GFIT result for
sfd
|
GFIT result for
sfd
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| sfd:USDA257_c15160 (820 a.a.) |
-- |
ykoU1; putative ATP-dependent DNA ligase YkoU | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sfh:SFHH103_05184(820) | 820 | 89.8 | 5043 | 5 | <> | ATP-dependent DNA ligase | |||
| > rhi:NGR_b20470(820) | 820 | 89.1 | 4980 | 8 | <> | probable ATP-dependent DNA ligase | |||
| > sino:SS05631_b54240(820) | 820 | 84.8 | 4729 | 13 | <> | ATP-dependent DNA ligase clustered with Ku protein, LigD | |||
| > esj:SJ05684_b44470(818) | 816 | 83.8 | 4674 | 7 | <> | ATP-dependent DNA ligase clustered with Ku protein, LigD | |||
| > eak:EKH55_3675(818) | 816 | 83.3 | 4616 | 5 | <> | ATP-dependent DNA ligase | |||
| > same:SAMCFNEI73_pC0595(817) | 820 | 81.7 | 4591 | 10 | <> | ATP-dependent DNA ligase YkoU | |||
| > skm:PZL22_000605(818) | 818 | 81.4 | 4549 | 10 | <> | ligD; DNA ligase D | |||
| > enu:PYH37_002052(819) | 818 | 81.2 | 4543 | 7 | <> | ligD; DNA ligase D | |||
| > smer:DU99_26590(818) | 818 | 81.3 | 4534 | 7 | <> | ATP-dependent DNA ligase | |||
| > smk:Sinme_4343(818) | 818 | 81.3 | 4533 | 5 | <> | DNA polymerase LigD, polymerase domain protein | |||
| > smx:SM11_pD0227(818) | 818 | 81.3 | 4533 | 13 | <> | putative DNA ligase | |||
| > smel:SM2011_b20685(818) | 818 | 81.3 | 4532 | 9 | <> | Putative DNA ligase | |||
| > sme:SM_b20685(818) | 818 | 81.2 | 4527 | 9 | <> | putative DNA ligase | |||
| > smi:BN406_05307(818) | 818 | 81.2 | 4527 | 12 | <> | hypothetical protein | |||
| > smeg:C770_GR4pD0224(818) | 818 | 81.2 | 4525 | 9 | <> | DNA ligase D | |||
| > smq:SinmeB_4835(818) | 818 | 81.1 | 4519 | 7 | <> | DNA polymerase LigD, polymerase domain protein | |||
| > smd:Smed_4303(817) | 817 | 80.7 | 4504 | 5 | <> | DNA ligase D | |||
| > emx:FKV68_27755(824) | 824 | 80.1 | 4469 | 7 | -> | ligD; DNA ligase D | |||
| > egi:PZN02_005797(825) | 825 | 79.9 | 4446 | 4 | -> | ligD; DNA ligase D | |||
| > steg:QA637_26495(825) | 825 | 80.0 | 4437 | 0 | -> | ligD; DNA ligase D | |||
| > eah:FA04_22855(823) | 819 | 76.9 | 4396 | 10 | -> | DNA ligase D | |||
| > enp:JVX98_01225(?) | 819 | 75.9 | 4338 | 0 | -- | - | |||
| > mmei:LRP31_15845(?) | 826 | 75.5 | 4222 | 0 | -- | - | |||
| > moh:IHQ72_15640(828) | 827 | 75.6 | 4216 | 15 | -> | ligD; DNA ligase D | |||
| > mesm:EJ066_27955(833) | 830 | 74.7 | 4192 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mamo:A6B35_15055(831) | 825 | 73.5 | 4155 | 13 | -> | ATP-dependent DNA ligase | |||
| > mesw:A9K65_015260(830) | 826 | 73.5 | 4125 | 9 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mci:Mesci_2798(829) | 821 | 73.9 | 4123 | 8 | -> | DNA ligase D | |||
| > mcic:A4R28_13650(830) | 826 | 73.5 | 4114 | 8 | -> | ATP-dependent DNA ligase | |||
| > mlo:mll2077(833) | 826 | 73.0 | 4109 | 12 | -- | probable ATP-dependent DNA ligase | |||
| > mhua:MCHK_3600(833) | 826 | 72.6 | 4101 | 10 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > merd:EB233_13925(829) | 824 | 72.7 | 4097 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mam:Mesau_03044(835) | 830 | 72.2 | 4093 | 6 | -> | DNA ligase D | |||
| > mln:A9174_16495(833) | 826 | 72.5 | 4088 | 9 | -> | DNA ligase D | |||
| > mjr:EB229_16720(833) | 826 | 72.5 | 4083 | 13 | -> | ligD; DNA ligase D | |||
| > chea:PVE73_23135(?) | 824 | 72.6 | 4072 | 0 | -- | - | |||
| > mop:Mesop_3180(833) | 830 | 72.5 | 4061 | 8 | -> | DNA ligase D | |||
| > anj:AMD1_1538(?) | 822 | 71.7 | 4008 | 0 | -- | - | |||
| > amih:CO731_01532(817) | 822 | 71.7 | 3994 | 7 | -> | Putative DNA ligase-like protein | |||
| > niy:FQ775_23470(817) | 819 | 71.1 | 3956 | 4 | -> | ligD; DNA ligase D | |||
| > amis:Amn_28610(?) | 823 | 71.1 | 3954 | 0 | -- | - | |||
| > aak:AA2016_3584(820) | 823 | 71.0 | 3945 | 8 | -> | ATP-dependent DNA ligase | |||
| > mesp:C1M53_27930(816) | 822 | 67.9 | 3839 | 3 | -> | ligD; DNA ligase D | |||
| > dnp:N8A98_18765(808) | 813 | 66.7 | 3712 | 0 | -> | ligD; DNA ligase D | |||
| > dea:FPZ08_14570(811) | 813 | 66.1 | 3681 | 4 | -> | ligD; DNA ligase D | |||
| > doy:JI749_03875(?) | 812 | 65.9 | 3636 | 0 | -- | - | |||
| > salo:EF888_12800(814) | 815 | 64.4 | 3527 | 4 | -> | ligD; DNA ligase D | |||
| > yti:FNA67_18475(815) | 813 | 63.8 | 3492 | 2 | -> | ligD; DNA ligase D | |||
| > deq:XM25_14770(815) | 815 | 63.4 | 3469 | 1 | -> | ATP-dependent DNA ligase | |||
