GFIT result for T00492

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sen:SACE_3394
(292 a.a.)
 
--
 
    [tr:A4FF44_SACEN] ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ngv:CDO52_22140(303)28859.41152
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_01230(291)27459.91123(535)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5203(287)27759.21071(462)11-- K01971  ligD  [tr:A0A0H3D8J2_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5141(287)27759.21071(462)11-- K01971  ligD  [tr:G0FQR0_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)27759.21071(462)11-- K01971  ligD  [tr:G0FQR0_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)27759.21071(462)11-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_13140(304)28953.31003(532)0-- K01971  ligD DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_13220(304)28953.31003(532)0-- K01971  ligD  [tr:A0A1L7F726_9PSEU] DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_12440(304)28951.6980(512)0-- K01971  ligD ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_12295(305)29252.1972(489)0-- K01971  ligD  [tr:A0A1D8BWT8_9PSEU] DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_0339(312)28047.5855(271)9-- K01971  ligD  [tr:G2PB75_STRVO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_24695(312)27947.3848(279)7-- K01971  ligD  [tr:A0A0A0NK22_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)28045.4846(285)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12940(303)28546.0842(35)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)29243.5818
0-- K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)28643.0815
0-- K01971  ligD  [tr:D1Z0H5_METPS] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sauo:BV401_23550(314)28145.6812(253)0-- K01971  ligD  [tr:A0A1P8XXT5_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)28744.6810
0-- K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)29344.0805(234)0-- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(310)29242.8790(213)2-- K01971  ligD  [tr:A0A0D4DGP5_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbar:AWN76_001560(303)28343.5778
0-- K01971  ligD  [tr:A0A1V0DAF0_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stsi:A4E84_33405(319)29043.8774(182)0-- K01971  ligD  [tr:A0A143CAJ2_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_1370(299)28942.9773(330)0-- K01971  ligD  [tr:A0A1D7W274_BRELN] ATP-dependent DNA ligase LigC; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)28743.2769(200)5-- K01971  ligD  [tr:A0A0B5I658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_4488(313)28144.8765(161)17-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_13250(317)28642.3763(170)0-- K01971  ligD  [tr:A0A1D7VK40_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)27942.3762(222)3-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7216(311)29143.0762(159)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_7456(311)29143.0762(159)12-- K01971  ligD  [tr:H2JMG2_STRHJ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)27942.3757(217)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)27942.3757(218)4-- K01971  ligD  [tr:A0A1X2L0S2_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)27942.3757(218)3-- K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)27941.9753(214)5-- K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15580(296)27942.3752(215)0-- K01971  ligD  [tr:A0A0P7JGJ9_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07099(311)29342.3751(152)0-- K01971  ligD  [tr:A0A0U5LT13_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)28345.2742(167)6-- K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)27941.9741(202)3-- K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)29141.9741(161)4-- K01971  ligD  [tr:A0A089XJS0_STRGA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)31442.0740(197)24-- K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)28345.6739(164)10-- K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_27050(309)28244.3739(156)0-- K01971  ligD  [tr:A0A191V5X6_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strd:NI25_05905(304)29443.9737(154)0-- K01971  ligD  [tr:A0A0N6W6F3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)29138.8732
0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)27942.3732(145)0-- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)28542.1732(175)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)28337.1725
0-- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlt:VC82_553(323)28938.4722
0-- K01971  ligD  [tr:A0A0D5YPS4_9FLAO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_01625(302)28438.7721
0-- K01971  ligD  [tr:A0A1P8F904_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)28943.3719(147)15-- K01971  ligD  [tr:A0A0K2B2C0_STRAM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_1807(302)28339.2718(132)0-- K01971  ligD  [tr:A0A1L7I4L1_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)29538.3715(282)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_6916(312)28341.3709(137)0-- K01971  ligD  [tr:A0A1B1MKK3_STRLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)28942.2708(118)0-- K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_12820(311)29441.2702(114)0-- K01971  ligD  [tr:A0A0F7VLX0_9ACTN] sle_12820; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)27539.6700(166)0-- K01971  ligD  [tr:A0A143PN04_9BACT] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)28441.5699(105)7-- K01971  ligD  [tr:A0A0C5G7H9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strt:A8713_26490(307)29140.9690(76)0-- K01971  ligD  [tr:A0A1A9J3A1_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)28437.7681(142)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)27641.3680(31)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llo:LLO_1004(293)27836.3675
0-- K01971  ligD  [tr:D3HR29_LEGLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ghi:107941224(850)27842.8670(566)0--     [tr:A0A1U8MTV7_GOSHI] multifunctional non-homologous end joining protein LigD-like
> opr:Ocepr_0487(299)29138.5670()1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)25641.8668(140)8-- K01971  ligD  [tr:A0A0B5EW78_STRA4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)27539.6667(567)0-- K01971  ligD  [tr:A0A142YAI4_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sna:Snas_2802(302)29337.5650(127)1-- K01971  ligD  [tr:D3Q8A4_STANL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)28036.8650(161)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbm:TEF_06740(852)27839.9649()0-- K01971  ligD  [tr:A0A192IGW8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpa:lpa_03649(296)27537.8644
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpc:LPC_1974(296)27537.8644
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)28337.5638(52)1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)28037.9637()2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sti:Sthe_0314(301)28534.7637()1-- K01971  ligD  [tr:D1C6Z2_SPHTD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)28136.3635()0-- K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)27639.5635(535)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snw:BBN63_03335(380)29438.8634(80)0-- K01971  ligD  [tr:A0A1U9QMK8_STRNV] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_22120(898)27537.5631(2)0-- K01971  ligD  [tr:A0A142X1L6_9PLAN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)27236.4630(21)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)28934.3622()0-- K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1301(301)27238.6621(91)1--     [tr:Q11IS8_CHESB] conserved hypothetical protein
> cai:Caci_5249(292)25937.5619(47)4-- K01971  ligD  [tr:C7Q6S3_CATAD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nda:Ndas_0258(292)29538.0619
6-- K01971  ligD  [tr:D7AUE9_NOCDD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cio:CEQ15_15855(625)27233.8616(509)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28333.2614()0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)27237.1614()0-- K01971  ligD  [tr:A0A0X8HBT1_9GAMM] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)27836.7613()0-- K01971  ligD  [tr:A5D2W2_PELTS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfg:B0537_09850(302)27934.1612()0-- K01971  ligD  [tr:A0A1S6IX65_9FIRM] DNA polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)28732.4612()0-- K01971  ligD  [tr:A0A0P0CYM1_9BACT] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> actn:L083_0502(307)28137.0609(118)2-- K01971  ligD  [tr:R4L3A1_9ACTN] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> age:AA314_02665(854)27236.0609(92)5-- K01971  ligD  [tr:A0A0G2ZQM1_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)27732.5609(70)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_34930(303)26737.1608()0-- K01971  ligD  [tr:C7MQ32_SACVD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)27833.5607()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)28236.9606()3-- K01971  ligD  [tr:A0A068STE9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)28432.4605(107)3-- K01971  ligD  [tr:C7PLF2_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chry:CEY12_12005(623)28431.3604()0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)28236.9604()1-- K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dti:Desti_0133(309)27834.5602()0-- K01971  ligD  [tr:I4BZY9_DESTA] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sch:Sphch_2999(835)28536.5602()6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xtn:FD63_00155(927)28936.0602(496)32-- K01971  ligD  [tr:A0A0G3LHE4_XANCT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_167(313)29833.2601
0-- K01971  ligD  [tr:V6DGX3_9DELT] ykoU; Eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...