GFIT result for T00058

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sme:SM_b20912
(364 a.a.)
 
--
 
K01971  E6.5.1.1  [tr:Q92UC4_RHIME] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> smel:SM2011_b20912(364)364100.02482(1368)12<> K01971  E6.5.1.1  [tr:M4MLN3_SINM2] Putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smq:SinmeB_1662(336)31191.61966(291)12-- K01971  E6.5.1.1  [tr:F6BMT3_SINMB] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smi:BN406_00784(344)31188.71911(148)18-- K01971  E6.5.1.1  [tr:K0PE95_RHIML] DNA polymerase LigD ligase region; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smx:SM11_chr2371(345)31188.11907(865)18-- K01971  E6.5.1.1  [tr:F7X3M8_SINMM] ligD; DNA polymerase LigD ligase region; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smd:Smed_1305(343)31188.11892(400)8-> K01971  E6.5.1.1  [tr:A6U925_SINMW] DNA polymerase LigD ligase region; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sfd:USDA257_c29030(324)31172.31574(282)9-- K01971  E6.5.1.1  [tr:I3X6G8_RHIFR] DNA ligase-like protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sfh:SFHH103_01641(327)31169.81506(795)10-- K01971  E6.5.1.1  [tr:G9A7A8_RHIFH] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rle:pRL110115(346)31560.01230(153)8--     [tr:Q1M6S1_RHIL3] putative DNA ligase
> rlg:Rleg_7010(350)31661.11230(26)9-- K01971  E6.5.1.1  [tr:C6B7H2_RHILS] DNA polymerase LigD, ligase domain protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rhl:LPU83_1547(346)31658.21225(62)12-- K01971  E6.5.1.1 DNA polymerase LigD, ligase domain protein (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlb:RLEG3_18615(348)31759.01223(163)8-- K01971  E6.5.1.1 ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlt:Rleg2_2396(349)31659.21222(141)7-- K01971  E6.5.1.1  [tr:B5ZUW2_RHILW] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rlu:RLEG12_29475(349)31657.91189(22)13-- K01971  E6.5.1.1 ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ead:OV14_c0035(348)31456.41181(10)8-- K01971  E6.5.1.1 putative ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rel:REMIM1_PC00076(354)31455.71153(45)5-- K01971  E6.5.1.1  [tr:S5SQX0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rec:RHECIAT_CH0001158(350)31757.11145(53)11-- K01971  E6.5.1.1  [tr:B3PSX3_RHIE6] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rir:BN877_p0681(343)31554.61142(122)6-- K01971  E6.5.1.1  [tr:U4QFY4_9RHIZ] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rtr:RTCIAT899_PB00395(354)31454.11125(324)3-- K01971  E6.5.1.1  [tr:L0LRP5_RHITR] putative ATP-dependent DNA ligase protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ret:RHE_PE00251(354)31453.51107(387)5-- K01971  E6.5.1.1  [tr:Q2K0P1_RHIEC] DNA ligase (ATP) protein (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> atu:Atu5051(345)29954.21100(58)6--     [tr:A9CLR5_AGRT5] ATP-dependent DNA ligase
> agr:AGROH133_14625(350)31949.81033(327)4-- K01971  E6.5.1.1  [tr:F0LG13_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> msl:Msil_3103(336)29846.3880(238)2--     [tr:B8EKY4_METSB] DNA polymerase LigD, ligase domain-containing protein
> scu:SCE1572_21330(687)30445.4864(458)192-- K01971  E6.5.1.1  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> scl:sce3523(762)30445.1831(498)439-- K01971  E6.5.1.1  [tr:A9GRV1_SORC5] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rva:Rvan_0633(970)30245.7826(580)66-- K01971  E6.5.1.1  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> oan:Oant_4315(834)30446.7821(610)17-- K01971  E6.5.1.1  [tr:A6X711_OCHA4] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bid:Bind_0382(644)30145.8809(564)4-- K01971  E6.5.1.1  [tr:B2IE11_BEII9] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hmc:HYPMC_2434(356)30244.0793(553)3-- K01971  E6.5.1.1  [tr:F8JHK1_HYPSM] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sno:Snov_0819(842)32343.7788(529)44-- K01971  E6.5.1.1  [tr:D7A5M0_STAND] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rhi:NGR_b04710(850)30941.7786(79)26-- K01971  E6.5.1.1  [tr:Q6W1H3_RHISN] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smeg:C770_GR4pC0120(609)29844.3786(29)15-- K01971  E6.5.1.1  [tr:M4ILJ2_RHIML] DNA ligase D (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> azc:AZC_1006(900)30644.4779(535)96-- K01971  E6.5.1.1  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hdn:Hden_1069(356)32140.5779(520)2-- K01971  E6.5.1.1  [tr:D8JV67_HYPDA] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mes:Meso_1150(845)30044.3778(438)23-- K01971  E6.5.1.1  [tr:Q11J79_CHESB] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hdt:HYPDE_32333(356)30441.8771(506)3-- K01971  E6.5.1.1  [tr:N0BDC6_9RHIZ] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pla:Plav_2977(845)31639.9770(667)6-- K01971  E6.5.1.1  [tr:A7HXF1_PARL1] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gdj:Gdia_2239(856)31743.5769(655)78-- K01971  E6.5.1.1  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> gdi:GDI_0169(856)31643.4763(659)77-- K01971  E6.5.1.1  [tr:A9H268_GLUDA] DNA ligase-like protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpd:RPD_2161(313)30045.7759(93)5-- K01971  E6.5.1.1  [tr:Q138U3_RHOPS] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpt:Rpal_2316(313)30045.7759(90)6-- K01971  E6.5.1.1  [tr:B3QDT3_RHOPT] DNA polymerase LigD, ligase domain-containing protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> vpe:Varpa_2796(854)32740.4758(158)28-- K01971  E6.5.1.1  [tr:E6V3W5_VARPE] DNA ligase d; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cti:RALTA_B0290(845)31042.6748(15)30-- K01971  E6.5.1.1  [tr:B2AI89_CUPTR] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> smk:Sinme_5055(628)29841.9748(55)10--     [tr:F6E9N8_SINMK] DNA ligase D
> mop:Mesop_0815(853)29743.1742(101)26-- K01971  E6.5.1.1  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> hse:Hsero_2271(856)31740.7737(466)21-- K01971  E6.5.1.1  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mlo:mll4606(829)29743.4736(106)25-- K01971  E6.5.1.1  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bju:BJ6T_42920(306)30840.3733(79)9-- K01971  E6.5.1.1  [tr:G7D3T3_BRAJP] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mci:Mesci_0783(837)29742.8732(89)21-- K01971  E6.5.1.1  [tr:E8TFS2_MESCW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bpt:Bpet3441(822)35739.5730(612)41-- K01971  E6.5.1.1  [tr:A9HXI5_BORPD] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mam:Mesau_00823(846)29743.4726(28)18-- K01971  E6.5.1.1  [tr:L0KDE8_MESAW] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aaa:Acav_2693(936)32640.5724(469)139-- K01971  E6.5.1.1  [tr:F0Q2F4_ACIAP] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> cnc:CNE_BB1p08120(842)32041.3722(1)34-- K01971  E6.5.1.1  [tr:F8GU22_CUPNN] ATP dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> phl:KKY_1733(820)30141.2720(463)13-- K01971  E6.5.1.1  [tr:G4RCU3_PELHB] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aav:Aave_2519(939)32941.0717(423)246-- K01971  E6.5.1.1  [tr:A1TQ54_ACIAC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pfv:Psefu_2816(852)31637.7713(497)19-- K01971  E6.5.1.1  [tr:F6AI24_PSEF1] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bja:blr8022(306)30739.1711(21)8-- K01971  E6.5.1.1  [tr:Q89BX6_BRADU] DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> mpt:Mpe_B0011(864)31235.9711(455)22-- K01971  E6.5.1.1  [tr:A2SMK3_METPP] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> eli:ELI_04125(839)31938.9708(453)17-- K01971  E6.5.1.1  [tr:Q2NBM4_ERYLH] hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)30139.9707(488)11-- K01971  E6.5.1.1 DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sch:Sphch_2999(835)31937.6706(465)32-- K01971  E6.5.1.1  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> psg:G655_14430(840)30742.3704(590)48-- K01971  E6.5.1.1  [tr:M9S2Y5_PSEAI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> tsa:AciPR4_1657(957)31538.7703(468)23-- K01971  E6.5.1.1  [tr:E8V3A7_TERSS] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ade:Adeh_0784(658)30339.6702(321)365-- K01971  E6.5.1.1  [tr:Q2IP30_ANADE] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bug:BC1001_1764(652)32141.1702(37)12--     [tr:E8YPK2_9BURK] DNA ligase D
