GFIT result for
rsh
|
GFIT result for
rsh
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rsh:Rsph17029_3403 (3634 a.a.) |
-- |
conserved repeat domain | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rsp:RSP_3667(3634) | 3634 | 98.3 | 22566 | 13 | <> | transcriptional regulator, AraC family with Parallel beta-helix repeat | |||
| > rsk:RSKD131_3898(3634) | 3634 | 97.8 | 22501 | 15 | -> | Conserved repeat domain precursor | |||
| > dnp:N8A98_02060(2684) | 2556 | 38.4 | 4846 | 0 | -- | hypothetical protein | |||
| > ceh:CEW89_15625(2402) | 2172 | 41.0 | 4774 | 7 | -> | hypothetical protein | |||
| > noj:EJ995_00100(5576) | 3590 | 34.2 | 4732 | 47 | -- | hypothetical protein | |||
| > fcu:NOX80_09490(3477) | 3346 | 33.9 | 4291 | 32 | -- | gliding motility-associated C-terminal domain-containing protein | |||
| > phyl:HB779_24265(3550) | 3590 | 32.7 | 4192 | 9 | -> | DUF11 domain-containing protein | |||
| > pscq:KHQ08_04370(2713) | 2526 | 34.8 | 4171 | 0 | -> | DUF11 domain-containing protein | |||
| > aqa:D1815_22680(5895) | 3707 | 31.5 | 4168 | 48 | -- | hypothetical protein | |||
| > alti:ALE3EI_1722(3986) | 2924 | 35.5 | 4124 | 17 | -- | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > arn:CGK93_01510(3511) | 3569 | 33.3 | 4090 | 22 | -- | hypothetical protein | |||
| > dod:DCS32_11820(2404) | 2522 | 36.5 | 3893 | 26 | -- | hypothetical protein | |||
| > spsc:E2P86_16760(3405) | 2563 | 36.7 | 3886 | 14 | -- | K20276 | bapA | DUF11 domain-containing protein; K20276 large repetitive protein | |
| > cat:CA2559_00005(8918) | 3047 | 33.8 | 3774 | 39 | -- | transcriptional regulator, AraC family with Parallel beta-helix repeat | |||
| > marx:INR76_08450(3530) | 2595 | 35.1 | 3754 | 13 | -- | DUF11 domain-containing protein | |||
| > pnv:JMY29_01275(2464) | 2514 | 36.5 | 3732 | 25 | -- | DUF11 domain-containing protein | |||
| > aue:C5O00_01365(4721) | 3420 | 32.0 | 3724 | 22 | -- | hypothetical protein | |||
| > maru:FIU81_02515(5844) | 3887 | 30.9 | 3722 | 16 | -> | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > nrh:T8J41_14510(?) | 2319 | 36.0 | 3682 | 0 | -- | - | |||
| > otm:OSB_12000(3928) | 3861 | 30.4 | 3665 | 10 | -> | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > est:DN752_06040(8201) | 3710 | 29.3 | 3657 | 21 | -- | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > rot:FIV09_19045(6120) | 3882 | 30.6 | 3648 | 23 | -> | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > fri:FraEuI1c_3163(8463) | 3429 | 32.8 | 3647 | 222 | -- | conserved repeat domain protein | |||
| > jan:Jann_3573(3486) | 3647 | 30.5 | 3641 | 6 | -> | K20276 | bapA | protein of unknown function DUF11; K20276 large repetitive protein | |
| > lmb:C9I47_0986(4562) | 3559 | 31.7 | 3610 | 26 | -> | conserved repeat domain protein | |||
| > fcm:BIW12_08030(2390) | 2254 | 37.6 | 3566 | 15 | -- | hypothetical protein | |||
| > cmb:CSW64_11365(3623) | 3710 | 30.8 | 3523 | 27 | -> | hypothetical protein | |||
| > nul:R1T42_00005(?) | 3733 | 30.5 | 3515 | 0 | -- | - | |||
| > wij:BWZ20_04875(5318) | 3563 | 30.1 | 3500 | 37 | -- | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > sual:KDD17_17940(6151) | 3885 | 30.2 | 3493 | 0 | -> | DUF11 domain-containing protein | |||
| > pex:IZT61_04200(5378) | 3550 | 29.5 | 3488 | 21 | -- | DUF11 domain-containing protein | |||
| > lsal:KBK07_16545(4642) | 4006 | 29.2 | 3456 | 14 | -> | DUF11 domain-containing protein | |||
