GFIT result for
rto
|
GFIT result for
rto
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rto:RTO_22110 (71 a.a.) |
-- |
Helix-turn-helix. | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ccom:I6K69_07140(71) | 71 | 100.0 | 490 | 1 | <- | helix-turn-helix transcriptional regulator | |||
| > dfm:NQ560_03805(71) | 71 | 100.0 | 490 | 3 | <- | helix-turn-helix transcriptional regulator | |||
| > dlo:K5I24_06190(71) | 71 | 100.0 | 490 | 2 | <- | helix-turn-helix transcriptional regulator | |||
| > rgn:RGna_07910(71) | 71 | 88.7 | 444 | 2 | <- | XRE family transcriptional regulator | |||
| > bprs:CK3_23630(71) | 71 | 85.9 | 416 | 1 | <- | Helix-turn-helix. | |||
| > cbil:EUBC25_23660(?) | 71 | 84.5 | 412 | 0 | -- | - | |||
| > lcg:L3BBH23_03540(71) | 71 | 84.5 | 412 | 0 | <- | hypothetical protein | |||
| > lacy:A4V08_02310(71) | 71 | 83.1 | 409 | 3 | <- | transcriptional regulator | |||
| > erm:EYR00_09080(76) | 70 | 70.0 | 353 | 0 | -- | XRE family transcriptional regulator | |||
| > ahq:NMU03_01175(?) | 68 | 73.5 | 349 | 0 | -- | - | |||
| > casp:NQ535_06650(69) | 64 | 68.8 | 336 | 3 | -- | helix-turn-helix transcriptional regulator | |||
| > ehn:H9Q80_06880(78) | 68 | 64.7 | 315 | 0 | -- | helix-turn-helix transcriptional regulator | |||
| > bcoc:BLCOC_48670(?) | 67 | 62.7 | 313 | 0 | -- | - | |||
| > csh:Closa_0281(75) | 69 | 36.2 | 217 | 2 | -- | K07727 | K07727 | transcriptional regulator, XRE family; K07727 putative transcriptional regulator | |
| > hhj:NQ487_11235(90) | 68 | 38.2 | 217 | 1 | -- | helix-turn-helix transcriptional regulator | |||
| > cbol:CGC65_05840(73) | 67 | 38.8 | 211 | 0 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > ckl:CKL_2873(73) | 69 | 36.2 | 211 | 2 | -- | Hypothetical protein | |||
| > ckr:CKR_2554(73) | 69 | 36.2 | 211 | 2 | -- | hypothetical protein | |||
| > ecou:M1R54_04270(71) | 69 | 36.2 | 204 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > ctet:BN906_02638(71) | 69 | 36.2 | 203 | 0 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > fsa:C5Q98_07505(71) | 69 | 36.2 | 201 | 0 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > blar:LC508_04140(?) | 69 | 33.3 | 192 | 0 | -- | - | |||
| > rlr:NQ541_01075(66) | 60 | 36.7 | 189 | 0 | -- | helix-turn-helix transcriptional regulator | |||
| > fpr:FP2_24110(66) | 63 | 31.7 | 186 | 0 | -- | K07727 | K07727 | Predicted transcriptional regulator; K07727 putative transcriptional regulator | |
| > amur:ADH66_03995(?) | 67 | 32.8 | 185 | 0 | -- | - | |||
| > ruk:A4V00_04985(76) | 67 | 32.8 | 185 | 1 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > agat:RWV98_02620(?) | 70 | 30.0 | 184 | 0 | -- | - | |||
| > mfor:NQ534_02410(66) | 58 | 32.8 | 170 | 1 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > bpro:PMF13cell1_04541(75) | 70 | 28.6 | 163 | 1 | -- | K07727 | K07727 | hypothetical protein; K07727 putative transcriptional regulator | |
| > aob:I6H46_00935(74) | 58 | 36.2 | 151 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > avg:I6H45_07105(74) | 58 | 36.2 | 151 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > aia:AWH56_005150(73) | 66 | 30.3 | 148 | 3 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > caln:NIES2098_34330(109) | 66 | 30.3 | 147 | 0 | -- | K07727 | K07727 | transcriptional regulator; K07727 putative transcriptional regulator | |
