GFIT result for T00196

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sth:STH1795
(307 a.a.)
 
--
 
K01971  ligD  [tr:Q67NG3_SYMTH] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> tmr:Tmar_1127(316)29951.81031
4-- K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)30246.0962
0-- K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)29344.7940
0-- K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)28946.4910
0-- K01971  ligD  [tr:F6B6K3_DESCC] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)28846.2891
0-- K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)29946.2887(786)0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)30945.3885(784)0-- K01971  ligD  [tr:A0A0K2SMK4_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)28946.0882
0-- K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)29547.1881(45)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)29943.8877
0-- K01971  ligD  [tr:F6DU47_DESRL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0598(314)29448.0867
0-- K01971  ligD  [tr:B1I253_DESAP] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)28844.1852
0-- K01971  ligD  [tr:A4J601_DESRM] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)28844.4852
0-- K01971  ligD  [tr:D7CNI8_SYNLT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)28847.6851
0-- K01971  ligD  [tr:A5D2W2_PELTS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)29643.6838(734)0-- K01971  ligD  [tr:W0EYS4_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01168(622)30440.8824(43)2-- K01971  ligD  [tr:C6X5D0_FLAB3] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)29744.1820(197)15-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)29242.1807(159)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_6404(646)30140.5807(31)3-- K01971  ligD  [tr:C7PJP8_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_4189(525)29543.1805(149)10-- K01971  ligD  [tr:A0A0H3D8U5_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_4139(525)29543.1805(149)10-- K01971  ligD  [tr:G0FQB4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_21335(525)29543.1805(149)10-- K01971  ligD  [tr:G0FQB4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_4139(525)29543.1805(149)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nth:Nther_0139(306)29343.3804
0-- K01971  ligD  [tr:B2A484_NATTJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_31290(342)29543.4799(145)5--     [tr:A0A0B5IIG3_9ACTN] ATP-dependent DNA ligase
> dfe:Dfer_3085(299)29140.5798(62)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)29842.3794
0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_6395(343)29542.4794(207)4--     [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1)
> sgu:SGLAU_28045(336)29642.6792(178)2--     [tr:A0A089Z6Y7_STRGA] hypothetical protein
> cbal:M667_13175(808)29541.0789
1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)30440.8788
0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_3151(680)29440.5787(272)2-- K01971  ligD  [tr:A0A068NXY8_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sci:B446_30625(347)29641.2781(256)4--     [tr:S5VCP0_STRC3] hypothetical protein
> asl:Aeqsu_3115(807)28940.5776
1-- K01971  ligD  [tr:I3YZY2_AEQSU] ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ace:Acel_1670(527)29540.7772(122)2-- K01971  ligD  [tr:A0LVI2_ACIC1] DNA primase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)28841.7772(57)3-- K01971  ligD  [tr:A0A0G3LZV4_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07257(331)29441.2772(179)0--     [tr:A0A0U5LZG0_STRRE] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1)
> llu:AKJ09_00960(763)29540.7771(172)8-- K01971  ligD  [tr:A0A0K1PLM9_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strm:M444_27905(332)28842.7771(258)3--     [tr:A0A0G3UXE9_9ACTN] ATP-dependent DNA ligase
> chu:CHU_2837(896)29440.1768
4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)29542.0768
1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdx:Psed_4989(683)29941.8768(120)42-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)29540.0765
1-- K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6709(341)29240.8761(195)2--     [tr:Q9XAM1_STRCO] SC4C6.19; hypothetical protein
> slv:SLIV_04965(341)29240.8761(186)2--     [tr:D6EFA3_STRLI] hypothetical protein
> sho:SHJGH_7372(335)29640.2760(137)4--    hypothetical protein
> shy:SHJG_7611(335)29640.2760(137)4--     [tr:H2JQM4_STRHJ] hypothetical protein
> sti:Sthe_0314(301)29040.7760
1-- K01971  ligD  [tr:D1C6Z2_SPHTD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)28840.3759
1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)30138.2758(3)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stre:GZL_01248(337)29442.9758(217)4--     [tr:A0A0A8ECA4_9ACTN] ATP-dependent DNA ligase