| > aqb:D1818_08395(6083) | 3645 | 30.7 | 3417 | 48 | -- | K20276 | bapA | DUF11 domain-containing protein; K20276 large repetitive protein | |
| > asl:Aeqsu_2016(4288) | 3593 | 29.8 | 3417 | 17 | -- | K20276 | bapA | conserved repeat protein; K20276 large repetitive protein | |
| > ten:LPB136_07375(6279) | 3806 | 29.1 | 3391 | 19 | -- | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > psei:GCE65_15065(2300) | 2428 | 37.6 | 3382 | 66 | -- | DUF11 domain-containing protein | |||
| > mda:IPZ59_17500(4102) | 3396 | 31.8 | 3377 | 15 | -- | DUF11 domain-containing protein | |||
| > eke:EK0264_09570(7114) | 3703 | 30.3 | 3375 | 23 | -- | DUF11 domain-containing protein | |||
| > npm:QEO92_19945(2494) | 2761 | 33.7 | 3342 | 6 | -> | choice-of-anchor D domain-containing protein | |||
| > gaa:HX109_00065(6994) | 3857 | 27.8 | 3326 | 33 | -- | K20276 | bapA | DUF11 domain-containing protein; K20276 large repetitive protein | |
| > cmua:P8192_00800(3000) | 3094 | 31.5 | 3314 | 7 | -- | hypothetical protein | |||
| > aic:JK629_09450(3311) | 3045 | 31.3 | 3296 | 17 | -- | DUF11 domain-containing protein | |||
| > pzh:CX676_09075(3588) | 3814 | 28.6 | 3281 | 12 | -- | hypothetical protein | |||
| > mesp:C1M53_08935(3279) | 3679 | 29.8 | 3259 | 27 | -> | hypothetical protein | |||
| > bpsn:NIK97_15740(2156) | 2275 | 35.7 | 3252 | 4 | -> | hypothetical protein | |||
| > sala:ESZ53_08670(6061) | 3620 | 30.5 | 3220 | 39 | -- | DUF11 domain-containing protein | |||
| > kdi:Krodi_1757(5218) | 3664 | 29.5 | 3216 | 17 | -- | K20276 | bapA | conserved repeat domain protein; K20276 large repetitive protein | |
| > tbv:H9L17_05685(3114) | 3208 | 30.4 | 3205 | 17 | -> | DUF11 domain-containing protein | |||
| > dok:MED134_07389(1929) | 1836 | 39.7 | 3202 | 25 | -- | hypothetical protein | |||
| > macr:BHM04_10890(4144) | 3510 | 30.8 | 3182 | 11 | -- | hypothetical protein | |||
| > pmex:H4W19_12800(4434) | 3540 | 30.4 | 3146 | 16 | -> | DUF11 domain-containing protein | |||
| > sroi:IAG44_23370(2514) | 2482 | 34.3 | 3119 | 57 | -- | DUF11 domain-containing protein | |||
| > lavi:INQ42_10800(2901) | 2906 | 33.4 | 3083 | 11 | -> | DUF11 domain-containing protein | |||
| > bbd:Belba_3777(3807) | 3376 | 28.9 | 3033 | 2 | -- | protein of unknown function DUF11 | |||
| > mrn:K8F61_16510(2406) | 2397 | 34.7 | 3031 | 27 | -- | DUF11 domain-containing protein | |||
| > ddo:I597_1753(4123) | 3512 | 30.4 | 3023 | 28 | -- | K20276 | bapA | bca; C protein alpha-antigen precursor; K20276 large repetitive protein | |
| > fcs:TRV642_3106(3258) | 2435 | 33.2 | 3023 | 22 | -- | conserved protein of unknown function precursor, putative adhesin | |||
| > win:WPG_2452(3972) | 3726 | 28.5 | 3010 | 32 | -- | K20276 | bapA | internalin, putative; K20276 large repetitive protein | |
| > mpao:IZR02_00165(2209) | 2378 | 34.6 | 3006 | 24 | -- | hypothetical protein | |||
| > psim:KR76_26455(2714) | 2918 | 31.5 | 3003 | 60 | -- | internalin, putative | |||
| > mip:AXH82_06905(2208) | 2379 | 34.5 | 2996 | 26 | -- | hypothetical protein | |||
| > evi:Echvi_3666(6228) | 3337 | 29.4 | 2990 | 11 | -- | conserved repeat protein | |||
| > sinh:LS482_01310(3051) | 2894 | 31.6 | 2957 | 18 | -- | DUF11 domain-containing protein | |||
| > laci:CW733_05560(5836) | 3593 | 28.8 | 2944 | 26 | -- | hypothetical protein | |||
| > echi:FKX85_15050(6229) | 3474 | 28.1 | 2930 | 16 | -- | DUF11 domain-containing protein | |||
