GFIT result for T00085

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sco:SCO7355
(213 a.a.)
 
--
 
    [tr:Q9KYN0_STRCO] SC9H11.09c; hypothetical protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> slv:SLIV_02530(213)21399.51503(1397)6<>     [tr:A0A076LXV2_STRLI] hypothetical protein
> sho:SHJGH_1840(203)21174.91021(892)3--    hypothetical protein
> shy:SHJG_2075(203)21174.91021(892)3--     [tr:H2JSI5_STRHJ] hypothetical protein
> sci:B446_04035(203)20673.3995(879)1--     [tr:S5VGQ1_STRC3] hypothetical protein
> strc:AA958_32855(223)20868.3917(750)8--     [tr:A0A0F7ND98_9ACTN] 3'-phosphoesterase
> sals:SLNWT_5553(311)21665.3868(746)70-- K01971  ligD  [tr:A0A0B5EVW2_STRA4] DNA ligase D, 3'-phosphoesterase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salu:DC74_325(225)21065.2850(709)6--     [tr:A0A059VUX7_STRA9] hypothetical protein
> sall:SAZ_02075(212)20665.0836(721)3--    3'-phosphoesterase
> scz:ABE83_32310(195)18666.7801(661)0--     [tr:A0A0M5J5J7_9ACTN] 3'-phosphoesterase
> spri:SPRI_0779(206)20560.5773(617)0--     [tr:A0A0M4DB56_STRPR] 3'-phosphoesterase
> sgr:SGR_6488(187)17766.7758(605)1--     [tr:B1VLC6_STRGG] conserved hypothetical protein
> sfi:SFUL_645(217)20561.0755(644)1--     [tr:N0CKT2_9ACTN] DNA ligase D, 3'-phosphoesterase domain protein
> sgb:WQO_02620(187)17565.7750(646)0--     [tr:A0A0U3LV23_STRGL] 3'-phosphoesterase
> sct:SCAT_5571(199)20660.7739(618)2--     [tr:F8JRQ3_STREN] conserved protein of unknown function
> scy:SCATT_55710(199)20660.7739(618)3--     [tr:F8JRQ3_STREN] hypothetical protein
> sfa:Sfla_5714(184)17566.3736(581)1--     [tr:E8WEF8_STRFA] DNA ligase D, 3'-phosphoesterase domain protein
> strp:F750_0875(184)17566.3736(581)1--     [tr:M9TLW6_9ACTN] ligD; ATP-dependent DNA ligase clustered with Ku protein (EC:6.5.1.1)
> ssx:SACTE_0551(186)17763.3735(556)0--     [tr:G2NK67_STREK] DNA ligase D, 3'-phosphoesterase domain protein
> sld:T261_7408(213)20161.2734(567)4--     [tr:A0A0D4DYQ0_9ACTN] hypothetical protein
> mem:Memar_2179(197)21153.1658
0--     [tr:A3CXK2_METMJ] conserved hypothetical protein
> dao:Desac_0135(207)20750.2643
0--     [tr:F2NBV5_DESAR] DNA ligase D, 3'-phosphoesterase domain protein
> mbg:BN140_1383(187)19053.7628
0--     [tr:I7KCW4_METBM] lig5; DNA ligase (ATP) (EC:6.5.1.1)
> ank:AnaeK_0932(737)20551.2620(505)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0935(789)20550.7611(497)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)20848.6604(502)1-- K01971  ligD  [tr:Q2G7N8_NOVAD] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)20749.8599(494)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mhi:Mhar_1719(203)20750.2599
0--     [tr:G7WQT4_METH6] DNA ligase D, 3'-phosphoesterase domain protein
> syb:TZ53_20775(831)20449.0597(495)3-- K01971  ligD  [tr:A0A0C5XXI0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssy:SLG_04290(835)20548.8596(495)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smag:AN936_21285(838)21048.1591(486)0-- K01971  ligD  [tr:A0A0N9UH36_SPHMC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)20650.0588(486)3-- K01971  ligD  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphp:LH20_17000(837)21047.6586(481)0-- K01971  ligD  [tr:A0A0M4D143_SPHS1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpg:Theba_0073(200)21347.9585
0--     [tr:I2F1M1_9BACT] DNA ligase D-like 3'-phosphoesterase domain-containing protein
> aay:WYH_02746(840)21348.8584(482)1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphk:SKP52_18625(835)21047.6584(35)3-- K01971  ligD  [tr:A0A0A7PKR9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)20848.1583
0-- K01971  ligD  [tr:C8WIH5_EGGLE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sch:Sphch_2999(835)20548.8581(479)6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_1043(191)20349.8578
0--     [tr:A0A0F7GDJ9_9CHLR] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1)
> chel:AL346_19410(846)20550.2574()4-- K01971  ligD  [tr:A0A0K2DH57_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0884(726)19650.0572(443)346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_17065(904)20847.6571(36)5-- K01971  ligD  [tr:A0A0G3M4L8_9FLAO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14700(857)20345.8570(46)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_02590(830)20646.6569(42)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dti:Desti_0132(536)20646.1569(463)0--     [tr:I4BZY8_DESTA] DNA ligase D/DNA polymerase LigD
> nko:Niako_1577(934)20845.2569
5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_pLPU83d1032(879)21146.0569(48)13-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)20645.1568
3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)21644.9568
