GFIT result for
sft
|
GFIT result for
sft
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| sft:NCTC1_01141 (1063 a.a.) |
-- |
K08300 | rne | rne; RNase E,Ribonuclease E,ribonuclease E,Ribonucleases G and E,ribonuclease, Rne/Rng family,Ribonuclease E/G family; K08300 ribonuclease E [EC:3.1.26.12] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sfe:SFxv_1239(1063) | 1063 | 99.9 | 6890 | 5 | -- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sfn:SFy_1572(1063) | 1063 | 99.9 | 6890 | 5 | <> | K08300 | rne | Rne; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sfs:SFyv_1623(1063) | 1063 | 99.9 | 6890 | 5 | <> | K08300 | rne | Rne; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sfl:SF1088(1060) | 1060 | 100.0 | 6875 | 4 | -- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sfx:S1168(1060) | 1060 | 100.0 | 6875 | 5 | -- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sfv:SFV_1106(1061) | 1063 | 99.7 | 6862 | 6 | <> | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecl:EcolC_2516(1061) | 1063 | 99.2 | 6834 | 6 | <> | K08300 | rne | ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ssn:SSON_1104(1061) | 1063 | 99.1 | 6825 | 6 | <- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eoi:ECO111_1361(1061) | 1063 | 99.1 | 6823 | 5 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eoj:ECO26_1417(1061) | 1063 | 99.1 | 6823 | 7 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sbo:SBO_1980(1061) | 1063 | 99.1 | 6821 | 7 | <- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecoa:APECO78_09385(1061) | 1063 | 99.0 | 6818 | 7 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sbc:SbBS512_E2241(1061) | 1063 | 99.0 | 6817 | 10 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecw:EcE24377A_1207(1061) | 1063 | 98.8 | 6811 | 8 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecx:EcHS_A1207(1061) | 1063 | 98.8 | 6804 | 7 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecr:ECIAI1_1120(1061) | 1063 | 98.6 | 6800 | 8 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecy:ECSE_1147(1061) | 1063 | 98.6 | 6800 | 7 | <- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elo:EC042_1153(1061) | 1063 | 98.6 | 6800 | 6 | -> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ece:Z1722(1061) | 1063 | 98.5 | 6796 | 6 | <- | K08300 | rne | rne; RNase E, membrane attachment, mRNA turnover, maturation 5S RNA; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecf:ECH74115_1463(1061) | 1063 | 98.5 | 6796 | 7 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecs:ECs_1462(1061) | 1063 | 98.5 | 6796 | 6 | <> | K08300 | rne | rne; endoribonuclease; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elr:ECO55CA74_06555(1061) | 1063 | 98.5 | 6796 | 7 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elx:CDCO157_1397(1061) | 1063 | 98.5 | 6796 | 6 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eok:G2583_1343(1061) | 1063 | 98.5 | 6796 | 6 | <- | K08300 | rne | rne; Ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] | |
| > etw:ECSP_1385(1061) | 1063 | 98.5 | 6796 | 6 | <- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elf:LF82_1909(1061) | 1063 | 98.5 | 6795 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eln:NRG857_05230(1061) | 1063 | 98.5 | 6795 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eum:ECUMN_1260(1061) | 1063 | 98.5 | 6795 | 6 | -> | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eck:EC55989_1197(1061) | 1063 | 98.4 | 6792 | 3 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecol:LY180_05625(1061) | 1063 | 98.4 | 6792 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ekf:KO11_17300(1061) | 1063 | 98.4 | 6792 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eko:EKO11_2749(1061) | 1063 | 98.4 | 6792 | 5 | <> | K08300 | rne | ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ell:WFL_05820(1061) | 1063 | 98.4 | 6792 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elw:ECW_m1191(1061) | 1063 | 98.4 | 6792 | 5 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > esl:O3K_15140(1061) | 1063 | 98.4 | 6792 | 3 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > esm:O3M_15115(1061) | 1063 | 98.4 | 6792 | 3 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eso:O3O_10160(1061) | 1063 | 98.4 | 6792 | 3 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ect:ECIAI39_2076(1061) | 1063 | 98.4 | 6789 | 8 | -- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eoc:CE10_1165(1061) | 1063 | 98.4 | 6789 | 8 | -> | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecg:E2348C_1176(1061) | 1063 | 98.4 | 6788 | 8 | -- | K08300 | rne | rne; fused ribonuclease E: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecq:ECED1_1228(1061) | 1063 | 98.3 | 6784 | 7 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elh:ETEC_1149(1061) | 1063 | 98.3 | 6781 | 8 | <- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ebw:BWG_0932(1061) | 1063 | 98.3 | 6778 | 9 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecd:ECDH10B_1155(1061) | 1063 | 98.3 | 6778 | 9 | <- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecj:JW1071(1061) | 1063 | 98.3 | 6778 | 9 | <- | K08300 | rne | rne; fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eco:b1084(1061) | 1063 | 98.3 | 6778 | 9 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecoc:C3026_06565(?) | 1063 | 98.3 | 6778 | 0 | -- | - | |||
| > ecok:ECMDS42_0904(1061) | 1063 | 98.3 | 6778 | 9 | -- | K08300 | rne | rne; fused ribonucleaseE endoribonuclease/scaffold for formation of degradosome; K08300 ribonuclease E [EC:3.1.26.12] | |
| > edh:EcDH1_2562(1061) | 1063 | 98.3 | 6778 | 9 | <> | K08300 | rne | ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] | |