> reu:Reut_B5079(901)32940.1702(8)24-- K01971  E6.5.1.1  [tr:Q46R07_CUPPJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rge:RGE_26430(851)35136.2702(382)142-- K01971  E6.5.1.1  [tr:I0HSJ5_RUBGI] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> aex:Astex_1372(847)32140.8701(443)3-- K01971  E6.5.1.1  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> bcm:Bcenmc03_6073(927)33041.2701(593)52-- K01971  E6.5.1.1  [tr:B1KAE7_BURCC] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> brs:S23_15390(889)32137.7701(372)19-- K01971  E6.5.1.1  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> acp:A2cp1_0836(683)30339.3700(340)434-- K01971  E6.5.1.1  [tr:B8JDU3_ANAD2] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> axy:AXYL_00438(842)30639.2700(42)20-- K01971  E6.5.1.1  [tr:E3HUH3_ACHXA] ligD1; DNA ligase D 1 (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ank:AnaeK_0832(684)30339.3699(351)467-- K01971  E6.5.1.1  [tr:B4UEC1_ANASK] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> msc:BN69_1443(852)30441.8698(424)21-- K01971  E6.5.1.1  [tr:J7Q463_METSZ] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paem:U769_14610(840)30742.0697(585)38-- K01971  E6.5.1.1  [tr:V5SYF6_PSEAI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)30440.8695(417)37-- K01971  E6.5.1.1  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pnc:NCGM2_3118(840)30741.7694(578)48-- K01971  E6.5.1.1  [tr:G4LGL0_PSEAI] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpa:RPA3650(914)31840.3694(430)47-> K01971  E6.5.1.1  [tr:Q6N3P3_RHOPA] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> ajs:Ajs_2523(837)31139.9693(411)46-- K01971  E6.5.1.1  [tr:A1W8V8_ACISJ] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rcu:RCOM_0053280(841)30739.7693(459)22--     [tr:B9TB64_RICCO] hypothetical protein
> pae:PA2138(840)30741.7692(580)46-- K01971  E6.5.1.1  [sp:LIGD_PSEAE] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paec:M802_2202(840)30741.7692(580)47-- K01971  E6.5.1.1 ligD; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paei:N296_2205(840)30741.7692(580)46-- K01971  E6.5.1.1 ligD; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pael:T223_16290(840)30741.7692(580)39-- K01971  E6.5.1.1  [tr:V9T8M1_PSEAI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paeo:M801_2204(840)30741.7692(580)40-- K01971  E6.5.1.1 ligD; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paep:PA1S_gp5804(840)30741.7692(581)46-- K01971  E6.5.1.1  [tr:U6AM46_PSEAI] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paer:PA1R_gp5617(840)30741.7692(581)45-- K01971  E6.5.1.1  [tr:U6B6F8_PSEAI] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paes:SCV20265_3244(840)30741.7692(580)46-- K01971  E6.5.1.1  [tr:V9U5X6_PSEAI] ATP-dependent DNA ligaseclustered with Ku protein, LigD (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paev:N297_2205(840)30741.7692(580)46-- K01971  E6.5.1.1 ligD; DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pag:PLES_31891(840)30741.7692(580)41-- K01971  E6.5.1.1  [tr:B7V9X1_PSEA8] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pau:PA14_36910(840)30741.7692(581)39-- K01971  E6.5.1.1  [tr:Q02LS9_PSEAB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> pdk:PADK2_14980(840)30741.7692(581)46-- K01971  E6.5.1.1  [tr:I6RZA8_PSEAI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> prp:M062_11085(840)30741.7692(580)46-- K01971  E6.5.1.1  [tr:R9ZRH6_PSEAI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> paf:PAM18_2902(840)30741.7691(579)47-- K01971  E6.5.1.1  [tr:G2L4S2_PSEAI] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> rpj:N234_37775(826)32138.3691(29)23-- K01971  E6.5.1.1  [tr:U3R2K5_RALPI] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
> afw:Anae109_0832(656)30341.9690(50)85-- K01971  E6.5.1.1  [tr:A7H8J7_ANADF] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> sphm:G432_04400(849)31539.4690(445)46-- K01971  E6.5.1.1  [tr:M4SD88_9SPHN] DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> trs:Terro_2462(949)32537.5690(354)28-- K01971  E6.5.1.1  [tr:I3ZHJ5_TERRK] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> byi:BYI23_E001150(631)30238.7689(11)12-- K01971  E6.5.1.1  [tr:G8MPL1_9BURK] ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
> nha:Nham_3852(315)31540.3689(44)4--     [tr:Q1QGU2_NITHX] ATP dependent DNA ligase
> pzu:PHZ_c3259(887)31838.7688(220)86-- K01971  E6.5.1.1  [tr:B4RAS0_PHEZH] ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
... ... ...