GFIT result for T01601

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ssx:SACTE_0551
(186 a.a.)
 
--
 
    [tr:G2NK67_STREK] DNA ligase D, 3'-phosphoesterase domain protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> sfa:Sfla_5714(184)18280.21033(923)1--     [tr:E8WEF8_STRFA] DNA ligase D, 3'-phosphoesterase domain protein
> strp:F750_0875(184)18280.21033(927)1--     [tr:M9TLW6_9ACTN] ligD; ATP-dependent DNA ligase clustered with Ku protein
> scz:ABE83_32310(195)18276.9962(855)0--     [tr:A0A0M5J5J7_9ACTN] 3'-phosphoesterase
> sfi:SFUL_645(217)18276.4961
1--     [tr:N0CKT2_9ACTN] DNA ligase D, 3'-phosphoesterase domain protein
> kab:B7C62_01975(195)18275.3951(842)0-- K01971  ligD  [tr:A0A1V0V1S1_9ACTN] 3'-phosphoesterase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgb:WQO_02620(187)18474.5940(836)0--     [tr:A0A0U3LV23_STRGL] 3'-phosphoesterase
> sgr:SGR_6488(187)18475.0938(836)1--     [tr:B1VLC6_STRGG] conserved hypothetical protein
> sho:SHJGH_1840(203)17869.1800(696)3--    hypothetical protein
> shy:SHJG_2075(203)17869.1800(696)3--     [tr:H2JSI5_STRHJ] hypothetical protein
> strf:ASR50_04105(201)17767.2787(643)0--     [tr:A0A0U3QTN6_9ACTN] 3'-phosphoesterase
> srw:TUE45_00853(202)17666.5785(678)0--     [tr:A0A0U5LH00_STRRE] Putative DNA ligase-like protein/MT0965
> strt:A8713_02295(200)18166.3775(652)0--     [tr:A0A1A9IR23_9ACTN] 3'-phosphoesterase
> sci:B446_04035(203)17568.0767(661)1--     [tr:S5VGQ1_STRC3] hypothetical protein
> slc:SL103_21885(208)17962.6750(645)0--     [tr:A0A1D7VP43_9ACTN] 3'-phosphoesterase
> strd:NI25_35090(207)17863.5747(633)0-- K01971  ligD  [tr:A0A0N6ZTH9_9ACTN] 3'-phosphoesterase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salu:DC74_325(225)18165.2738(622)6--     [tr:A0A059VUX7_STRA9] hypothetical protein
> sco:SCO7355(213)17763.3735(619)7--     [tr:Q9KYN0_STRCO] SC9H11.09c; hypothetical protein
> slv:SLIV_02530(213)17763.3733(617)6--     [tr:A0A076LXV2_STRLI] hypothetical protein
> sall:SAZ_02075(212)18563.8731(615)3--    3'-phosphoesterase
> strc:AA958_32855(223)17562.3720(614)8--     [tr:A0A0F7ND98_9ACTN] 3'-phosphoesterase
> sls:SLINC_0374(198)17862.9719(614)0-- K01971  ligD  [tr:A0A1B1M1T8_STRLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_5553(311)17962.6717(606)70-- K01971  ligD  [tr:A0A0B5EVW2_STRA4] DNA ligase D, 3'-phosphoesterase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_0779(206)17958.1686(578)0--     [tr:A0A0M4DB56_STRPR] 3'-phosphoesterase
> spav:Spa2297_01920(215)18358.5685(570)0--     [tr:A0A191UT22_9ACTN] 3'-phosphoesterase
> sld:T261_7408(213)16061.3661(560)4--    hypothetical protein
> sct:SCAT_5571(199)17657.4648(543)2--     [tr:F8JRQ3_STREN] conserved protein of unknown function
> scy:SCATT_55710(199)17657.4648(544)3--     [tr:F8JRQ3_STREN] hypothetical protein
> dao:Desac_0135(207)17753.7612
0--     [tr:F2NBV5_DESAR] DNA ligase D, 3'-phosphoesterase domain protein
> mema:MMAB1_1769(187)17353.8596
0--     [tr:A0A0X3BLE9_9EURY] lig; DNA ligase (ATP)
> mbg:BN140_1383(187)17453.4578
0--     [tr:I7KCW4_METBM] lig5; DNA ligase (ATP)
> acad:UA74_13145(196)17253.5577
0--    DNA ligase D-like 3'-phosphoesterase domain-containing protein
> acti:UA75_13225(196)17253.5577
0--     [tr:A0A1L7F759_9PSEU] DNA ligase D-like 3'-phosphoesterase domain-containing protein
> mem:Memar_2179(197)17653.4577
0--     [tr:A3CXK2_METMJ] conserved hypothetical protein
> mpg:Theba_0073(200)16851.2574
0--     [tr:I2F1M1_9BACT] DNA ligase D-like 3'-phosphoesterase domain-containing protein
> ngv:CDO52_22150(193)17653.4573(454)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)18050.0558
78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mhi:Mhar_1719(203)18350.8555
0--     [tr:G7WQT4_METH6] DNA ligase D, 3'-phosphoesterase domain protein
> mcj:MCON_0453(170)14953.0551
0--     [tr:F4BWI7_METCG] conserved hypothetical protein
> ahm:TL08_12300(197)16451.2549
0--     [tr:A0A1D8BWT7_9PSEU] DNA ligase D-like 3'-phosphoesterase domain-containing protein
> cdq:BOQ54_10250(846)18452.2549
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_12445(196)17251.7547(435)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_01240(190)16651.2546(254)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_09757(830)17050.6545(29)3-- K01971  ligD  [tr:F0LE72_AGRSH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)17050.6545(441)3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chel:AL346_19410(846)18452.2545
4-- K01971  ligD  [tr:A0A0K2DH57_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbar:AWN76_001565(196)18350.3544(444)0--     [tr:A0A1V0DAA9_9BACT] DNA ligase
> rpha:AMC79_CH00655(836)16851.8543(21)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)17949.2543(51)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)17051.8541(24)6-- K01971  ligD  [tr:B3PPH4_RHIE6] probable ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu4632(771)17251.7540(25)5-- K01971  ligD  [tr:A9CGX3_AGRFC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_1804(202)16948.5540(130)0--     [tr:A0A1L7I4I2_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD
