GFIT result for T00284

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

rsp:RSP_2679
(868 a.a.)
 
--
 
K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rsh:Rsph17029_1337(868)86898.25783(5531)6<> K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)87096.95705(5449)10<> K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsq:Rsph17025_1218(846)86274.04226(3988)5<> K01971  ligD  [tr:A4WRV5_RHOS5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoe:IMCC20628_02615(834)87252.32911(2622)3-- K01971  ligD  [tr:A0A0F7PJ82_9RHIZ] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)86451.02824(919)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)89049.42815(913)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)89049.42815(911)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)89049.42815(851)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)89049.42815(849)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)89049.42815(908)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_chr2907(865)89049.42815(844)14-- K01971  ligD  [tr:F7X888_SINMM] probabable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4Chr2868(865)89049.22808(816)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)89049.32805(901)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)86449.32776(633)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)86449.42758(841)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> malg:MALG_00291(814)86451.62750(2509)2-- K01971  ligD  [tr:A0A0H4KR85_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)86249.82750(644)7-- K01971  ligD  [tr:C3MIG9_SINFN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ghi:107941224(850)87350.62733(2483)0--     [tr:A0A1U8MTV7_GOSHI] multifunctional non-homologous end joining protein LigD-like
> deq:XM25_14700(857)85650.52731(899)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> esj:SJ05684_c27600(864)88449.42722(746)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mey:TM49_01330(829)87449.72719(2585)0-- K01971  ligD  [tr:A0A0D5LKF2_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmed:Mame_02200(830)88549.22706(2598)0-- K01971  ligD  [tr:A0A1U9Z1F8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cdq:BOQ54_10250(846)88850.22680(2463)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chel:AL346_19410(846)88849.82667(2442)4-- K01971  ligD  [tr:A0A0K2DH57_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> maad:AZF01_01330(821)86648.42642(2522)0-- K01971  ligD  [tr:A0A127CE96_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssy:SLG_04290(835)86949.42637(2314)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daa:AKL17_3157(812)86350.22628(2427)0-- K01971  ligD  [tr:A0A165SRM4_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> skr:BRX40_17275(838)86849.02579(2281)0-- K01971  ligD  [tr:A0A1L6JDL6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cij:WG74_06635(829)86448.42575(2304)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phl:KKY_1733(820)83947.72575(2300)1-- K01971  ligD  [tr:G4RCU3_PELHB] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)85648.82574(2311)6-- K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sch:Sphch_2999(835)87747.82567(2306)6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> syb:TZ53_20775(831)86647.82566(2313)3-- K01971  ligD  [tr:A0A0C5XXI0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)86648.02556(2281)3-- K01971  ligD  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sinb:SIDU_07840(829)86647.72555(2267)0-- K01971  ligD  [tr:A0A1L5BNB0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nre:BES08_17875(848)86348.62548(108)0-- K01971  ligD  [tr:A0A1D8A9J8_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pns:A9D12_07005(838)87048.92547(2278)0-- K01971  ligD  [tr:A0A192D4M7_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smaz:LH19_24710(838)87347.92547(791)0-- K01971  ligD  [tr:A0A0P0E3S7_SPHMC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smag:AN936_21285(838)87347.82537(2227)0-- K01971  ligD  [tr:A0A0N9UH36_SPHMC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ado:A6F68_01381(838)87547.72536(2246)0-- K01971  ligD  [tr:A0A1B2ACN1_9SPHN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> span:AWL63_03665(816)84749.02534(2291)0-- K01971  ligD  [tr:A0A1B3Z726_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)87448.42531(2220)1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splk:AV944_04690(816)84848.02529(2260)0-- K01971  ligD  [tr:A0A1P8PRV3_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphr:BSY17_3129(825)85548.72523(7)0-- K01971  ligD  [tr:A0A1B3MPN1_9SPHN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphi:TS85_18230(810)84349.32520(2219)3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cna:AB433_09865(843)86746.92519(2253)2-- K01971  ligD  [tr:A0A0G3XHX8_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amx:AM2010_2477(849)87748.12517(2217)1-- K01971  ligD  [tr:A0A0G3XBK9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ery:CP97_14928(839)87547.42516(44)0-- K01971  ligD  [tr:A0A160HUG2_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> suam:BOO69_18745(806)86247.32516(2302)0-- K01971  ligD  [tr:A0A1J0WMK0_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphk:SKP52_18625(835)87547.32514(44)3-- K01971  ligD  [tr:A0A0A7PKR9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ster:AOA14_14085(835)87047.52514(651)0-- K01971  