| > alf:CFBP5473_19675(825) | 833 | 43.8 | 2246 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tmd:KUV46_12140(829) | 820 | 44.6 | 2237 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sphj:BSL82_05400(829) | 841 | 44.0 | 2233 | 3 | -> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > palp:JHW40_03240(821) | 816 | 44.4 | 2226 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > shum:STHU_33190(850) | 847 | 43.3 | 2224 | 9 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pye:A6J80_22380(845) | 846 | 43.0 | 2214 | 10 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mld:U0023_24705(?) | 841 | 43.5 | 2213 | 0 | -- | - | |||
| > hcam:I4484_04370(850) | 847 | 41.6 | 2207 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > htx:EKK97_05265(849) | 847 | 41.8 | 2205 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hsx:HNO51_04330(850) | 848 | 41.9 | 2204 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mico:GDR74_07785(846) | 858 | 43.5 | 2204 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aub:LXB15_12510(881) | 871 | 42.6 | 2198 | 12 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > paak:FIU66_17355(835) | 833 | 43.8 | 2198 | 7 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > paru:CYR75_01430(828) | 833 | 43.5 | 2197 | 8 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hsv:HNO53_04325(852) | 852 | 41.9 | 2191 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > soj:K6301_18910(849) | 862 | 42.0 | 2189 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > moc:BB934_16235(861) | 837 | 42.3 | 2184 | 5 | -> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > metg:HT051_01115(852) | 836 | 42.6 | 2181 | 0 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vgo:GJW-30_1_00121(862) | 866 | 42.6 | 2181 | 10 | -> | K01971 | ligD | ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > phyl:HB779_21000(848) | 845 | 42.5 | 2177 | 0 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > apol:K9D25_00805(844) | 842 | 42.3 | 2171 | 26 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pver:E3U25_04240(?) | 834 | 43.6 | 2171 | 0 | -- | - | |||
| > sphm:G432_04400(849) | 825 | 43.0 | 2171 | 6 | -> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mesr:FGU64_08215(845) | 842 | 43.3 | 2170 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfeo:E3U26_19760(?) | 835 | 43.6 | 2170 | 0 | -- | - | |||
| > mtad:M6G65_14690(842) | 839 | 43.7 | 2162 | 6 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pem:OF122_09050(820) | 835 | 42.3 | 2162 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > shz:shn_27290(850) | 852 | 42.5 | 2158 | 3 | -> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msc:BN69_1443(852) | 849 | 42.8 | 2156 | 5 | -> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nao:Y958_30480(852) | 850 | 42.5 | 2154 | 7 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agr:AGROH133_09757(830) | 834 | 42.4 | 2151 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > stel:STAQ_16730(834) | 834 | 42.8 | 2151 | 11 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roy:G3A56_24970(830) | 835 | 42.8 | 2150 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lne:FZC33_03310(845) | 857 | 42.7 | 2149 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aleg:CFBP4996_24405(?) | 830 | 42.4 | 2148 | 0 | -- | - | |||
| > kai:K32_01750(874) | 871 | 41.8 | 2148 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhey:H2LOC_013050(820) | 820 | 43.7 | 2147 | 2 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > oin:IAR37_07195(838) | 842 | 43.1 | 2147 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmeh:JWJ88_05730(846) | 833 | 42.9 | 2144 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbg:CbuG_0044(815) | 819 | 42.6 | 2143 | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mros:EHO51_01490(852) | 835 | 42.9 | 2143 | 5 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mcg:GL4_0154(848) | 833 | 43.1 | 2142 | 1 | -> | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mes:Meso_1150(845) | 842 | 43.0 | 2142 | 3 | -> | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbc:CbuK_0042(815) | 819 | 42.4 | 2141 | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acuc:KZ699_23050(833) | 834 | 42.4 | 2139 | 0 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ata:AWN88_02590(830) | 835 | 42.2 | 2139 | 4 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbu:CBU_1934(815) | 819 | 42.6 | 2139 | 0 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hadh:FRZ61_26180(889) | 868 | 41.0 | 2139 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsn:NIK97_01575(837) | 837 | 42.7 | 2136 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > star:G3545_03265(855) | 841 | 42.7 | 2136 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rjg:CCGE525_28380(839) | 835 | 42.3 | 2132 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |