GFIT result for
ssub
|
GFIT result for
ssub
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ssub:CP968_14860 (272 a.a.) |
-- |
K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > snf:JYK04_04899(270) | 272 | 97.1 | 1684 | 26 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syan:NRK68_19110(272) | 273 | 96.0 | 1670 | 44 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxt:KPP03845_103447(271) | 272 | 95.6 | 1664 | 28 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svn:CP980_15030(271) | 272 | 95.2 | 1662 | 45 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgk:PET44_18605(?) | 272 | 94.5 | 1649 | 0 | -- | - | |||
| > strm:M444_19930(271) | 272 | 94.5 | 1649 | 27 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slx:SLAV_21485(270) | 272 | 93.0 | 1621 | 45 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgz:C0216_02125(264) | 272 | 93.4 | 1595 | 31 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 272 | 89.0 | 1534 | 25 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slia:HA039_14355(264) | 272 | 89.3 | 1534 | 20 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slk:SLUN_22755(264) | 272 | 89.3 | 1521 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfic:EIZ62_13885(259) | 272 | 90.1 | 1518 | 18 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snw:BBN63_13890(266) | 272 | 88.2 | 1516 | 18 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgx:H4W23_17935(263) | 274 | 89.1 | 1515 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > staa:LDH80_22655(263) | 274 | 88.7 | 1512 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxn:IAG42_19960(267) | 273 | 87.2 | 1509 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spad:DVK44_12985(265) | 272 | 88.2 | 1507 | 23 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svt:SVTN_16575(263) | 274 | 88.3 | 1506 | 20 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > speu:CGZ69_20195(282) | 283 | 85.9 | 1505 | 24 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sve:SVEN_3185(261) | 274 | 88.3 | 1503 | 26 | <> | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slon:LGI35_25495(263) | 272 | 87.1 | 1501 | 29 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srk:FGW37_14890(277) | 278 | 86.0 | 1501 | 25 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > saov:G3H79_15715(257) | 272 | 87.9 | 1497 | 27 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scin:CP977_15330(261) | 274 | 87.6 | 1497 | 17 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgj:IAG43_17895(281) | 281 | 86.1 | 1496 | 44 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slau:SLA_3247(270) | 280 | 86.4 | 1496 | 36 | <> | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stir:DDW44_17150(278) | 280 | 85.4 | 1492 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sjn:RI060_17780(?) | 272 | 87.5 | 1491 | 0 | -- | - | |||
| > sfb:CP974_17170(260) | 273 | 88.3 | 1490 | 41 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srn:A4G23_03168(260) | 273 | 88.3 | 1490 | 46 | <> | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sroc:RGF97_18830(?) | 279 | 86.0 | 1489 | 0 | -- | - | |||
| > spri:SPRI_3359(280) | 283 | 86.2 | 1488 | 30 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scir:STRCI_004614(257) | 272 | 87.5 | 1487 | 40 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdv:BN159_3983(257) | 272 | 87.5 | 1487 | 39 | <> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sov:QZH56_19460(?) | 273 | 87.9 | 1487 | 0 | -- | - | |||
| > scha:CP983_18625(257) | 272 | 87.1 | 1486 | 36 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schf:IPT68_20630(256) | 272 | 87.5 | 1486 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salw:CP975_20030(262) | 273 | 87.5 | 1485 | 26 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salf:SMD44_04936(257) | 272 | 87.1 | 1483 | 31 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspb:CP982_24045(256) | 272 | 88.2 | 1482 | 25 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfp:QUY26_16575(?) | 272 | 87.1 | 1481 | 0 | -- | - | |||
| > slf:JEQ17_26405(258) | 272 | 86.8 | 1481 | 35 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stui:GCM10017668_39780(256) | 272 | 87.1 | 1481 | 20 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sauh:SU9_015525(261) | 272 | 87.9 | 1480 | 17 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdw:K7C20_17360(261) | 272 | 87.9 | 1480 | 12 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spla:CP981_18155(261) | 272 | 87.9 | 1480 | 21 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stud:STRTU_003842(261) | 272 | 87.9 | 1480 | 0 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scoa:QU709_17790(?) | 272 | 87.1 | 1479 | 0 | -- | - | |||
| > skg:KJK29_15545(?) | 272 | 86.8 | 1479 | 0 | -- | - | |||