ligD  [tr:A0A142W185_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)87449.12512(2210)4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snj:A7E77_04765(834)87548.12507(2225)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eli:ELI_04125(839)87247.42506(2216)2-- K01971  ligD  [tr:Q2NBM4_ERYLH] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphq:BWQ93_13790(834)86947.82506(737)0-- K01971  ligD  [tr:A0A1P8WZE4_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> efv:CHH26_13895(840)87547.32502(2221)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphb:EP837_02332(830)87148.12501(60)0-- K01971  ligD  [tr:A0A173L0C7_9SPHN] DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgi:SGRAN_4135(841)87148.02497(2235)0-- K01971  ligD  [tr:A0A109YNA4_9SPHN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blas:BSY18_2878(825)85548.32491(2230)0-- K01971  ligD  [tr:A0A1B3N8M4_9SPHN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssan:NX02_27130(831)87147.42491(50)6-- K01971  ligD  [tr:W0AKE6_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cid:P73_3679(812)82350.32489(2178)7-- K01971  ligD  [tr:A0A0B5DZF4_9RHOB] DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphp:LH20_17000(837)87247.22486(2197)0-- K01971  ligD  [tr:A0A0M4D143_SPHS1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splm:BXU08_12640(819)85648.42485(2147)0-- K01971  ligD  [tr:A0A1S6FL38_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> elq:Ga0102493_111761(830)86248.02483(2188)0-- K01971  ligD  [tr:A0A074MDK5_9SPHN] bifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sbd:ATN00_05035(834)87047.82483(2359)0-- K01971  ligD  [tr:A0A0S3EWK5_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spmi:K663_11060(830)86547.92483(2222)0-- K01971  ligD  [tr:A0A126R958_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)85346.42475(1626)1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spht:K426_07785(829)86047.12475(1384)0-- K01971  ligD  [tr:A0A126RKD5_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_3982(837)86547.62467(707)7-- K01971  ligD  [tr:A5VDG1_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)88744.92454(1850)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psin:CAK95_22200(899)87644.32452(2109)0-- K01971  ligD  [tr:A0A1W6ZVW3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)85747.62449(2183)1-- K01971  ligD  [tr:Q2G7N8_NOVAD] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cman:A9D14_07075(842)87546.22448(2144)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccel:CCDG5_0620(826)84244.32409
0-- K01971  ligD  [tr:A0A078KJE6_9FIRM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thw:BMG03_06005(802)85447.22405(2071)0-- K01971  ligD  [tr:A0A1S6ID59_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)85245.12372(2266)0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)83145.72365(476)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcon:B0A89_10545(824)87345.42350(2030)0-- K01971  ligD  [tr:A0A1W6CYQ8_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)89644.52345(2113)0-- K01971  ligD  [tr:A0A1W1I2Z9_9BACT] ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eyy:EGYY_19050(833)82245.72337
0-- K01971  ligD  [tr:F7UV10_EEGSY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbm:TEF_06740(852)87444.12318(2043)0-- K01971  ligD  [tr:A0A192IGW8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)82644.32313(2197)0-- K01971  ligD  [tr:C8WIH5_EGGLE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)86843.82308(421)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dor:Desor_2615(813)82344.62296
0-- K01971  ligD  [tr:G7W6F7_DESOD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_16940(898)87541.62295(17)0-- K01971  ligD  [tr:A0A142WYC5_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)85243.52283(2008)1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddh:Desde_0514(812)81743.92280(2176)0-- K01971  ligD  [tr:I4A4U0_DESDJ] ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dhd:Dhaf_0568(818)83943.62261
0-- K01971  ligD  [tr:B8FUY8_DESHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)85043.62261(2157)0-- K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dsy:DSY0616(818)83943.62257
0-- K01971  ligD  [tr:Q24ZY7_DESHY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbot:ATE48_11890(826)86643.92253(2065)0-- K01971  ligD  [tr:A0A1B1AJ26_9CAUL] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)88143.22253(2063)1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)88143.22253(2063)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmi:Desmer_2946(818)81843.52250(2149)0-- K01971  ligD  [tr:J7IT26_DESMD] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mln:A9174_03965(829)83244.52250(333)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgy:Sgly_0962(813)81744.12250
0-- K01971  ligD  [tr:F0T2I5_SYNGF] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)85544.42247(2041)2-- K01971  ligD  [tr:A0A0K2BE58_9BURK] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dai:Desaci_2451(813)82742.92243(2081)2-- K01971  ligD  [tr:I4D6H7_DESAJ] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)83144.22243(291)11-- K01971  ligD  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mesw:A9K65_004035(837)82943.82241(332)0-- K01971  ligD  [tr:A0A1W6X1F3_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...