220(895)90673.84522(3444)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_12895(888)90674.54515(3816)7-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_26450(888)90674.54515(3816)10<> K01971  ligD  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brs:S23_15390(889)90674.54509(4174)3<> K01971  ligD  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bra:BRADO5823(904)91371.44344(4024)3<> K01971  ligD  [tr:A4Z011_BRASO] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aol:S58_17960(909)91470.74299(3951)4<- K01971  ligD  [tr:M4Z390_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_6329(895)90970.84252(3665)6<- K01971  ligD  [tr:A5EQ03_BRASB] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)91167.24112(3913)1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)91167.24112(3913)1-- K01971  ligD  [tr:B6JFK1_OLICO] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)91167.24112(3913)1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)91067.14063(3389)4-- K01971  ligD  [tr:B8EKE2_METSB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nwi:Nwi_0353(913)91066.64042(3865)3-- K01971  ligD  [tr:Q3SVS1_NITWN] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)91066.54017(3283)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)90767.14013(3267)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)91066.24010(3266)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)91066.64006(1903)6-- K01971  ligD  [tr:Q7D410_AGRFC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)91266.44005(1765)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5638(882)91066.84004(38)6-- K01971  ligD  [tr:C6B958_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)90866.14003(3274)7-- K01971  ligD  [tr:B6A397_RHILW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)91366.34001(1706)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)91066.24000(3256)6-- K01971  ligD  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)91066.53996(3267)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_04490(883)91266.13990(1724)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)91366.23977(1677)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)91165.93975(2414)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)91165.83969(2407)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)91365.93967(1667)15-- K01971  ligD  [tr:F7XBX2_SINMM] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)91365.93964(1664)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)91165.53961(1754)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] putative ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)90765.93960(3323)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_24315(891)90965.83957(1695)0-- K01971  ligD  [tr:A0A126P1J3_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)91366.23947(1673)13-- K01971  ligD  [tr:Q98P39_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_31130(878)90765.63940(1622)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)91165.53933(3712)5-- K01971  ligD  [tr:A7INJ2_XANP2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)91165.03918(3112)7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nha:Nham_0448(866)87066.93905(24)4-- K01971  ligD  [tr:Q1QR09_NITHX] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)90765.03901(2315)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)91364.13877(3164)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_pLPU83d1032(879)91363.53806(1514)13-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)93261.73758(3510)4-- K01971  ligD  [tr:B0T3L2_CAUSK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)90662.73722(3479)5-- K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pzu:PHZ_c3259(887)91461.93681(2534)18-- K01971  ligD  [tr:B4RAS0_PHEZH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsb:Bresu_0521(859)91150.62881(2625)7-- K01971  ligD  [tr:D9QKL0_BRESC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brd:JL11_05515(851)91949.72820(2564)0-> K01971  ligD  [tr:A0A0P0CNQ1_9CAUL] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)92643.72397(2122)3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)96344.32394(2182)10-> K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)91744.62358(577)9-> K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)90845.22352(2231)7-> K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)91944.32343(2142)8-> K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)89844.12342(2119)1-> K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)91544.22339(1599)3-> K01971  ligD  [tr:Q11J79_CHESB] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI0169(856)90745.12337(2216)4-> K01971  ligD  [tr:A9H268_GLUDA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)90843.62335(1576)3-> K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)87044.32326(1)7-- K01971  ligD  [tr:C3MIG9_RHISN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c16580(850)91044.62318(40)8-> K01971  ligD  [tr:I3X2Z1_RHIFR] ykoU2; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)87044.02314(477)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)87244.42300(28)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)87244.42300(28)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)87244.42300(481)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)91044.42297(508)4-> K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)91945.32295(2036)6-> K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)87244.32292(476)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)91243.92289(503)6-> K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)91443.12267(1668)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)89642.92257(442)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpy:Bphyt_1858(940)95040.82253(1995)3-> K01971  ligD  [tr:B2T3V5_PARPJ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)90942.52244(2038)1-> K01971  ligD  [tr:A0A0D5AP76_9RALS] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)90542.72233(1581)3-> K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msc:BN69_1443(852)91442.92217(2022)5-> K01971  ligD  [tr:J7Q463_METSZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpf:Rpic12D_0488(867)92041.22206(2044)0-> K01971  ligD  [tr:C6BCT3_RALP1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)92341.72201(2048)5-> K01971  ligD  [tr:D8NY76_RALSL] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)91941.12189(2028)2-> K01971  ligD  [tr:B2UGG9_RALPJ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgp:BGL_1c11440(971)97940.22180(1929)86-> K01971  ligD  [tr:A0A0B6S0A2_BURGL] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcai:K788_0007984(961)97040.82177(982)0-> K01971  ligD  [tr:A0A0P0R9T9_9BURK] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buo:BRPE64_ACDS15530(909)92741.72176(1955)2-> K01971  ligD  [tr:R4WYK7_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)92341.02176(2002)15-> K01971  ligD  [tr:D8NP23_RALSL] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpla:bpln_1g10960(932)95340.62175(1924)0-> K01971  ligD  [tr:A0A0P0KE94_9BURK] DNA primase small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmul:NP80_5544(926)95141.42174(2022)13-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buq:AC233_07635(932)96740.52169(1921)0-> K01971  ligD  [tr:A0A0M4P0Q5_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)91241.92162(2020)0-> K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmj:BMULJ_06021(927)95541.02161(2009)8-> K01971  ligD  [tr:A0A0H3KR24_BURM1] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmu:Bmul_5476(927)95541.02161(1404)14-> K01971  ligD  [tr:A0A0H3KR24_BURM1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bfn:OI25_3429(921)93540.42160(731)3-> K01971  ligD  [tr:A0A0D5V749_9BURK] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bue:BRPE67_ACDS15580(907)94241.02156(680)3-> K01971  ligD  [tr:A0A060P483_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> byi:BYI23_A015080(904)93940.92155(691)2-> K01971  ligD  [tr:G8M3M4_9BURK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)92141.32154(1990)0-> K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)91243.42154(1919)6-> K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmk:DM80_5695(927)95540.92150(1998)11-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gma:AciX8_1368(920)88242.42149(1932)2-> K01971  ligD  [tr:G8NZZ5_GRAMM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxb:DR64_32(1001)100739.02141(1897)11-> K01971  ligD  [tr:Q13Z47_BURXL] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bxe:Bxe_A2328(1001)100739.02141(1897)12-> K01971  ligD  [tr:Q13Z47_BURXL] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)90641.82141(1451)2-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)90641.82141(1935)1-> K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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