> samb:SAM23877_6362(341)29240.4756(181)3--     [tr:A0A0K2B2S8_STRAM] hypothetical protein
> strf:ASR50_30230(337)29540.0756(188)0--     [tr:A0A0U3GEW8_9ACTN] ATP-dependent DNA ligase
> geb:GM18_0111(892)29342.0755
2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_1185(317)29441.5751(78)6-- K01971  ligD  [tr:F4H399_CELFA] DNA primase small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_21600(916)29740.4750
0-- K01971  ligD  [tr:A0A0P0NL85_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sct:SCAT_5514(335)29141.9750(216)8--     [tr:F8JRK1_STREN] conserved protein of unknown function
> scy:SCATT_55170(335)29141.9750(216)8--     [tr:F8JRK1_STREN] hypothetical protein
> sld:T261_0462(331)29640.9749(106)6--     [tr:A0A0D4DEN6_9ACTN] hypothetical protein
> camu:CA2015_1090(810)29540.7748
1-- K01971  ligD  [tr:A0A0H4PQK2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgr:SGR_1023(345)29240.8748(230)1--     [tr:B1VU08_STRGG] conserved hypothetical protein
> gbm:Gbem_0128(871)29441.2747
2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmt:DESME_11390(293)27740.8745
0-- K01971  ligD  [tr:W0EEN1_9FIRM] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scz:ABE83_03945(339)28841.0744(184)0--     [tr:A0A0M3QPA7_9ACTN] ATP-dependent DNA ligase
> src:M271_07565(334)28941.9744(93)10--     [tr:A0A0A0NAI2_9ACTN] ATP-dependent DNA ligase
> sfa:Sfla_0696(336)29340.6743(214)4--     [tr:E8WAH3_STRFA] DNA polymerase LigD, polymerase domain protein
> strp:F750_6168(336)29340.6743(209)4--     [tr:M9U686_9ACTN] ATP-dependent DNA ligase (EC:6.5.1.1)
> nko:Niako_1577(934)29639.5742(22)5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salu:DC74_7354(337)30441.1741(198)5--     [tr:A0A059WIZ0_STRA9] hypothetical protein
> sfi:SFUL_6474(345)28841.3741(144)3--     [tr:N0CZ27_9ACTN] putative eukaryotic-type DNA primase (EC:6.5.1.1)
> phe:Phep_1702(877)30138.9740
1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgb:WQO_30490(336)28840.3740(192)0--     [tr:A0A0U3C9T2_STRGL] ATP-dependent DNA ligase
> sall:SAZ_38070(331)29441.8739(196)5--    ATP-dependent DNA ligase
> chy:CHY_0025(293)28739.7737(241)1-- K01971  ligD  [tr:Q3AG37_CARHZ] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssx:SACTE_5877(337)29139.9734(206)2--     [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain protein
> gem:GM21_0109(872)29440.8733
1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_28790(341)29939.8733(157)4--     [tr:A0A0C5G4B6_9ACTN] ATP-dependent DNA ligase
> sdv:BN159_1715(338)29640.2731(182)3--     [tr:K4R0C7_9ACTN] DNA polymerase LigD, polymerase domain-containing protein
> strc:AA958_31990(336)29140.2731(132)1--     [tr:A0A0F7NC67_9ACTN] ATP-dependent DNA ligase
> sbh:SBI_08909(334)29940.5729(182)1--     [tr:D7BZY7_STRBB] hypothetical protein
> svl:Strvi_3580(334)29340.6729(68)9--     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain protein
> sxi:SXIM_50850(338)29341.0729(180)2--     [tr:A0A0F7G1V2_9ACTN] DNA polymerase LigD, polymerase domain protein
> ccx:COCOR_00956(852)28140.6727
7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> zpr:ZPR_3654(811)28940.1727
1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)29636.5726
1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)29736.4726
0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)30637.3725(20)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nca:Noca_2856(455)28241.1724(143)4-- K01971  ligD  [tr:A1SKM3_NOCSJ] DNA primase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_1067(337)29540.7723(156)0--     [tr:A0A0M3QHE0_STRPR] DNA polymerase LigD polymerase subunit
> pcu:pc1833(828)28840.3722
2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)28741.8722
0-- K01971  ligD  [tr:A0A0U5JG24_9CHLA] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_09235(338)29638.5721(119)0--     [tr:A0A0U2WIN2_9ACTN] ATP-dependent DNA ligase
> scb:SCAB_13581(336)29239.7718(110)4--     [tr:C9Z887_STRSW] conserved hypothetical protein
> sen:SACE_4181(647)29539.7715(112)26-- K01971  ligD  [tr:A4FHC5_SACEN] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> opr:Ocepr_0487(299)29939.5714(597)1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hor:Hore_03410(313)28636.7710
0-- K01971  ligD  [tr:B8D1M5_HALOH] DNA polymerase LigD polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sht:KO02_10895(829)29436.1710
1-- K01971  ligD  [tr:A0A088EYC0_9SPHI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfl:Cfla_0817(522)29938.8707(46)6-- K01971  ligD  [tr:D5UJY5_CELFN] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbgw:UT28_C0001G0604(308)29137.1705
0-- K01971  ligD  [tr:A0A0G4B481_9BACT] ATP-dependent DNA ligase, DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mio:AOA12_04270(342)30635.9698(598)0--     [tr:A0A0N7I3F3_9MICO] ATP-dependent DNA ligase
... ... ...