GFIT result for T00058

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sme:SMc03959
(865 a.a.)
 
--
 
K01971  ligD  [tr:Q92M95_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> smel:SM2011_c03959(865)865100.05748(3652)9<> K01971  ligD  [tr:M4MX75_SINM2] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)865100.05748(3383)8<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)865100.05748(3378)13<> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)865100.05748(3654)7<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_chr2907(865)865100.05748(3380)14<> K01971  ligD  [tr:F7X888_SINMM] probabable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4Chr2868(865)86599.85741(3349)9<> K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)86599.95738(3645)5<> K01971  ligD DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)86589.45232(3122)5<> K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)86383.54942(2554)9-> K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)86482.24880(2655)3-> K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)86482.44875(2471)7-> K01971  ligD  [tr:C3MIG9_RHISN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hoe:IMCC20628_02615(834)86754.93045(2793)0--    ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1)
> ssy:SLG_04290(835)86154.53001(2636)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mey:TM49_01330(829)86653.22972
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)86353.82935(2668)0--    ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1)
> sch:Sphch_2999(835)84554.32915(2683)6-- K01971  ligD  [tr:F6F2G7_SPHCR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsq:Rsph17025_1218(846)87252.12875(2587)5-- K01971  ligD  [tr:A4WRV5_RHOS5] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phl:KKY_1733(820)85952.52871(2634)1-- K01971  ligD  [tr:G4RCU3_PELHB] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)85952.62866(2628)3-- K01971  ligD  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssan:NX02_27130(831)85951.82852(189)0--    hypothetical protein
> rsh:Rsph17029_1337(868)89049.82821(2501)6-- K01971  ligD  [tr:A3PJD1_RHOS1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> syb:TZ53_20775(831)85951.22819(2573)3-- K01971  ligD  [tr:A0A0C5XXI0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsp:RSP_2679(868)89049.42815(2499)8-- K01971  ligD  [tr:Q3J300_RHOS4] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)89249.62811(2487)10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphk:SKP52_18625(835)86652.12810(134)3-- K01971  ligD  [tr:A0A0A7PKR9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eli:ELI_04125(839)84351.12809(2584)2-- K01971  ligD  [tr:Q2NBM4_ERYLH] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_3982(837)83552.12788(846)7-- K01971  ligD  [tr:A5VDG1_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)84352.02764(2436)4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)86749.52758(1825)1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)87351.12754(2549)1-- K01971  ligD  [tr:Q2G7N8_NOVAD] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)86449.82753(2642)0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)86552.12751(2453)6-- K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphi:TS85_18230(810)85850.92694(2416)3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)87148.72677(467)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)87548.72676(480)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)86348.42654(428)6-- K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)86348.02596(352)11-- K01971  ligD  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cid:P73_3679(812)83549.92581(2346)7-- K01971  ligD  [tr:A0A0B5DZF4_9RHOB] DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)86447.02553(2449)0-- K01971  ligD  [tr:C8WIH5_EGGLE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)92345.12548(2317)10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)87146.02527(2287)1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccel:CCDG5_0620(826)86345.92521
0-- K01971  ligD  [tr:A0A078KJE6_9FIRM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eyy:EGYY_19050(833)87446.12489
0-- K01971  ligD  [tr:F7UV10_EEGSY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmi:Desmer_2946(818)85745.02465(2363)0-- K01971  ligD  [tr:J7IT26_DESMD] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)86946.82457(1256)3-- K01971  ligD  [tr:Q11J79_CHESB] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aca:ACP_3506(863)86845.52454(2226)0-- K01971  ligD  [tr:C1F736_ACIC5] DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgy:Sgly_0962(813)85745.62448
0-- K01971  ligD  [tr:F0T2I5_SYNGF] ATP-dependent DNA ligase subunit LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddh:Desde_0514(812)85645.92444
0-- K01971  ligD  [tr:I4A4U0_DESDJ] ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)86347.02441(2197)6-- K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dor:Desor_2615(813)85745.32432
0-- K01971  ligD  [tr:G7W6F7_DESOD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dhd:Dhaf_0568(818)85645.02421
0-- K01971  ligD  [tr:B8FUY8_DESHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dai:Desaci_2451(813)85444.72414
2-- K01971  ligD  [tr:I4D6H7_DESAJ] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dsy:DSY0616(818)85644.92411
0-- K01971  ligD  [tr:Q24ZY7_DESHY] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)88844.72407(185)6-- K01971  ligD  [tr:Q7D410_AGRT5] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpy:Cphy_1729(813)85744.52398
0-- K01971  ligD  [tr:A9KS69_CLOPH] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)87643.22393(2293)1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)89044.02393(1613)6-- K01971  ligD putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:bll6773(892)85945.52391(1707)11-- K01971  ligD  [tr:Q89FC8_BRADU] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)89445.22391(851)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)87844.82388(2173)1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5638(882)89344.72385(37)6-- K01971  ligD  [tr:C6B958_RHILS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)88944.22376(1615)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)89144.72373(778)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)86145.42372(1637)2-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)86145.42372(2125)1-- K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)89144.72372(776)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)86245.02371(1535)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmo:TMO_a0311(812)87645.42369(2110)18-- K01971  ligD  [tr:I3TSH6_TISMK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ddl:Desdi_2684(815)85644.62367
0-- K01971  ligD  [tr:L0F8G4_DESDL] ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)89544.22363(2148)1-- K01971  ligD  [tr:B6JFK1_OLICO] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)89544.22363(2148)1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)89544.22363(2148)1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lha:LHA_0995(831)85744.12362(2154)1-- K01971  ligD  [tr:A0A0A8URC6_LEGHA] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)87444.22362(1582)3-- K01971  ligD  [tr:L0M010_RHITR] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)86744.82350(1587)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_14508(887)89444.22349(52)4-- K01971  ligD  [tr:F0LFT4_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)88145.32349(1594)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_12895(888)85945.22347(1649)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_26450(888)85945.22347(1649)10-- K01971  ligD  [tr:G7DBZ5_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)89244.62346(17)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)86745.12346(1579)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI_0169(856)86645.62339
4-- K01971  ligD  [tr:A9H268_GLUDA] DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)86645.62339(2234)7-- K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pzu:PHZ_c3259(887)88445.52339(1563)18-- K01971  ligD  [tr:B4RAS0_PHEZH] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)89644.22339(1582)7-- K01971  ligD  [tr:B6A397_RHILW] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brs:S23_15390(889)85744.92336(1911)3-- K01971  ligD  [tr:I0G1W9_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)88045.02334(2091)5-- K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)85444.72322(2108)1-- K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpa:RPA3650(914)90144.72322(2105)9-- K01971  ligD  [tr:Q6N3P3_RHOPA] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)85344.82320(1663)3-- K01971  ligD  [tr:A0A068STE9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)89043.62317(1626)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpt:Rpal_4171(914)90044.62316(1593)14-- K01971  ligD  [tr:B3QGJ0_RHOPT] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nha:Nham_3907(900)88343.52310(129)9-- K01971  ligD  [tr:Q1QGQ0_NITHX] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gma:AciX8_1368(920)88742.22306(2130)2-- K01971  ligD  [tr:G8NZZ5_GRAMM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)85345.42306(1502)4-- K01971  ligD  [tr:B8EKE2_METSB] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_6329(895)90244.22305(1652)6-- K01971  ligD  [tr:A5EQ03_BRASB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpc:RPC_3685(911)87244.42300(2065)7-- K01971  ligD  [tr:Q210G6_RHOPB] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpx:Rpdx1_1701(914)90143.82299(2056)14-- K01971  ligD  [tr:E6VKS9_RHOPX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)89943.22298(2047)8-- K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)93142.92294(2187)3-- K01971  ligD  [tr:F3YU59_DESAF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...