| > slc:SL103_01485(261) | 272 | 87.9 | 1479 | 18 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stro:STRMOE7_18375(261) | 272 | 87.9 | 1479 | 19 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sanu:K7396_19440(262) | 272 | 87.5 | 1478 | 14 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyn:N8I84_22950(?) | 272 | 87.5 | 1478 | 0 | -- | - | |||
| > shaw:CEB94_23325(256) | 272 | 87.1 | 1478 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snk:CP967_19315(262) | 272 | 87.5 | 1478 | 21 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snr:SNOUR_22510(262) | 272 | 87.9 | 1478 | 17 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stre:GZL_04927(262) | 272 | 87.9 | 1478 | 21 | <> | K03088 | rpoE | RNA polymerase C sigma-24 subunit C ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syun:MOV08_22925(?) | 272 | 87.9 | 1478 | 0 | -- | - | |||
| > sfk:KY5_4536c(272) | 278 | 86.3 | 1477 | 35 | <> | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sine:KI385_21325(261) | 272 | 87.5 | 1477 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scae:IHE65_18705(258) | 272 | 86.8 | 1476 | 36 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scb:SCAB_39121(258) | 272 | 86.8 | 1476 | 34 | <> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scx:AS200_21415(259) | 272 | 87.9 | 1476 | 34 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smob:J7W19_14715(270) | 276 | 85.9 | 1476 | 29 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spav:Spa2297_18565(264) | 275 | 86.9 | 1475 | 24 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssx:SACTE_2784(258) | 272 | 88.2 | 1475 | 17 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scoe:CP976_24770(256) | 272 | 86.8 | 1474 | 30 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strd:NI25_16760(264) | 275 | 86.9 | 1474 | 22 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shun:DWB77_03416(262) | 274 | 88.0 | 1473 | 18 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ska:CP970_18750(264) | 273 | 87.2 | 1473 | 34 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slai:P8A22_22250(?) | 272 | 88.2 | 1472 | 0 | -- | - | |||
| > samb:SAM23877_4236(264) | 275 | 87.3 | 1471 | 22 | <> | K03088 | rpoE | ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphv:F9278_29435(258) | 272 | 86.4 | 1471 | 23 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sarg:HKX69_15000(?) | 275 | 85.8 | 1470 | 0 | -- | - | |||
| > sall:SAZ_20975(262) | 272 | 87.1 | 1469 | 22 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salu:DC74_3969(262) | 272 | 87.1 | 1469 | 20 | <> | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sanl:KZO11_15155(?) | 272 | 86.8 | 1469 | 0 | -- | - | |||
| > sbh:SBI_06006(270) | 282 | 84.4 | 1469 | 43 | <> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspo:DDQ41_18215(278) | 280 | 85.0 | 1469 | 22 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdec:L3078_26980(258) | 272 | 86.4 | 1468 | 34 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snig:HEK616_72540(261) | 272 | 87.1 | 1468 | 20 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssia:A7J05_15960(261) | 273 | 86.8 | 1467 | 21 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgm:GCM10017557_47180(258) | 272 | 85.7 | 1466 | 22 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspn:LXH13_18565(257) | 272 | 86.0 | 1465 | 33 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stsi:A4E84_23055(256) | 272 | 86.4 | 1465 | 25 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kbu:Q4V64_30035(?) | 272 | 86.0 | 1464 | 0 | -- | - | |||
| > scal:I6J39_19880(259) | 273 | 86.8 | 1464 | 19 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfy:GFH48_18345(258) | 272 | 86.8 | 1464 | 31 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgal:CP966_20830(256) | 272 | 86.0 | 1464 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svu:B1H20_20065(259) | 273 | 86.8 | 1464 | 18 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seng:OJ254_10515(?) | 272 | 86.8 | 1463 | 0 | -- | - | |||
| > sld:T261_4497(261) | 272 | 86.8 | 1463 | 18 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snz:DC008_19740(257) | 272 | 86.0 | 1463 | 28 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stsu:B7R87_19305(289) | 289 | 83.7 | 1463 | 37 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sata:C5746_18535(258) | 272 | 87.5 | 1462 | 21 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfa:Sfla_3545(261) | 272 | 86.4 | 1462 | 18 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sge:DWG14_03706(257) | 272 | 86.0 | 1462 | 30 | <> | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sact:DMT42_22150(261) | 275 | 86.2 | 1461 | 23 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgr:SGR_4151(258) | 272 | 86.4 | 1461 | 23 | <> | K03088 | rpoE | adsA; RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shk:J2N69_21060(282) | 286 | 83.9 | 1461 | 27 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |