GFIT result for T01646

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sct:SCAT_5457
(313 a.a.)
 
--
 
    ligD; DNA polymerase LigD, ligase domain
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> scy:SCATT_54560(327)31399.72097(1726)4<>    DNA polymerase LigD ligase subunit
> sals:SLNWT_5554(334)30762.51274(898)5-- K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spun:BFF78_39610(336)30764.21266(750)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngv:CDO52_22145(317)31157.61175(839)0--    ATP-dependent DNA ligase
> amd:AMED_5204(314)31156.61167(672)6--    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)31156.61167(672)6--    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)31156.61167(672)6--    ATP-dependent DNA ligase
> amz:B737_5142(314)31156.61167(672)6--    lig; ATP-dependent DNA ligase
> pmad:BAY61_01235(306)30657.21167(430)0--    ATP-dependent DNA ligase
> mmal:CKJ54_13680(332)31357.21165(580)0--    ATP-dependent DNA ligase
> mchi:AN480_15575(332)31357.81163(582)0--    ATP-dependent DNA ligase
> mia:OCU_29800(332)31357.81161(580)3--    DNA polymerase LigD ligase subunit
> mie:LG41_14150(332)31357.81160(579)4--    ATP-dependent DNA ligase
> mir:OCQ_30550(332)31357.81160(579)3--    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)31357.81160(579)3--    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)31357.81160(579)3--    DNA polymerase LigD ligase subunit
> myo:OEM_29110(332)31357.51153(572)3--    DNA polymerase LigD ligase subunit
> mav:MAV_3148(332)31356.21151(573)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)31356.21151(578)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)31356.21151(578)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)31356.21151(578)3--    ATP-dependent DNA ligase
> mao:MAP4_2518(332)31355.91149(571)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)31355.91149(571)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)31355.91149(571)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)31355.91149(571)0--    hypothetical protein
> sen:SACE_5682(333)31155.01112(627)7--    DNA ligase, ATP-dependent
> rci:RCIX1968(353)31552.41078(821)3--    predicted ATP-dependent DNA ligase
> tee:Tel_12770(335)31452.21066
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_5345(337)30850.61005(615)8--    DNA polymerase LigD, ligase domain protein
> mpd:MCP_2126(334)31249.0997(768)1--    putative ATP-dependent DNA ligase
> bbt:BBta_7782(351)31348.6987(477)3--    putative ATP-dependent DNA ligase
> hbe:BEI_0347(334)31651.9963(862)0-- K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_1369(316)31747.3915(347)0--    ATP-dependent DNA ligase
> lok:Loa_02405(334)31343.5866(144)1--    DNA polymerase LigD, ligase domain protein
> ank:AnaeK_0832(684)29648.0848(446)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)30946.6839(461)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)31638.6827(564)0--    ATP-dependent DNA ligase
> splk:AV944_04690(816)31444.3827(598)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)32143.3825(599)1-> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)32143.3825(599)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)29947.2815(450)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)32042.2813
0-> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)31743.8808(134)5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)31146.6807(39)78-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aza:AZKH_2968(851)31645.3805
0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)32143.0802(702)3-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)31543.2799
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_0282(237)23853.4797(28)5--    lig; DNA ligase, ATP-dependent
> abac:LuPra_01460(663)31644.3793(28)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)31943.3785(386)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcai:K788_0007984(961)32242.2779(278)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rta:Rta_07780(819)31840.9776(394)29-- K01971  ligD ATP-dependent DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)33441.6774(436)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)29545.8773(176)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)31543.2773(418)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)31840.9772(661)1-> K01971  ligD unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ote:Oter_4309(603)32843.9772(369)5-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfu:CFU_1974(830)31741.6771(541)1-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samy:DB32_004561(334)31843.7770(420)6-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)31643.4764(399)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)31943.3761(484)1-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)32541.2761
1-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31444.3759(475)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:RALTA_B2120(916)31044.2759(138)19-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cuh:BJN34_34075(902)31044.5759(183)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smaz:LH19_11415(627)31542.9758(176)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reu:Reut_B5079(901)32045.3756(181)3-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmec:WJ16_17055(911)33042.1753
0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> trs:Terro_2462(949)31641.5753(406)7-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aav:Aave_2519(939)32740.1752(533)85-> K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)32342.7752
5-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> all:CRK60828(484)32341.8751(265)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcz:PCL1606_31290(869)31840.6751(649)4-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphq:BWQ93_02520(664)31542.5751(129)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)32342.4749(434)23-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)31643.0748
1-> K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aaa:Acav_2693(936)32740.4747(513)28-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)32140.5747(517)2-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)31839.9747(645)0-> K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psem:TO66_14815(865)31940.8747(646)2-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpj:N234_33275(956)31642.7747(152)24-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)32641.4746(324)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcq:PcP3B5_27230(850)31943.3746
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmk:MDS_2413(842)31741.0746(527)2-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)32241.9745(433)19-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> prh:LT40_12535(862)32040.6745
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpf:Rpic12D_0488(867)32941.3745
0-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfus:CYFUS_001959(865)31645.9744(417)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> odi:ODI_R4157(824)31940.8744(452)0-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)31338.0744
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arn:CGK93_01640(852)32045.0743(388)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)32342.1743(431)35-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axx:ERS451415_04244(874)32342.1743(431)0-> K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)31643.0743(641)2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bstg:WT74_19350(962)32943.5742
0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cnc:CNE_2c23180(913)31643.4742(143)13-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpy:BA022_07305(837)31840.9742(468)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)32044.4742(301)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgf:BC1003_1569(974)32339.6741(515)14-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)32941.0740
2-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...