GFIT result for T02332

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

smi:BN406_00784
(344 a.a.)
 
--
 
K01971  ligD  DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> smx:SM11_chr2371(345)34388.62104(1067)15-- K01971  ligD  [tr:F7X3M8_SINMM] ligD; DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_1305(343)34389.22101(606)6-- K01971  ligD  [tr:A6U925_SINMW] DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_1662(336)32389.51990(306)8-- K01971  ligD  [tr:A0A0E0UDQ1_SINMB] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SM_b20912(364)31188.71911(773)9-- K01971  ligD  [tr:Q92UC4_RHIME] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_b20912(364)31188.71911(773)9-- K01971  ligD  [tr:M4MLN3_SINM2] Putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c29030(324)32371.81638(293)9-- K01971  ligD  [tr:I3X6G8_RHIFR] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> same:SAMCFNEI73_pA0041(306)30475.31609(192)0-- K01971  ligD  [tr:A0A1L3LSE6_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_01641(327)32569.81582(853)7-- K01971  ligD  [tr:G9A7A8_RHIFH] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_33110(324)32363.81480(10)0-- K01971  ligD  [tr:A0A1S0RP02_ENSAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vg:26737567(330)32465.11472(241)0-- K01971  ligD  [tr:A0A076GD42_9CAUD] AWJ26_gp36; Sinorhizobium phage phiLM21; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL110115(346)32758.71264(151)6-- K01971  ligD  [tr:Q1M6S1_RHIL3] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_2396(349)34854.61260(147)5-- K01971  ligD  [tr:B5ZUW2_RHILW] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_4447(312)30859.71256(402)2--    ligD; DNA ligase D
> rhl:LPU83_1547(346)32757.81247(75)11-- K01971  ligD  [tr:W6R8I0_9RHIZ] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_7010(350)32858.21236(8)7-- K01971  ligD  [tr:C6B7H2_RHILS] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_CH03287(347)32857.31235(141)6-- K01971  ligD  [tr:A0A0B4X7Y9_9RHIZ] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_18615(348)32956.81229(137)7-- K01971  ligD  [tr:W0IG54_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> six:BSY16_6219(348)31158.81229(111)0-- K01971  ligD  [tr:A0A1B3MGL6_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_18745(349)34854.61221(18)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_c0035(348)32656.11218(38)6-- K01971  ligD  [tr:W8INW8_ENSAD] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvv:BHK69_02820(346)31260.31215(43)0-- K01971  ligD  [tr:A0A1D7TWT4_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rht:NT26_2255(346)32756.31205(14)0-- K01971  ligD  [tr:L0NGG3_9RHIZ] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_CH03783(347)32756.91201(510)4-- K01971  ligD  [tr:A0A0A8GK49_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0001158(350)34954.21196(55)4-- K01971  ligD  [tr:B3PSX3_RHIE6] probable ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_24590(346)31256.41186(368)0-- K01971  ligD  [tr:A0A126P296_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_CH03739(347)32756.31186(7)6--     [tr:A0A060I9U3_RHIET] ATP-dependent DNA ligase protein
> rir:BN877_p0681(343)33254.51177(114)4-- K01971  ligD  [tr:U4QFY4_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PC00076(354)32854.91172(32)5-- K01971  ligD  [tr:S5SQX0_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_04510(343)33254.21162(35)0-- K01971  ligD  [tr:A0A109VSI2_RHIRD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhn:AMJ98_CH02611(350)34951.91158(51)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpha:AMC79_PB00198(355)31256.41153(438)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5051(345)33154.11152(82)5-- K01971  ligD  [tr:A9CLR5_AGRFC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PB00395(354)32853.71147(320)2-- K01971  ligD  [tr:L0LRP5_RHITR] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_31120(351)32753.51136(390)0-- K01971  ligD  [tr:A0A1A9GC07_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00251(354)31255.41129(406)4-- K01971  ligD  [tr:Q2K0P1_RHIEC] putative DNA ligase (ATP) protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhx:AMK02_PE00261(354)31255.41124(388)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19535(342)32853.01099(352)7--    ATP-dependent DNA ligase
> agr:AGROH133_14625(350)33350.81077(352)3-- K01971  ligD  [tr:F0LG13_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_49040(350)33450.61071(355)2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH06180(298)29448.6937(218)3--     [tr:A0A068SKX0_RHIGA] DNA polymerase LigD-like ligase domain-containing protein
> msl:Msil_3103(336)33444.0896(280)2-- K01971  ligD  [tr:B8EKY4_METSB] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)31245.8895(497)47-- K01971  ligD  [tr:S4Y1N2_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)31246.2879(534)82-- K01971  ligD  [tr:A9GRV1_SORC5] unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)31246.8854(655)1-- K01971  ligD  [tr:A6X711_OCHA4] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)31845.9849(605)10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bid:Bind_0382(644)31044.8836(599)2-- K01971  ligD  [tr:B2IE11_BEII9] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)30845.5825(500)3-- K01971  ligD  [tr:Q11J79_CHESB] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)33242.8814(276)9-- K01971  ligD  [tr:A0A0K1QB33_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdn:Hden_1069(356)33042.1813(559)1-- K01971  ligD  [tr:D8JV67_HYPDA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hmc:HYPMC_2434(356)31244.6801(543)1-- K01971  