| > toq:HCG51_05940(109) | 66 | 30.3 | 147 | 1 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > cyn:Cyan7425_4838(71) | 67 | 34.3 | 146 | 7 | -- | K07727 | K07727 | transcriptional regulator, XRE family; K07727 putative transcriptional regulator | |
| > int:RX717_15385(?) | 65 | 30.8 | 146 | 0 | -- | - | |||
| > mos:AXE82_11815(79) | 66 | 33.3 | 144 | 2 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > lxa:OW255_06550(68) | 63 | 30.2 | 132 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > cbe:Cbei_1341(311) | 59 | 32.2 | 129 | 2 | -- | putative transcriptional regulator, XRE family | |||
| > cbz:Cbs_1341(311) | 59 | 32.2 | 129 | 2 | -- | XRE family transcriptional regulator | |||
| > vsi:MTO69_06270(74) | 64 | 32.8 | 127 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > psop:KP014_20810(77) | 65 | 32.3 | 126 | 1 | -- | helix-turn-helix transcriptional regulator | |||
| > lha:LHA_0148(207) | 66 | 37.9 | 125 | 1 | -- | Peptidase S24-like domain protein | |||
| > hbq:QI031_23165(398) | 56 | 30.4 | 124 | 33 | -- | pentapeptide repeat-containing protein | |||
| > wpa:CO680_02175(68) | 64 | 35.9 | 122 | 3 | -- | XRE family transcriptional regulator | |||
| > acol:K5I23_12335(70) | 60 | 31.7 | 121 | 3 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > bsan:CHH28_16380(271) | 43 | 41.9 | 121 | 1 | -- | transcriptional regulator | |||
| > dao:Desac_1391(75) | 69 | 30.4 | 120 | 0 | -- | K07727 | K07727 | hypothetical protein; K07727 putative transcriptional regulator | |
| > rcc:RCA_04560(77) | 69 | 30.4 | 120 | 0 | -- | hypothetical protein | |||
| > rcm:A1E_04925(77) | 69 | 30.4 | 120 | 0 | -- | hypothetical protein | |||
| > abae:CL176_05565(57) | 49 | 30.6 | 119 | 0 | -- | transcriptional regulator | |||
| > opf:CBP31_06335(78) | 67 | 32.8 | 119 | 1 | -- | K07727 | K07727 | transcriptional regulator; K07727 putative transcriptional regulator | |
| > vg:55608898(71) | 57 | 33.3 | 119 | 17 | -- | HWB70_gp31; Paenibacillus phage Yyerffej; helix-turn-helix transcriptional regulator | |||
| > bya:BANAU_1768(71) | 67 | 31.3 | 118 | 1 | -- | yopB2; SPBc2 prophage-derived uncharacterized protein yopB | |||
| > glj:GKIL_0920(76) | 53 | 30.2 | 118 | 0 | -- | XRE family transcriptional regulator | |||
| > pgm:PGRAT_23905(75) | 59 | 30.5 | 118 | 1 | -- | hypothetical protein | |||
| > hro:HELRODRAFT_162485(512) | 57 | 36.8 | 117 | 6 | -- | hypothetical protein | |||
| > sedi:EBB79_13255(168) | 55 | 32.7 | 117 | 4 | -- | XRE family transcriptional regulator | |||
| > maqi:LDL77_05420(68) | 59 | 30.5 | 116 | 1 | -- | helix-turn-helix domain-containing protein | |||
| > mrs:Murru_0739(79) | 63 | 30.2 | 116 | 3 | -- | helix-turn-helix domain protein | |||
| > ppeo:ABE82_07540(70) | 60 | 33.3 | 116 | 2 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > hak:KO116_03855(87) | 69 | 33.3 | 115 | 1 | -- | hypothetical protein | |||
| > lly:J2N86_13800(209) | 66 | 34.8 | 115 | 0 | -- | LexA family transcriptional regulator | |||
| > noe:CLI64_29850(79) | 61 | 36.1 | 115 | 0 | -- | DNA-binding protein | |||
| > ppha:BVH74_15125(270) | 43 | 37.2 | 115 | 0 | -- | transcriptional regulator | |||
| > nfl:COO91_10987(87) | 59 | 30.5 | 114 | 1 | -- | K07727 | K07727 | DNA-binding transcriptional regulator, XRE family; K07727 putative transcriptional regulator | |