| > edj:ECDH1ME8569_1019(1061) | 1063 | 98.3 | 6778 | 9 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ebd:ECBD_2516(1061) | 1063 | 98.2 | 6776 | 7 | <> | K08300 | rne | ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ebe:B21_01088(1061) | 1063 | 98.2 | 6776 | 7 | <- | K08300 | rne | rne; RNase E, subunit of ribonuclease E and degradosome; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ebl:ECD_01080(1061) | 1063 | 98.2 | 6776 | 7 | <- | K08300 | rne | rne; endoribonuclease; RNA-binding protein;RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ebr:ECB_01080(1061) | 1063 | 98.2 | 6776 | 7 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecob:C3029_09875(?) | 1063 | 98.2 | 6776 | 0 | -- | - | |||
| > eun:UMNK88_1352(1061) | 1063 | 98.2 | 6776 | 8 | <- | K08300 | rne | ribonuclease E (RNase E); K08300 ribonuclease E [EC:3.1.26.12] | |
| > shq:A0259_09560(1061) | 1063 | 98.2 | 6776 | 7 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecoj:P423_05835(1061) | 1063 | 98.2 | 6774 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecos:EC958_1279(1061) | 1063 | 98.2 | 6774 | 5 | <- | K08300 | rne | RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ena:ECNA114_1141(1061) | 1063 | 98.2 | 6774 | 6 | <> | K08300 | rne | rne; Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ese:ECSF_0983(1061) | 1063 | 98.2 | 6774 | 5 | <- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eab:ECABU_c12980(1061) | 1063 | 98.1 | 6772 | 6 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecc:c1353(1061) | 1063 | 98.1 | 6772 | 5 | <- | K08300 | rne | rne; Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eci:UTI89_C1209(1061) | 1063 | 98.3 | 6771 | 4 | <- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecoi:ECOPMV1_01163(1061) | 1063 | 98.3 | 6771 | 5 | <- | K08300 | rne | rne; Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecv:APECO1_166(1061) | 1063 | 98.3 | 6771 | 5 | <- | K08300 | rne | rne; Rnase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecz:ECS88_1098(1061) | 1063 | 98.3 | 6771 | 6 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eih:ECOK1_1192(1061) | 1063 | 98.3 | 6771 | 4 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eoh:ECO103_1129(1061) | 1063 | 98.2 | 6770 | 7 | <- | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecoh:ECRM13516_1332(1061) | 1063 | 98.1 | 6767 | 9 | <- | K08300 | rne | rne; Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecoo:ECRM13514_1375(1061) | 1063 | 98.1 | 6767 | 8 | <- | K08300 | rne | rne; Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elc:i14_1237(1061) | 1063 | 98.0 | 6767 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eld:i02_1237(1061) | 1063 | 98.0 | 6767 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecp:ECP_1076(1061) | 1063 | 98.1 | 6761 | 3 | <- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sdy:SDY_2067(1061) | 1063 | 98.0 | 6760 | 6 | <- | K08300 | rne | rne; RNase E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sdz:Asd1617_02773(1061) | 1063 | 98.0 | 6760 | 4 | -> | K08300 | rne | Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > elu:UM146_11905(1058) | 1060 | 98.3 | 6751 | 5 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ecm:EcSMS35_2042(1057) | 1063 | 98.0 | 6745 | 4 | -> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eruy:OSH18_04365(1061) | 1063 | 95.6 | 6641 | 6 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > esz:FEM44_20250(1061) | 1063 | 95.2 | 6597 | 9 | <> | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ema:C1192_06845(1059) | 1063 | 95.2 | 6588 | 6 | <- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > eal:EAKF1_ch0345(1069) | 1073 | 92.3 | 6449 | 7 | <> | K08300 | rne | rne; Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > efe:EFER_1844(1059) | 1078 | 83.9 | 5751 | 6 | <> | K08300 | rne | rne; fused ribonucleaseE: endoribonuclease; RNA-binding protein; RNA degradosome binding protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > cko:CKO_01975(1065) | 1082 | 82.4 | 5690 | 8 | <> | K08300 | rne | hypothetical protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > cir:C2U53_20445(1097) | 1111 | 81.5 | 5628 | 10 | -- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > caf:AL524_16925(1097) | 1111 | 81.4 | 5625 | 13 | -- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > ses:SARI_01812(1069) | 1078 | 82.1 | 5607 | 2 | <> | K08300 | rne | hypothetical protein; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sea:SeAg_B2003(1067) | 1080 | 82.6 | 5595 | 3 | <> | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > seeh:SEEH1578_15155(1067) | 1080 | 82.6 | 5595 | 3 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > seh:SeHA_C1297(1067) | 1080 | 82.6 | 5595 | 3 | <> | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > senh:CFSAN002069_03095(1067) | 1080 | 82.6 | 5595 | 3 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sens:Q786_09335(1067) | 1080 | 82.6 | 5595 | 3 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > shb:SU5_01812(1067) | 1080 | 82.6 | 5595 | 3 | <- | K08300 | rne | Ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > salz:EOS98_13630(1068) | 1081 | 82.5 | 5594 | 5 | -- | K08300 | rne | ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > senc:SEET0819_12570(1068) | 1081 | 82.6 | 5592 | 3 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > cens:P2W74_14145(?) | 1082 | 81.4 | 5591 | 0 | -- | - | |||
| > seec:CFSAN002050_12315(1068) | 1081 | 82.5 | 5591 | 3 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > seb:STM474_1181(1067) | 1080 | 82.2 | 5586 | 6 | <- | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > seen:SE451236_11775(1067) | 1080 | 82.2 | 5586 | 6 | <> | K08300 | rne | rne; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |
| > sef:UMN798_1232(1067) | 1080 | 82.2 | 5586 | 5 | <> | K08300 | rne | ams; ribonuclease E; K08300 ribonuclease E [EC:3.1.26.12] | |