GFIT result for T02063

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

shy:SHJG_7456
(311 a.a.)
 
--
 
K01971  ligD  [tr:H2JMG2_STRHJ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> sho:SHJGH_7216(311)311100.02136(1486)12<> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07099(311)31090.31952(1317)0<> K01971  ligD  [tr:A0A0U5LT13_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_12820(311)31378.01652(993)0<> K01971  ligD  [tr:A0A0F7VLX0_9ACTN] sle_12820; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)31074.81616(973)4<> K01971  ligD  [tr:A0A089XJS0_STRGA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)31476.11614(926)15<> K01971  ligD  [tr:A0A0K2B2C0_STRAM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strd:NI25_05905(304)30278.51614(919)0<> K01971  ligD  [tr:A0A0N6W6F3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_6916(312)31375.71608(939)0<> K01971  ligD  [tr:A0A1B1MKK3_STRLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)30277.21605(924)6<> K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stsi:A4E84_33405(319)32174.11604(969)0<> K01971  ligD  [tr:A0A143CAJ2_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)30577.01602(934)7<> K01971  ligD  [tr:A0A0C5G7H9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)30276.51585(904)10<> K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)30276.21585(929)0<- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)31075.21568(900)0<> K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_27050(309)31174.01556(888)0<> K01971  ligD  [tr:A0A191V5X6_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strt:A8713_26490(307)30473.41523(861)0<> K01971  ligD  [tr:A0A1A9J3A1_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)32867.11474(843)24<> K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_13250(317)30868.81417(799)0-- K01971  ligD  [tr:A0A1D7VK40_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)30668.61373(724)8-- K01971  ligD  [tr:A0A0B5EW78_STRA4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)31564.41337(673)0<- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)30165.81306(660)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snw:BBN63_03335(380)29764.61292(662)0-- K01971  ligD  [tr:A0A1U9QMK8_STRNV] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_0339(312)30762.51261(602)9-- K01971  ligD  [tr:G2PB75_STRVO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)31162.71259(627)5-- K01971  ligD  [tr:A0A0B5I658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sauo:BV401_23550(314)30761.91254(589)0-- K01971  ligD  [tr:A0A1P8XXT5_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_4488(313)31163.01250(576)17-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_24695(312)30761.91248(561)7-- K01971  ligD  [tr:A0A0A0NK22_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(310)30959.21153(529)2-- K01971  ligD  [tr:A0A0D4DGP5_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbar:AWN76_001560(303)30655.91118(1011)0-- K01971  ligD  [tr:A0A1V0DAF0_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12940(303)30850.3988(28)0-- K01971  ligD  [tr:A0A099D555_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)30150.8939(332)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)30150.8939(333)4-- K01971  ligD  [tr:A0A1X2L0S2_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_13685(296)30150.5939(324)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)30150.8939(333)3-- K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)30150.8936(330)5-- K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)29948.2935(335)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)30150.5933(327)3-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)29249.0931
0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)30947.6925(812)0-- K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15580(296)30150.2924(320)0-- K01971  ligD  [tr:A0A0P7JGJ9_9MYCO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)30150.2924(318)3-- K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)30248.7909
0-- K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)29947.8899(300)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_1807(302)29944.8888(381)0-- K01971  ligD  [tr:A0A1L7I4L1_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlt:VC82_553(323)29744.4870
0-- K01971  ligD  [tr:A0A0D5YPS4_9FLAO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)27848.2870
0-- K01971  ligD  [tr:D1Z0H5_METPS] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nda:Ndas_0258(292)31049.7860(745)6-- K01971  ligD  [tr:D7AUE9_NOCDD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_01230(291)29744.1841(203)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)30143.5829(242)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)29544.4824(277)0-- K01971  ligD  [tr:A0A143PN04_9BACT] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_1370(299)29944.5823(239)0-- K01971  ligD  [tr:A0A1D7W274_BRELN] ATP-dependent DNA ligase LigC; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngv:CDO52_22140(303)30743.0817(671)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5203(287)29544.4813(102)11-- K01971  ligD  [tr:A0A0H3D8J2_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5141(287)29544.4813(102)11-- K01971  ligD  [tr:G0FQR0_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)29544.4813(102)11-- K01971  ligD  [tr:G0FQR0_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)29544.4813(102)11-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_01625(302)29942.8797
