GFIT result for T01601

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ssx:SACTE_0551
(186 a.a.)
 
--
 
    [tr:G2NK67_STREK] DNA ligase D, 3'-phosphoesterase domain-containing protein
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> sfa:Sfla_5714(184)18280.21033(923)1--     [tr:E8WEF8_STRFA] DNA ligase D
> strp:F750_0875(184)18280.21033(927)1--     [tr:M9TLW6_9ACTO] ligD; ATP-dependent DNA ligase clustered with Ku protein (EC:6.5.1.1)
> sfi:SFUL_645(217)18276.4961
1--     [tr:N0CKT2_9ACTO] DNA ligase D, 3'-phosphoesterase domain protein
> sgr:SGR_6488(187)18475.0938(836)1--     [tr:B1VLC6_STRGG] hypothetical protein
> sho:SHJGH_1840(203)17869.1800(696)3--    hypothetical protein
> shy:SHJG_2075(203)17869.1800(696)3--     [tr:H2JSI5_STRHJ] hypothetical protein
> sci:B446_04035(203)17568.0767(661)1--     [tr:S5VGQ1_STRCU] hypothetical protein
> salu:DC74_325(225)18165.2738(622)6--     [tr:A0A059VUX7_STRA9] hypothetical protein
> sco:SCO7355(213)17763.3735(619)7--     [tr:Q9KYN0_STRCO] SC9H11.09c; hypothetical protein
> slv:SLIV_02530(213)17763.3733(617)6--     [tr:A0A076LXV2_STRLI] hypothetical protein
> sall:SAZ_02075(212)18563.8731(615)3--    3'-phosphoesterase
> sals:SLNWT_5553(311)17962.6717(606)70-- K01971  ligD  [tr:A0A0B5EVW2_9ACTO] DNA ligase D, 3'-phosphoesterase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_7408(213)16061.3661(560)4--    hypothetical protein
> sct:SCAT_5571(199)17657.4648(543)2--     [tr:F8JRQ3_STREN] hypothetical protein
> scy:SCATT_55710(199)17657.4648(544)3--     [tr:F8JRQ3_STREN] hypothetical protein
> dao:Desac_0135(207)17753.7612
0--     [tr:F2NBV5_DESAR] DNA ligase D, 3'-phosphoesterase domain-containing protein
> mbg:BN140_1383(187)17453.4578
0--     [tr:I7KCW4_METBM] lig5; DNA ligase (ATP) (EC:6.5.1.1)
> mem:Memar_2179(197)17653.4577
0--     [tr:A3CXK2_METMJ] hypothetical protein
> mpg:Theba_0073(200)16851.2574
0--     [tr:I2F1M1_9THEM] DNA ligase D-like 3'-phosphoesterase domain-containing protein
> afw:Anae109_0939(847)18050.0558
78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mhi:Mhar_1719(203)18350.8555
0--     [tr:G7WQT4_METH6] DNA ligase D
> mcj:MCON_0453(170)14953.0551
0--     [tr:F4BWI7_METCG] hypothetical protein
> agr:AGROH133_09757(830)17050.6545(29)3-- K01971  ligD  [tr:F0LE72_AGRSH] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)17050.6545(441)3-- K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c52060(865)17949.2543(51)9-- K01971  ligD  [tr:I3XCX5_RHIFR] ykoU3; ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)17051.8541(24)6-- K01971  ligD  [tr:B3PPH4_RHIE6] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu4632(771)17251.7540(25)5-- K01971  ligD  [tr:A9CGX3_AGRT5] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oca:OCAR_6912(889)17848.9536
1-- K01971  ligD  [tr:B6JFK1_OLICO] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ocg:OCA5_c11710(889)17848.9536
1-- K01971  ligD  [tr:B6JFK1_OLICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oco:OCA4_c11710(889)17848.9536
1-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)17547.4533
1-- K01971  ligD  [tr:E8RPE4_ASTEC] DNA ligase d; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swi:Swit_3982(837)18747.1533()7-- K01971  ligD  [tr:A5VDG1_SPHWW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)17646.0527
6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)17646.0527
5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0935(789)18147.5524(422)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)17049.4524
5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sjp:SJA_C1-12900(829)17151.5523()3-- K01971  ligD  [tr:D4Z0J2_SPHJU] lig; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> syb:TZ53_20775(831)17150.9523()3-- K01971  ligD  [tr:A0A0C5XXI0_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)18144.2522
8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)18245.1522(26)6-- K01971  ligD  [tr:C6B636_RHILS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)17050.6521
5-- K01971  ligD ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)18147.5520
245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mey:TM49_01330(829)16750.9520()0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMa0414(556)17646.0520(11)7-- K01971  ligD  [tr:Q930H5_RHIME] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_a0414(556)17646.0520(11)7-- K01971  ligD  [tr:M4MF20_SINM2] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hmc:HYPMC_2433(559)17947.5519
1-- K01971  ligD  [tr:F8JHK0_HYPSM] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)18144.2519
6-- K01971  ligD  [tr:Q2K0P3_RHIEC] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00617(880)17446.0519
7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)18244.5518
8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0884(726)17847.2516
346-- K01971  ligD  [tr:Q2IPD0_ANADE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)18343.7516