> ata:AWN88_02590(830)17050.6536(33)0-- K01971  ligD  [tr:A0A0X8IV37_RHIRD] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)17848.9536
1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)17848.9536
1-- K01971  ligD  [tr:B6JFK1_OLICO] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)17848.9536
1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> esj:SJ05684_c27600(864)17948.0535(76)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)17547.4533
1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_3982(837)18747.1533()7-- K01971  ligD  [tr:A5VDG1_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> same:SAMCFNEI73_pB0496(946)17646.6529(24)0-- K01971  ligD  [tr:A0A1L3LUE4_9RHIZ] ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphp:LH20_17000(837)18448.4528(417)0-- K01971  ligD  [tr:A0A0M4D143_SPHS1] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12930(197)17648.9527
0--     [tr:A0A099D4R7_9ACTN] DNA ligase
> rei:IE4771_PD00652(878)17646.0527
6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)17646.0527
5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_27290(850)17749.2527(13)0-- K01971  ligD  [tr:A0A1A9GBZ5_9RHIZ] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sino:SS05631_b52860(878)17647.2525(35)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssan:NX02_27130(831)16949.7525(48)6-- K01971  ligD  [tr:W0AKE6_9SPHN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0935(789)18147.5524(422)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)17049.4524
5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sinb:SIDU_07840(829)17151.5523()0-- K01971  ligD  [tr:A0A1L5BNB0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)17151.5523()3-- K01971  ligD  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphq:BWQ93_13790(834)18048.9523
0-- K01971  ligD  [tr:A0A1P8WZE4_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> syb:TZ53_20775(831)17150.9523()3-- K01971  ligD  [tr:A0A0C5XXI0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> btei:WS51_27065(938)19047.4522()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)18144.2522
8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)18245.1522(26)6-- K01971  ligD  [tr:C6B636_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aak:AA2016_6337(865)16850.6521(80)0-- K01971  ligD  [tr:A0A142MFW3_AMIAI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14700(857)16850.0521(68)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)17050.6521
5-- K01971  ligD  [tr:D8NY76_RALSL] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)18147.5520
245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_14840(541)18148.6520(1)0-- K01971  ligD  [tr:A0A1S0RDM5_ENSAD] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mey:TM49_01330(829)16750.9520()0-- K01971  ligD  [tr:A0A0D5LKF2_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMa0414(556)17646.0520(11)7-- K01971  ligD  [tr:Q930H5_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_a0414(556)17646.0520(11)7-- K01971  ligD  [tr:M4MF20_SINM2] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blas:BSY18_2878(825)19147.1519
0-- K01971  ligD  [tr:A0A1B3N8M4_9SPHN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hmc:HYPMC_2433(559)17947.5519
1-- K01971  ligD  [tr:F8JHK0_HYPSM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)17647.7519(81)9-- K01971  ligD  [tr:A0A0K1QB33_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)18144.2519
6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)17446.0519
7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhn:AMJ98_PD00262(882)18144.2519
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhx:AMK02_PE00262(882)18144.2519
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmed:Mame_02200(830)17648.9518()0-- K01971  ligD  [tr:A0A1U9Z1F8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)18244.5518
8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> six:BSY16_4675(879)17546.3518(415)0-- K01971  ligD  [tr:A0A1B3MJD8_9RHIZ] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splk:AV944_04690(816)17350.9518
0-- K01971  ligD  [tr:A0A1P8PRV3_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_00706(191)17149.1517
0--     [tr:A0A1P8F6F3_9CHLR] DNA ligase D, 3'-phosphoesterase domain-containing protein
> ade:Adeh_0884(726)17847.2516
346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)18343.7516
4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dly:Dehly_0847(191)17247.1516
0--     [tr:D8K0M1_DEHLB] DNA ligase D, 3'-phosphoesterase domain protein
> fla:SY85_09220(907)18646.8516()0-- K01971  ligD  [tr:A0A172TV90_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mno:Mnod_7647(544)17947.5516(411)3-- K01971  ligD  [tr:B8IQT3_METNO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...