1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_09757(830)20645.1566(28)3-- K01971  ligD  [tr:F0LE72_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ery:CP97_13080(841)20545.9565(464)1-- K01971  ligD  [tr:A0A0H4VEJ1_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_3982(837)20846.2565(459)7-- K01971  ligD  [tr:A5VDG1_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_09695(786)20747.8564(452)28-- K01971  ligD  [tr:S4XS85_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)17350.3564()1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu4632(771)20446.6563(27)5-- K01971  ligD  [tr:A9CGX3_AGRFC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_4181(647)20148.8563(456)26-- K01971  ligD  [tr:A4FHC5_SACEN] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphi:TS85_18230(810)20448.0563(458)3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)20445.1562(460)1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amx:AM2010_2477(849)20946.9562(458)1-- K01971  ligD  [tr:A0A0G3XBK9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)21145.5562
4-- K01971  ligD  [tr:B8EKE2_METSB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sbd:ATN00_05035(834)20547.8561(459)0-- K01971  ligD  [tr:A0A0S3EWK5_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)21644.9560(16)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)20346.3558(14)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)17554.3558()3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)21744.7557(22)7-- K01971  ligD  [tr:C3MIG9_RHISN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cna:AB433_09865(843)20645.6555(452)2-- K01971  ligD  [tr:A0A0G3XHX8_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)20147.3555(36)6-- K01971  ligD  [tr:B3PPH4_RHIE6] probable ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)20547.3555
3-- K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll2077(833)17153.2554(23)12--     [tr:Q98J69_RHILO] probable ATP-dependent DNA ligase
> smk:Sinme_2798(865)21644.4554(55)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)20346.8553(448)6-- K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)20447.5552(445)4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssan:NX02_27130(831)20446.1551(2)6-- K01971  ligD  [tr:W0AKE6_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:bll6773(892)20444.6550(450)11-- K01971  ligD  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)20946.9550()1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eli:ELI_04125(839)21446.3549(447)2-- K01971  ligD  [tr:Q2NBM4_ERYLH] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12765(198)21146.0549
0--     [tr:A0A0S2TFJ6_9GAMM] DNA ligase
> phl:KKY_1733(820)20844.7547(442)1-- K01971  ligD  [tr:G4RCU3_PELHB] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)21143.1547(5)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcj:MCON_0453(170)17350.3546
0--     [tr:F4BWI7_METCG] conserved hypothetical protein
> rsh:Rsph17029_1337(868)20347.3546(441)6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)20347.3546(441)8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cij:WG74_06635(829)20945.5545(438)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_6329(895)20946.9544(441)6-- K01971  ligD  [tr:A5EQ03_BRASB] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)21444.9544(437)4-- K01971  ligD  [tr:B0T3L2_CAUSK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> malg:MALG_00291(814)20547.3544(433)2-- K01971  ligD  [tr:A0A0H4KR85_9RHOB] DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)21045.7544(2)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)20143.8544()1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)20143.8544()1-- K01971  ligD  [tr:B6JFK1_OLICO] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)20143.8544()1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> det:DET0850(183)17151.5543
0--     [tr:Q3Z872_DEHM1] conserved hypothetical protein
> dmy:X793_04130(183)17151.5543
0--    DNA ligase D
> rei:IE4771_PD00652(878)21143.6543(427)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)21143.6542(426)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)21143.1542
7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)20347.3542(437)10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)21744.2542(7)9-- K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)21744.2542(7)9-- K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)21744.2542(5)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)21744.2542(5)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)21744.2542(41)7-- K01971  ligD  [tr:A0A0E0UFQ3_SINMB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...