GFIT result for T00492

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sen:SACE_5682
(333 a.a.)
 
--
 
    DNA ligase, ATP-dependent
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pmad:BAY61_01235(306)30567.51450(786)0--    ATP-dependent DNA ligase
> ngv:CDO52_22145(317)31562.51386(1103)0--    ATP-dependent DNA ligase
> amyc:CU254_25885(314)31063.21354(844)0--    ATP-dependent DNA ligase
> amd:AMED_5204(314)30864.01331(780)6--    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)30864.01331(780)6--    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)30864.01331(780)6--    ATP-dependent DNA ligase
> amz:B737_5142(314)30864.01331(780)6--    lig; ATP-dependent DNA ligase
> mia:OCU_29800(332)33158.91246(664)3--    DNA polymerase LigD ligase subunit
> tee:Tel_12770(335)33555.21245
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14150(332)33158.61242(660)4--    ATP-dependent DNA ligase
> mir:OCQ_30550(332)33158.61242(660)3--    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)33158.61242(660)3--    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)33158.61242(660)3--    DNA polymerase LigD ligase subunit
> myo:OEM_29110(332)33158.61241(659)3--    DNA polymerase LigD ligase subunit
> mchi:AN480_15575(332)33158.61239(657)0--    ATP-dependent DNA ligase
> mmal:CKJ54_13680(332)33157.41226(648)0--    ATP-dependent DNA ligase
> spun:BFF78_39610(336)31060.31219(713)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mav:MAV_3148(332)33156.21196(626)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)33156.21196(635)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)33156.21196(635)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)33156.21196(635)3--    ATP-dependent DNA ligase
> mao:MAP4_2518(332)33155.91192(622)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)33155.91192(622)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)33155.91192(622)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)32756.31186(616)0--    hypothetical protein
> sals:SLNWT_5554(334)30957.31164(836)5-- K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_5345(337)33855.01152(782)8--    DNA polymerase LigD, ligase domain protein
> grs:C7S20_03830(333)32848.51150(523)0--    ATP-dependent DNA ligase
> mpd:MCP_2126(334)32251.91147(911)1--    putative ATP-dependent DNA ligase
> rci:RCIX1968(353)33253.01144(887)3--    predicted ATP-dependent DNA ligase
> sct:SCAT_5457(313)31155.01112(812)3--    ligD; DNA polymerase LigD, ligase domain
> scy:SCATT_54560(327)31155.01112(812)4--    DNA polymerase LigD ligase subunit
> bbt:BBta_7782(351)32751.41104(501)3--    putative ATP-dependent DNA ligase
> hbe:BEI_0347(334)33352.31096
0-- K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_1369(316)31151.81044(491)0--    ATP-dependent DNA ligase
> lok:Loa_02405(334)32248.41009(245)1--    DNA polymerase LigD, ligase domain protein
> amq:AMETH_0282(237)22761.2970(276)5--    lig; DNA ligase, ATP-dependent
> dpb:BABL1_gene_166(342)31444.9937(609)0--    ATP-dependent DNA ligase
> llu:AKJ09_09606(855)31349.5912(272)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)31147.9897(494)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)31147.3889(488)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)31147.3882(485)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)32445.4859(517)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)32045.0846(639)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)32946.2822(549)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> simp:C6571_07475(862)31245.2821(623)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)33342.9818(163)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)31844.3815(565)10-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbm:TEF_06740(852)31044.5815(545)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)31245.2813
0-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0832(656)31343.5812(29)16-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nlc:EBAPG3_007500(847)31543.5809
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_09810(315)30945.3808(42)6--    DNA ligase
> bju:BJ6T_19970(315)30945.3808(42)8--    hypothetical protein
> dpy:BA022_07305(837)31844.0808(562)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_08150(315)30946.0804(186)0--    DNA ligase
> hco:LOKO_00656(851)33644.0802(699)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)31744.2801(539)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sva:SVA_1768(815)31744.8801(505)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)32243.8800()1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)31742.9799
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_3871(315)30945.0798(194)0--    ATPdependent DNA ligase EC 6511
> hse:Hsero_2271(856)31642.7798(569)1-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)31642.7798(569)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)31444.9797(459)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)31843.7796(484)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bstg:WT74_19350(962)32246.3795
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhy:RD110_14845(830)31542.9795(541)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbw:BDW_07900(797)31143.1793
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mass:CR152_22400(858)31142.8791(568)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_22120(898)31444.6791(9)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)31343.1791(502)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jaz:YQ44_08770(835)31245.2790(527)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmec:WJ16_17055(911)33045.8789
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)31042.6789()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_01460(663)31844.0787(64)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcep:APZ15_36520(926)32745.6785
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> melm:C7H73_09480(840)31942.9785(540)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:RALTA_B2120(916)31343.5784(126)19-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cuh:BJN34_34075(902)31343.8784(186)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)31544.8783(551)2-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:blr8031(316)30944.0782(163)8--    DNA ligase
> boh:AKI39_06670(873)31443.9782
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_4951(349)33143.2782(36)15-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)31443.6782(529)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpd:VAPA_1c17500(851)31342.5782(489)4-- K01971  ligD putative DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axy:AXYL_06730(840)31341.9781(36)1-- K01971  ligD ligD2; DNA ligase D 2; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samy:DB32_004561(334)33343.5779(447)6-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aca:ACP_3506(863)33941.6777(528)0-- K01971  ligD putative DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blat:WK25_16550(957)32645.1777
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rta:Rta_07780(819)32042.5777(449)29-- K01971  ligD ATP-dependent DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbro:BAU06_06860(884)31942.9775(563)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcew:DM40_5175(957)32645.1775
16-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jsv:CNX70_19225(829)31343.8775(521)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aza:AZKH_2968(851)30944.0774
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bve:AK36_5227(995)32644.8774
43-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)32741.9773(610)2-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)31243.6771(428)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_00676(320)30742.3771
0-- K01971  ligD ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> para:BTO02_12435(966)31943.9771(524)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...