| > tpac:PG913_10795(4512) | 3710 | 26.7 | 2926 | 20 | -- | gliding motility-associated C-terminal domain-containing protein | |||
| > agg:C1N71_01700(3861) | 3604 | 30.7 | 2919 | 54 | -- | hypothetical protein | |||
| > hom:OF852_10530(4735) | 3527 | 30.6 | 2914 | 44 | -- | hypothetical protein | |||
| > psuw:WQ53_07755(3925) | 3254 | 29.5 | 2897 | 15 | -> | hypothetical protein | |||
| > ari:UM93_11860(3350) | 2850 | 30.8 | 2877 | 7 | -- | hypothetical protein | |||
| > phe:Phep_0107(4896) | 3542 | 27.2 | 2875 | 19 | -- | conserved repeat domain protein | |||
| > npc:KUV85_11295(4660) | 3506 | 28.6 | 2844 | 14 | -- | hypothetical protein | |||
| > lya:RDV84_14285(?) | 2618 | 32.7 | 2841 | 0 | -- | - | |||
| > mik:FOE78_10195(2174) | 2313 | 32.9 | 2829 | 14 | -- | DUF11 domain-containing protein | |||
| > mgel:G5B37_05500(5097) | 3587 | 28.8 | 2824 | 47 | -- | K20276 | bapA | tandem-95 repeat protein; K20276 large repetitive protein | |
| > mliq:NMQ05_17610(2002) | 1889 | 38.6 | 2801 | 33 | -- | GEVED domain-containing protein | |||
| > ffa:FFWV33_03320(5452) | 3326 | 29.3 | 2776 | 17 | -- | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > phw:G7075_18295(2179) | 2451 | 34.6 | 2747 | 60 | -- | K20276 | bapA | DUF11 domain-containing protein; K20276 large repetitive protein | |
| > blut:EW640_00170(2678) | 2826 | 31.3 | 2734 | 9 | -- | K20276 | bapA | DUF11 domain-containing protein; K20276 large repetitive protein | |
| > micg:GJV80_14480(2318) | 2487 | 32.0 | 2697 | 42 | -- | hypothetical protein | |||
| > nmy:CJ229_004905(?) | 3427 | 27.2 | 2672 | 0 | -- | - | |||
| > mseb:RE474_02050(?) | 2057 | 36.1 | 2653 | 0 | -- | - | |||
| > lez:GLE_3727(3042) | 2391 | 33.5 | 2637 | 27 | -> | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > emai:KZP23_04490(4025) | 3415 | 28.0 | 2579 | 13 | -- | DUF11 domain-containing protein | |||
| > dit:C3V38_07395(2385) | 2512 | 32.0 | 2528 | 68 | -- | hypothetical protein | |||
| > actl:L3i22_047450(2758) | 2850 | 29.7 | 2493 | 330 | -- | hypothetical protein | |||
| > lgu:LG3211_3702(3326) | 2642 | 31.3 | 2481 | 31 | -- | conserved repeat domain protein | |||
| > aym:YM304_12760(5213) | 3773 | 26.3 | 2480 | 122 | -- | hypothetical protein | |||
| > acts:ACWT_3388(2809) | 2826 | 29.0 | 2474 | 261 | -- | Mucin-4 | |||
| > ase:ACPL_3516(2809) | 2826 | 29.0 | 2474 | 261 | -- | muc4; Mucin-4 | |||
| > teh:GKE56_14950(2315) | 2405 | 31.3 | 2470 | 26 | -- | DUF11 domain-containing protein | |||
| > asic:Q0Z83_014840(?) | 2823 | 28.4 | 2465 | 0 | -- | - | |||
| > fag:K5I29_03125(?) | 2251 | 31.3 | 2454 | 0 | -- | - | |||
| > alm:AO498_01870(4663) | 3637 | 27.8 | 2402 | 14 | -- | K20276 | bapA | hypothetical protein; K20276 large repetitive protein | |
| > shua:PQ477_07400(2841) | 2199 | 32.2 | 2384 | 0 | -- | collagen binding domain-containing protein | |||
| > lem:LEN_1407(3661) | 3640 | 26.0 | 2356 | 36 | -> | K20276 | bapA | conserved hypothetical protein; K20276 large repetitive protein | |
| > algo:GYM62_16260(?) | 1717 | 35.4 | 2349 | 0 | -- | - | |||
| > noq:LN652_02560(3714) | 3542 | 27.7 | 2344 | 60 | -- | DUF11 domain-containing protein | |||
| > als:DJ013_19520(3095) | 3376 | 28.9 | 2306 | 48 | -- | hypothetical protein | |||
| > faz:M0M57_11630(3785) | 3309 | 27.5 | 2287 | 47 | -- | gliding motility-associated C-terminal domain-containing protein | |||