| > pui:PUW25_05970(124) | 59 | 33.9 | 114 | 1 | -- | helix-turn-helix domain-containing protein | |||
| > rus:RBI_I01471(115) | 58 | 34.5 | 114 | 0 | -- | hypothetical protein predicted by Glimmer/Critica | |||
| > aht:ANTHELSMS3_03502(274) | 59 | 32.2 | 113 | 0 | -- | helix-turn-helix domain protein | |||
| > cfon:HZU75_06600(79) | 70 | 34.3 | 113 | 1 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > htt:HZS52_01755(84) | 69 | 33.3 | 113 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > shn:Shewana3_2358(78) | 67 | 31.3 | 113 | 2 | -- | K07727 | K07727 | hypothetical protein; K07727 putative transcriptional regulator | |
| > szh:K0H63_10515(?) | 67 | 31.3 | 113 | 0 | -- | - | |||
| > msec:LN244_06185(275) | 43 | 34.9 | 112 | 0 | -- | helix-turn-helix domain-containing protein | |||
| > pmet:G4Y79_15395(93) | 65 | 30.8 | 112 | 2 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > ptan:CRYO30217_02015(64) | 59 | 33.9 | 112 | 2 | -- | hypothetical protein | |||
| > sacz:AOT14_05450(115) | 57 | 35.1 | 112 | 0 | -- | hypothetical protein | |||
| > hhao:QWG60_01190(?) | 43 | 32.6 | 111 | 0 | -- | - | |||
| > moi:MOVS_09145(71) | 66 | 30.3 | 111 | 1 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > ppm:PPSC2_05885(122) | 66 | 33.3 | 111 | 7 | -- | ansR1; XRE family transcriptional regulator | |||
| > ppo:PPM_1110(122) | 66 | 33.3 | 111 | 8 | -- | ansR1; HTH-type transcriptional regulator ansR Ans operon repressor protein | |||
| > ppoy:RE92_06000(122) | 66 | 33.3 | 111 | 1 | -- | XRE family transcriptional regulator | |||
| > ppq:PPSQR21_012000(122) | 66 | 33.3 | 111 | 3 | -- | XRE family transcriptional regulator | |||
| > crb:17875369(286) | 56 | 33.9 | 110 | 58 | -- | agamous-like MADS-box protein AGL82 | |||
| > lsg:lse_0677(314) | 51 | 31.4 | 110 | 0 | -- | DNA-binding domain | |||
| > mgeo:CFI10_07925(275) | 43 | 34.9 | 110 | 1 | -- | transcriptional regulator | |||
| > snan:I6N98_13085(69) | 67 | 34.3 | 110 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > fce:JN531_014460(76) | 55 | 30.9 | 108 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > flg:LV716_11415(69) | 62 | 30.6 | 108 | 2 | -- | helix-turn-helix domain-containing protein | |||
| > fpla:A4U99_04805(120) | 58 | 32.8 | 108 | 3 | -- | XRE family transcriptional regulator | |||
| > hpiz:GYM47_02370(80) | 69 | 31.9 | 108 | 0 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > lagr:FJQ98_19405(68) | 58 | 31.0 | 108 | 2 | -- | K07727 | K07727 | helix-turn-helix transcriptional regulator; K07727 putative transcriptional regulator | |
| > len:LEP3755_30440(73) | 64 | 31.2 | 108 | 0 | -- | hypothetical protein | |||
| > nsh:GXM_07097(65) | 47 | 31.9 | 108 | 0 | -- | putative transcriptional regulator | |||
| > alr:DS731_05730(66) | 54 | 33.3 | 107 | 1 | -- | K07727 | K07727 | XRE family transcriptional regulator; K07727 putative transcriptional regulator | |
| > lag:N175_07290(72) | 69 | 31.9 | 107 | 0 | -- | XRE family transcriptional regulator | |||
| > lcm:102358703(517) | 37 | 37.8 | 107 | 61 | -- | tigger transposable element-derived protein 4-like | |||
| > malu:KU6B_26310(288) | 59 | 32.2 | 107 | 1 | -- | hypothetical protein | |||
| > mlq:ASQ50_18480(85) | 69 | 30.4 | 107 | 3 | -- | transcriptional regulator | |||
| > ppso:QPJ95_21530(?) | 56 | 32.1 | 107 | 0 | -- | - | |||