0-- K01971  ligD  [tr:A0A1P8F904_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nal:B005_3125(304)29947.8785(669)1-- K01971  ligD  [tr:J7LBG3_NOCAA] ligD; DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_3248(328)29941.8762(29)7-- K01971  ligD  [tr:A7HFE5_ANADF] DNA polymerase LigD polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_3394(292)29143.0762(118)3--     [tr:A4FF44_SACEN] ATP-dependent DNA ligase
> dpb:BABL1_gene_167(313)28936.7737
0-- K01971  ligD  [tr:V6DGX3_9DELT] ykoU; Eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sct:SCAT_5514(335)27544.0724(149)8--     [tr:F8JRK1_STREN] conserved protein of unknown function
> scy:SCATT_55170(335)27544.0724(149)8--     [tr:F8JRK1_STREN] hypothetical protein
> fsi:Flexsi_0431(291)29136.1721
0-- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)31441.4720(612)0-- K01971  ligD  [tr:A0A0K2SMK4_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoh:Hoch_3330(896)31739.1714(161)65-- K01971  ligD  [tr:D0LUZ1_HALO1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)28142.0705(582)0-- K01971  ligD  [tr:A0A142YAI4_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_12440(304)29740.4696(155)0-- K01971  ligD ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strm:M444_27905(332)26142.5693(203)3--     [tr:A0A0G3UXE9_9ACTN] ATP-dependent DNA ligase
> hrb:Hrubri_2562(861)28241.1689
0-- K01971  ligD  [tr:A0A0U3LYM1_9BURK] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)31239.7688(583)3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)28138.8686(86)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sbh:SBI_08909(334)26242.0684(120)1--     [tr:D7BZY7_STRBB] hypothetical protein
> ksk:KSE_05320(173)16866.1683(368)25-- K01971  ligD  [tr:E4N597_KITSK] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mih:BJP65_15745(831)30538.4683(174)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cceu:CBR64_00560(865)31237.8681(158)0-- K01971  ligD  [tr:A0A1Y0HSD3_CELCE] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)28440.8681(174)15-- K01971  ligD  [tr:W0RSS2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rgi:RGI145_02130(305)28842.4681(563)0-- K01971  ligD  [tr:A0A1L7ABK1_9PROT] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kse:Ksed_19790(878)32437.3680(103)9-- K01971  ligD  [tr:C7NKD9_KYTSD] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_13140(304)29740.1679(156)0-- K01971  ligD DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_13220(304)29740.1679(154)0-- K01971  ligD  [tr:A0A1L7F726_9PSEU] DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cet:B8281_10560(894)31337.4679(134)0-- K01971  ligD  [tr:A0A1W6DQD0_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)29339.6676
1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)29339.6676
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daa:AKL17_3157(812)30240.7675(552)0-- K01971  ligD  [tr:A0A165SRM4_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_12295(305)28841.0673(155)0-- K01971  ligD  [tr:A0A1D8BWT8_9PSEU] DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmh:VO01_09615(836)30739.4673(548)13-- K01971  ligD  [tr:A0A0D5CI80_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aym:YM304_28920(349)30540.0671(215)3--     [tr:M5A494_9ACTN] hypothetical protein
> cmc:CMN_02036(834)30739.1670(546)9-- K01971  ligD  [tr:M5BA09_9MICO] ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)29438.1670(65)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aja:AJAP_24085(335)29739.4669(107)7--     [tr:A0A075UYX2_9PSEU] ATP-dependent DNA ligase
> bbm:BN115_2300(820)30240.7669(528)19-- K01971  ligD Putative ATP-dependent DNA-ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sdv:BN159_1715(338)26441.3667(106)3--     [tr:K4R0C7_9ACTN] DNA polymerase LigD, polymerase domain-containing protein
> tmr:Tmar_1127(316)31240.1666(555)4-- K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ghi:107941224(850)29639.9665
0--     [tr:A0A1U8MTV7_GOSHI] multifunctional non-homologous end joining protein LigD-like
> opr:Ocepr_0487(299)31439.5662(562)1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thw:BMG03_06005(802)25841.5662(549)0-- K01971  ligD  [tr:A0A1S6ID59_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbh:BN112_0647(820)30040.7660(521)20-- K01971  ligD  [tr:A0A0C6P035_BORBO] ATP-dependent DNA-ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbr:BB2845(820)30040.7660(519)13-- K01971  ligD  [tr:A0A0H3LN90_BORBR] Putative ATP-dependent DNA-ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)27338.5660
1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sclf:BB341_03015(338)26440.9660(186)0--    ATP-dependent DNA ligase
... ... ...