GFIT result for
ssh
|
GFIT result for
ssh
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ssh:NCTC13712_01339 (1009 a.a.) |
-- |
K03546 | sbcC | sbcC; Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > suh:SAMSHR1132_11910(1009) | 1009 | 91.2 | 5823 | 13 | <> | K03546 | sbcC | Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > srot:ML435_06245(?) | 1009 | 89.4 | 5715 | 0 | -- | - | |||
| > suf:SARLGA251_12550(1009) | 1009 | 68.4 | 4517 | 7 | <- | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > sah:SaurJH1_1435(1009) | 1009 | 68.3 | 4513 | 12 | <> | K03546 | sbcC | putative exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > saj:SaurJH9_1408(1009) | 1009 | 68.3 | 4513 | 12 | <> | K03546 | sbcC | ATPase involved in DNA repair-like protein; K03546 DNA repair protein SbcC/Rad50 | |
| > sau:SA1181(1009) | 1009 | 68.3 | 4513 | 11 | <> | K03546 | sbcC | ORFID:SA1181; hypothetical protein, similar to exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > saud:CH52_12330(1009) | 1009 | 68.3 | 4513 | 10 | <> | K03546 | sbcC | nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sauj:SAI2T2_1009680(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sauk:SAI3T3_1009670(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sauq:SAI4T8_1009660(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > saut:SAI1T1_2009660(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sauv:SAI7S6_1009670(1009) | 1009 | 68.3 | 4513 | 11 | <- | K03546 | sbcC | Putative Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sauw:SAI5S5_1009630(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > saux:SAI6T6_1009640(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sauy:SAI8T7_1009670(1009) | 1009 | 68.3 | 4513 | 10 | <- | K03546 | sbcC | Putative Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sav:SAV1346(1009) | 1009 | 68.3 | 4513 | 12 | <> | K03546 | sbcC | similar to exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > saw:SAHV_1335(1009) | 1009 | 68.3 | 4513 | 11 | <> | K03546 | sbcC | hypothetical protein; K03546 DNA repair protein SbcC/Rad50 | |
| > suc:ECTR2_1205(1009) | 1009 | 68.3 | 4513 | 11 | <> | K03546 | sbcC | exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > suy:SA2981_1301(1009) | 1009 | 68.2 | 4507 | 12 | <> | K03546 | sbcC | sbcC; Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sad:SAAV_1327(1009) | 1009 | 68.2 | 4505 | 9 | <> | K03546 | sbcC | sbcC; exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sauc:CA347_1285(1009) | 1009 | 68.2 | 4504 | 12 | <> | K03546 | sbcC | sbcC; nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sams:NI36_06640(1009) | 1009 | 68.2 | 4502 | 9 | <> | K03546 | sbcC | nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > saue:RSAU_001228(1009) | 1009 | 68.2 | 4502 | 8 | <> | K03546 | sbcC | exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > saug:SA268_1245(1009) | 1009 | 68.2 | 4502 | 10 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > saus:SA40_1225(1009) | 1009 | 68.2 | 4502 | 6 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > sauu:SA957_1240(1009) | 1009 | 68.2 | 4502 | 8 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > sue:SAOV_1359(1009) | 1009 | 68.2 | 4502 | 7 | <> | K03546 | sbcC | exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > suu:M013TW_1294(1009) | 1009 | 68.2 | 4502 | 8 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > suz:MS7_1305(1009) | 1009 | 68.3 | 4497 | 11 | <> | K03546 | sbcC | sbcC; nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > saun:SAKOR_01282(1009) | 1009 | 68.2 | 4496 | 9 | <> | K03546 | sbcC | Exonuclease sbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sam:MW1233(1009) | 1009 | 68.1 | 4489 | 9 | <- | K03546 | sbcC | ORFID:MW1233; hypothetical protein, similar to exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > saa:SAUSA300_1243(1009) | 1009 | 68.1 | 4488 | 8 | <> | K03546 | sbcC | sbcC; exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sac:SACOL1382(1009) | 1009 | 68.1 | 4487 | 7 | <> | K03546 | sbcC | sbcC; exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sae:NWMN_1258(1009) | 1009 | 68.1 | 4487 | 8 | <- | K03546 | sbcC | sbcC; exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sauf:X998_1356(1009) | 1009 | 68.1 | 4487 | 7 | <> | K03546 | sbcC | nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > saui:AZ30_06555(1009) | 1009 | 68.1 | 4487 | 9 | <> | K03546 | sbcC | nuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > saum:BN843_12620(1009) | 1009 | 68.1 | 4487 | 8 | <> | K03546 | sbcC | Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sauz:SAZ172_1359(1009) | 1009 | 68.1 | 4487 | 8 | <> | K03546 | sbcC | Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sax:USA300HOU_1281(1009) | 1009 | 68.1 | 4487 | 8 | -- | K03546 | sbcC | sbcC; exodeoxyribonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > suj:SAA6159_01213(1009) | 1009 | 68.0 | 4487 | 11 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sut:SAT0131_01417(1009) | 1009 | 68.1 | 4487 | 8 | <> | K03546 | sbcC | Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > suw:SATW20_13480(1009) | 1009 | 68.1 | 4487 | 10 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > saur:SABB_00163(1009) | 1009 | 68.1 | 4486 | 7 | <> | K03546 | sbcC | sbcC; Nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sas:SAS1286(1009) | 1009 | 68.0 | 4484 | 7 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > suv:SAVC_05970(1009) | 1009 | 68.0 | 4481 | 7 | <> | K03546 | sbcC | exodeoxyribonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sux:SAEMRSA15_11930(1009) | 1009 | 68.0 | 4481 | 8 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > suk:SAA6008_01312(1009) | 1009 | 68.0 | 4479 | 9 | <> | K03546 | sbcC | sbcC; exonuclease subunit SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sar:SAR1357(1009) | 1009 | 67.7 | 4471 | 11 | <- | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > saua:SAAG_01957(1009) | 1009 | 67.7 | 4471 | 13 | <> | K03546 | sbcC | nuclease sbcCD subunit C protein; K03546 DNA repair protein SbcC/Rad50 | |
| > suq:HMPREF0772_11862(1009) | 1009 | 67.7 | 4471 | 14 | <> | K03546 | sbcC | exonuclease SbcCD, C subunit; K03546 DNA repair protein SbcC/Rad50 | |
| > saub:C248_1382(1009) | 1009 | 67.6 | 4463 | 9 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > sud:ST398NM01_1348(1009) | 1009 | 67.6 | 4463 | 10 | <> | K03546 | sbcC | SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sug:SAPIG1348(1009) | 1009 | 67.6 | 4463 | 9 | <> | K03546 | sbcC | exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sab:SAB1204(990) | 989 | 67.5 | 4382 | 7 | <> | K03546 | sbcC | exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > ssim:SAMEA4384339_1245(1009) | 1009 | 51.6 | 3348 | 13 | <> | K03546 | sbcC | sbcC; Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sdo:SD1155_08895(1009) | 1024 | 48.2 | 2950 | 12 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > spas:STP1_2377(1005) | 1017 | 48.0 | 2925 | 12 | <> | K03546 | sbcC | exonuclease SbcCD, C subunit; K03546 DNA repair protein SbcC/Rad50 | |
| > swa:A284_06895(1007) | 1014 | 46.8 | 2924 | 16 | <> | K03546 | sbcC | hypothetical protein; K03546 DNA repair protein SbcC/Rad50 | |
| > sepp:SEB_01053(1009) | 1013 | 45.3 | 2898 | 7 | <> | K03546 | sbcC | Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > seps:DP17_2353(1009) | 1013 | 45.3 | 2898 | 10 | <> | K03546 | sbcC | sbcC; nuclease sbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > ser:SERP0918(1009) | 1013 | 45.3 | 2898 | 9 | <> | K03546 | sbcC | sbcC; exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sep:SE_1029(1009) | 1013 | 45.1 | 2889 | 9 | <> | K03546 | sbcC | exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > scar:DWB96_07640(1009) | 1010 | 45.4 | 2882 | 17 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > scap:AYP1020_0655(1009) | 1011 | 45.5 | 2872 | 11 | <> | K03546 | sbcC | sbcC; Nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > ssac:I6I31_08840(999) | 1010 | 45.7 | 2848 | 10 | -> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sdev:Q2T90_00105(?) | 1022 | 45.8 | 2815 | 0 | -- | - | |||