4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dly:Dehly_0847(191)17247.1516
0--     [tr:D8K0M1_DEHLB] DNA ligase D
> mno:Mnod_7647(544)17947.5516(411)3-- K01971  ligD  [tr:B8IQT3_METNO] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)18244.5516
5-- K01971  ligD  [tr:Q1M4N0_RHIL3] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)14455.6516
1-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgy:Sgly_0962(813)18545.9516()0-- K01971  ligD  [tr:F0T2I5_SYNGF] ATP-dependent DNA ligase subunit LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_pLPU83d1032(879)17646.6515(7)13-- K01971  ligD  [tr:W6RMR2_9RHIZ] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphm:G432_04400(849)17348.6515(410)6-- K01971  ligD  [tr:M4SD88_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI_0169(856)17948.6514
4-- K01971  ligD  [tr:A9H268_GLUDA] DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mez:Mtc_2068(165)17050.0514
0--     [tr:H8I7E1_METCZ] DNA ligase D (EC:6.5.1.1)
> smeg:C770_GR4pC0191(878)17646.0514(5)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)18345.4512
4-- K01971  ligD  [tr:B0T3L2_CAUSK] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)17946.4511(70)3-- K01971  ligD  [tr:G9ABJ8_RHIFH] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)18445.1511
5-- K01971  ligD  [tr:A7INJ2_XANP2] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)18246.7510(40)5-- K01971  ligD DNA polymerase LigD polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)17644.9509
7-- K01971  ligD  [tr:B6A397_RHILW] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)18246.7509(1)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)18246.7509(1)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)18246.7509(37)7-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_chr2907(865)18246.7509(1)14-- K01971  ligD  [tr:F7X888_SINMM] probabable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdn:Hden_1070(562)18245.6508
0-- K01971  ligD  [tr:D8JV68_HYPDA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)18245.6508(16)7-- K01971  ligD  [tr:C3MIG9_RHISN] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)17948.0507()7-- K01971  ligD  [tr:B5ZEK4_GLUDA] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)18146.4507(54)5-- K01971  ligD  [tr:A6UCT1_SINMW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)18543.2506
6-- K01971  ligD putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_4181(647)17448.9506
26-- K01971  ligD  [tr:A4FHC5_SACEN] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bid:Bind_2225(213)17347.4505(381)0--     [tr:B2IGT2_BEII9] DNA ligase
> rlu:RLEG12_02295(882)17645.5505
7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nar:Saro_1695(843)17947.5504(401)1-> K01971  ligD  [tr:Q2G7N8_NOVAD] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)18343.2503(400)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)15351.6502()1-- K01971  ligD  [tr:D8IUA8_HERSS] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll9625(883)17545.7502(20)13-- K01971  ligD  [tr:Q98P39_RHILO] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphk:SKP52_18625(835)18447.8502(27)3-- K01971  ligD  [tr:A0A0A7PKR9_9SPHN] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dai:Desaci_2451(813)17245.9501
2-- K01971  ligD  [tr:I4D6H7_DESAJ] ATP-dependent DNA ligase LigD polymerase module, ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)14352.4501()2-- K01971  ligD  [tr:Q6MA42_PARUW] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hdt:HYPDE_32328(578)18345.9500
0-- K01971  ligD  [tr:N0B3Q2_9RHIZ] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mzh:Mzhil_1092(195)16746.7500(400)0--     [tr:F7XLS2_METZD] DNA ligase D
> mop:Mesop_0815(853)18347.5499(67)9-- K01971  ligD  [tr:F7Y8Z8_MESOW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_4189(525)17548.0498(170)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_4139(525)17548.0498(170)10-- K01971  ligD  [tr:G0FQB4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_21335(525)17548.0498(170)10-- K01971  ligD  [tr:G0FQB4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_4139(525)17548.0498(170)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bch:Bcen2424_6483(936)17848.9498()6-- K01971  ligD  [tr:A0KDF0_BURCH] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcn:Bcen_1346(936)17848.9498()4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dti:Desti_0132(536)16847.6498()0--     [tr:I4BZY8_DESTA] DNA ligase D/DNA polymerase LigD
> ssy:SLG_04290(835)17948.0498(398)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)16847.0497()6-- K01971  ligD  [tr:D7A5M0_STAND] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01169(204)18344.8496(38)1--     [tr:C6X5D1_FLAB3] ATP-dependent DNA ligase (EC:6.5.1.1)
> sphi:TS85_18230(810)18046.1496()3-- K01971  ligD  [tr:A0A0C5LJ70_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcm:Bcenmc03_6073(927)18846.8495()6-- K01971  ligD  [tr:B1KAE7_BURCC] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...