ligD  [tr:F8JHK1_HYPSM] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)31742.6801(559)6-- K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pye:A6J80_22380(845)30944.7800(520)0-- K01971  ligD  [tr:A0A1V0GYX4_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdt:HYPDE_32333(356)31242.6798(540)1-- K01971  ligD  [tr:N0BDC6_9RHIZ] DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_b04710(850)31043.5792(76)7-- K01971  ligD  [tr:Q6W1H3_SINFN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> meso:BSQ44_02815(861)30943.0789(530)0-- K01971  ligD  [tr:A0A1L3SLZ4_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aak:AA2016_6337(865)34042.1786(80)0-- K01971  ligD  [tr:A0A142MFW3_AMIAI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_30010(605)30741.4786(137)0-- K01971  ligD  [tr:A0A109QCF1_9BRAD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphj:BSL82_05400(829)31244.2785(526)0-- K01971  ligD  [tr:A0A1L3ZT89_9SPHN] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)34942.1782(557)8-- K01971  ligD  [tr:A8HV36_AZOC5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0120(609)29941.8778(11)8-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agc:BSY240_2160(862)32541.5777(557)0-- K01971  ligD  [tr:A0A1B3NZS8_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)32343.7774()7-- K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI0169(856)32343.3768()4-- K01971  ligD  [tr:A9H268_GLUDA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)33038.5767()0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)31142.8763(77)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpe:Varpa_2796(854)36437.9763(156)6-- K01971  ligD  [tr:E6V3W5_VARPE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbm:TEF_06740(852)30340.3762(530)0-- K01971  ligD  [tr:A0A192IGW8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)36339.1759(90)6-- K01971  ligD  [tr:E8TFS2_MESCW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cti:RALTA_B0290(845)32441.7758(2)5-- K01971  ligD  [tr:B2AI89_CUPTR] Putative ATP dependent DNA ligase, eukaryotic type primase C-term domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpd:RPD_2161(313)29945.5758(114)4-- K01971  ligD  [tr:Q138U3_RHOPS] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpt:Rpal_2316(313)29945.5758(106)4-- K01971  ligD  [tr:B3QDT3_RHOPT] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31643.4757(512)7-- K01971  ligD  [tr:A0A0K1EK48_CHOCO] ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_20840(306)30839.9756(56)6-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_42920(306)30839.9756(56)9-- K01971  ligD  [tr:G7D3T3_BRAJP] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:blr8022(306)30941.4754(68)8-- K01971  ligD  [tr:Q89BX6_BRADU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mesw:A9K65_004035(837)36338.8753(90)0-- K01971  ligD  [tr:A0A1W6X1F3_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_5055(628)32538.2752(36)3-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhz:RHPLAN_34800(859)30041.3751(107)0-- K01971  ligD  [tr:A0A127EUJ3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)36040.0750(111)11-- K01971  ligD  [tr:Q98DP8_RHILO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mamo:A6B35_04445(841)33040.3749(54)0-- K01971  ligD  [tr:G6Y5E4_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nao:Y958_30480(852)31541.3748(15)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)36139.3747(32)4-- K01971  ligD  [tr:L0KDE8_MESAW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psin:CAK95_22200(899)33938.9742(384)0-- K01971  ligD  [tr:A0A1W6ZVW3_9RHIZ] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_3749(571)29342.0739(3)0-- K01971  ligD  [tr:A0A160UBY8_BRASZ] ATPdependent DNA ligase EC 6511 clustered with Ku protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cnc:CNE_BB1p08120(842)32340.9738(3)5-- K01971  ligD  [tr:F8GU22_CUPNN] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mln:A9174_03965(829)35939.6738(78)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)30640.5737(525)1-- K01971  ligD  [tr:A0A068TDW9_RHIGA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> miu:ABE85_05760(889)32940.4735(462)0-- K01971  ligD  [tr:A0A1A9HJF6_9BURK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rgu:A4W93_03945(824)32440.4732(438)0-- K01971  ligD  [tr:A0A1W6L4B4_9BURK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfv:Psefu_2816(852)33138.1729(516)4-- K01971  ligD  [tr:F6AI24_PSEF1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> skr:BRX40_17275(838)30939.8726(482)0-- K01971  ligD  [tr:A0A1L6JDL6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> span:AWL63_03665(816)33839.1726(501)0-- K01971  ligD  [tr:A0A1B3Z726_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)32940.4724(618)1-- K01971  ligD  [tr:A9HXI5_BORPD] unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)32638.7722(473)1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)32638.7722(473)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)32340.6722()1-- K01971  ligD  [tr:A0A0A8K0U2_9RHIZ] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)31240.1721(332)105-- K01971  ligD  [tr:Q2IP30_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)31839.3721(360)136-- K01971  ligD  [tr:B4UEC1_ANASK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> byi:BYI23_E001150(631)31539.0721(53)4-- K01971  ligD  [tr:G8MPL1_9BURK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)31839.3719(350)136-- K01971  ligD  [tr:B8JDU3_ANAD2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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