| > sha:SH1561(1011) | 1027 | 46.3 | 2776 | 15 | <> | K03546 | sbcC | unnamed protein product; hypothetical protein, similar to exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > shh:ShL2_01438(1011) | 1027 | 46.3 | 2774 | 14 | <> | K03546 | sbcC | sbcC; exonuclease subunit SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sln:SLUG_15520(1008) | 1021 | 45.3 | 2774 | 9 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > slg:SLGD_01552(1008) | 1021 | 45.2 | 2768 | 9 | <> | K03546 | sbcC | Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > stas:HYI43_07255(1011) | 1024 | 44.3 | 2741 | 10 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > snl:BJD96_07620(1008) | 1009 | 41.7 | 2625 | 5 | <> | K03546 | sbcC | nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > shom:EGX58_11120(1011) | 1022 | 43.5 | 2624 | 13 | <- | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sllo:ISP08_07395(1009) | 1021 | 41.3 | 2616 | 9 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > spsd:JMB28_07985(1009) | 1009 | 41.2 | 2616 | 14 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sarl:SAP2_14860(1009) | 1011 | 39.8 | 2606 | 6 | <> | K03546 | sbcC | sbcC; nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > scoh:BZ166_11600(1008) | 1016 | 41.6 | 2603 | 2 | <> | K03546 | sbcC | ATP-binding cassette family protein; K03546 DNA repair protein SbcC/Rad50 | |
| > seqo:SE1039_11750(1009) | 1014 | 41.5 | 2603 | 5 | <> | K03546 | sbcC | nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > stap:AOB58_592(?) | 1014 | 41.4 | 2599 | 0 | -- | - | |||
| > sury:MUA21_05480(1008) | 1016 | 41.7 | 2590 | 7 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > skl:C7J89_09085(1009) | 1015 | 41.1 | 2585 | 7 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > ssp:SSP1411(1009) | 1013 | 41.2 | 2585 | 7 | <> | K03546 | sbcC | putative exonuclease; K03546 DNA repair protein SbcC/Rad50 | |
| > sxl:SXYLSMQ121_1452(1009) | 1009 | 41.2 | 2569 | 8 | <> | K03546 | sbcC | Exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > sxo:SXYL_01537(1009) | 1009 | 41.1 | 2566 | 10 | <> | K03546 | sbcC | sbcC; Nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > seda:MNY58_07870(1009) | 1007 | 40.8 | 2562 | 0 | <- | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sxy:BE24_04030(1009) | 1009 | 41.0 | 2557 | 7 | <> | K03546 | sbcC | nuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > scaq:QMO72_07915(?) | 1023 | 41.1 | 2530 | 0 | -- | - | |||
| > saul:I6G39_06700(1009) | 1009 | 38.2 | 2513 | 8 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > ssif:AL483_04990(1012) | 1011 | 39.1 | 2479 | 10 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > spet:CEP67_01370(1008) | 1015 | 39.0 | 2467 | 15 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sdb:CNQ82_06775(1011) | 1014 | 38.2 | 2407 | 8 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sca:SCA_0988(1011) | 1014 | 39.3 | 2398 | 11 | <> | K03546 | sbcC | putative ATPase involved in DNA repair; K03546 DNA repair protein SbcC/Rad50 | |
| > spic:SAMEA4384060_1590(1011) | 1014 | 38.7 | 2389 | 10 | <> | K03546 | sbcC | sbcC; putative DNA repair ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sagq:EP23_02775(1010) | 1014 | 34.8 | 2122 | 8 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > sscu:CEP64_06625(1007) | 1030 | 36.0 | 2095 | 8 | <- | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > shu:SHYC_07655(1010) | 1022 | 34.6 | 2081 | 6 | <> | K03546 | sbcC | sbcC; exonuclease SbcCD subunit C; K03546 DNA repair protein SbcC/Rad50 | |
| > sff:FOB90_00545(1010) | 1026 | 35.5 | 2079 | 6 | <> | K03546 | sbcC | AAA family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > srai:LN051_06505(1010) | 1026 | 34.9 | 2072 | 3 | <> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |
| > ssch:LH95_06895(1010) | 1031 | 35.2 | 2068 | 4 | <> | K03546 | sbcC | exonuclease SbcC; K03546 DNA repair protein SbcC/Rad50 | |
| > schr:DWB92_07145(1010) | 1015 | 33.6 | 2066 | 2 | -> | K03546 | sbcC | SMC family ATPase; K03546 DNA repair protein SbcC/Rad50 | |