GFIT result for T00504

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

stp:Strop_3968
(312 a.a.)
 
--
 
K01971  ligD  [tr:A4XBU1_SALTO] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> saq:Sare_4352(313)31187.11886(1476)12<> K01971  ligD  [tr:A8M566_SALAI] DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mil:ML5_0458(319)31175.21625(1190)18<> K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mau:Micau_0484(319)31174.91616(1172)8<> K01971  ligD  [tr:D9T7L9_MICAI] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vma:VAB18032_06515(302)29976.61592(1190)11<> K01971  ligD  [tr:F4FDR4_VERMA] DNA polymerase LigD ligase subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ams:AMIS_3570(314)31264.71361(945)10<> K01971  ligD  [tr:I0GXU0_ACTM4] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afs:AFR_02060(317)31663.31327(552)10<> K01971  ligD  [tr:U5VST6_9ACTN] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> actn:L083_0501(309)30861.71249(461)11<> K01971  ligD  [tr:R4L9R0_9ACTN] DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ase:ACPL_520(304)30563.01244(880)13<> K01971  ligD  [tr:G8SB37_ACTS5] DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfi:Celf_0800(491)31249.7944(586)13-- K01971  ligD  [tr:F4H018_CELFA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jte:ASJ30_12690(311)30848.1938(594)0<- K01971  ligD  [tr:A0A1L3MLK8_9MICO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> led:BBK82_36775(480)31549.2932(473)0<> K01971  ligD  [tr:A0A1B2HSK8_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfl:Cfla_1903(311)30851.9928(550)23-> K01971  ligD  [tr:D5UEZ0_CELFN] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ica:Intca_0626(316)31246.5928(558)5<> K01971  ligD  [tr:E6S9Y1_INTC7] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsd:BLASA_3098(323)31150.8923(518)10<> K01971  ligD  [tr:H6RPA9_BLASD] LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbi:Tbis_2338(321)31048.4913(519)3-- K01971  ligD  [tr:D6Y3U5_THEBD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmar:MODMU_2075(489)32050.9908(516)14<> K01971  ligD  [tr:I4EVU7_9ACTN] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cez:CBP52_04755(307)30050.0906(521)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psim:KR76_09220(313)31447.5901(604)2<- K01971  ligD  [tr:A0A0A1DHN7_NOCSI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gob:Gobs_2120(436)31950.2897(448)25<> K01971  ligD  [tr:D2SFQ0_GEOOG] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sna:Snas_2814(358)30245.7865(761)11-> K01971  ligD  [tr:D3Q8B6_STANL] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sesp:BN6_42910(492)31247.8864(311)23<> K01971  ligD  [tr:K0K408_SACES] putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kphy:AOZ06_15230(477)31446.8860(461)0<- K01971  ligD  [tr:A0A0N9I0U0_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_28605(484)31446.2854(286)0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cai:Caci_5248(495)31945.8848(411)9<> K01971  ligD  [tr:C7Q6S2_CATAD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nca:Noca_1235(311)30845.1844(460)6-> K01971  ligD  [tr:A1SG14_NOCSJ] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> req:REQ_26630(323)31545.7844(193)5-- K01971  ligD  [tr:E4WID1_RHOE1] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ndk:I601_2208(315)32045.3843(532)0<> K01971  ligD  [tr:A0A1A9GM09_9ACTN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdx:Psed_4989(683)31645.9843(51)42-- K01971  ligD  [tr:F4CNA3_PSEUX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phh:AFB00_09680(313)30548.5842(299)0-> K01971  ligD  [tr:A0A1B1ZLB0_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> noa:BKM31_27980(334)31044.5837(94)0-- K01971  ligD  [tr:A0A1V0A3I7_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cga:Celgi_1690(310)30347.2834(446)8<> K01971  ligD  [tr:F8A5P6_CELGA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lmoi:VV02_22860(317)31144.4834(435)4<> K01971  ligD  [tr:A0A0K1JMU3_9MICO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psea:WY02_17950(304)31348.2830(430)18-> K01971  ligD  [tr:A0A0M4QAB8_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_22360(384)31445.2825(384)0-- K01971  ligD DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_22835(384)31445.2825(384)0-- K01971  ligD  [tr:A0A1L7FCL6_9PSEU] DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> all:CRK60828(484)31443.0823(212)0<- K01971  ligD  [tr:A0A0H5CSB1_9PSEU] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fri:FraEuI1c_4744(558)32246.6819(456)64-- K01971  ligD  [tr:E3IZG5_FRAIE] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_20405(333)32146.1817(334)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pseq:AD006_04015(312)30547.9812(407)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svi:Svir_34920(477)31344.7811(57)2<- K01971  ligD  [tr:C7MQ31_SACVD] DNA ligase D/DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psee:FRP1_24830(312)30547.9810(405)14-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> satk:SA2016_3491(884)31744.2809(424)0-- K01971  ligD  [tr:A0A127A5H1_9MICC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mix:AB663_003164(800)32046.6802(397)0-- K01971  ligD  [tr:A0A0U4GKT0_9MICO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> roa:Pd630_LPD04033(313)31244.2802(169)8-- K01971  ligD  [tr:W8H0B9_RHOOP] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pecq:AD017_11835(312)30547.5801(396)0-> K01971  ligD  [tr:A0A0P0SC28_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pseh:XF36_23625(304)31246.8800(179)0-> K01971  ligD  [tr:A0A0M3UC91_9PSEU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ars:ADJ73_02900(322)32244.7798(442)5<> K01971  ligD  [tr:A0A0K1F731_9MICO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kfl:Kfla_4705(318)31443.3791(361)4-- K01971  ligD  [tr:D2PZB3_KRIFD] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mim:AKG07_06770(658)32245.0791(388)6-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> micr:BMW26_11320(658)32245.0789(387)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dco:SAMEA4475696_1756(648)30843.5787(438)0-> K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_21455(321)32042.5779(20)9<- K01971  ligD  [tr:A0A093AWJ5_9PSEU] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stre:GZL_02561(310)30845.5778(399)11-- K01971  ligD  [tr:A0A0A8EI44_9ACTN] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sall:SAZ_33260(326)31545.4777(386)25-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aja:AJAP_30105(318)31142.8771(34)6<- K01971  ligD  [tr:A0A075V7J0_9PSEU] Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snr:SNOUR_10910(326)31444.9771(392)0-- K01971  ligD  [tr:A0A1B2GNI5_STRNR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arz:AUT26_01215(839)31443.6770(382)0-> K01971  ligD  [tr:A0A0X4JT67_9MICC] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salu:DC74_6447(326)31545.1768(377)22-- K01971  ligD  [tr:A0A059WGB4_STRA9] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strc:AA958_07435(334)32644.8768(346)9<- K01971  ligD  [tr:A0A0F7N3Y2_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nsr:NS506_05464(316)31643.4766(212)0-- K01971  ligD  [tr:A0A1I9ZC47_9NOCA] DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpy:Y013_03425(322)32142.1766(211)4-- K01971  ligD  [tr:V9XCW0_9NOCA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stsi:A4E84_02040(326)32044.7765(351)0-- K01971  ligD  [tr:A0A143CCE9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mip:AXH82_00625(659)31744.2764(368)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tez:BKM78_10350(328)31745.1763(433)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aau:AAur_0283(851)32342.7761(368)6-> K01971  ligD  [tr:A1R1J1_PAEAT] ATP-dependent DNA ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strd:NI25_35060(326)32045.0761(324)0-- K01971  ligD  [tr:A0A0N6ZSS0_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_1870(318)31142.8760(20)9<- K01971  ligD  [tr:R4T1B8_AMYOR] lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_0862(326)32045.0760(350)22-- K01971  ligD  [tr:A3KJ80_STRAM] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arr:ARUE_c02810(852)32242.5757(359)7-> K01971  ligD  [tr:J7LQT2_9MICC] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nsl:BOX37_27860(319)30943.4757(141)0-- K01971  ligD  [tr:A0A1J0VYM6_9NOCA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssx:SACTE_2357(320)31946.1757(298)7-- K01971  ligD  [tr:G2NHN4_STREK] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_19410(347)31943.3754(351)0-- K01971  ligD  [tr:A0A1D8C0U6_9PSEU] DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_04130(326)32045.6753(350)0-- K01971  ligD  [tr:A0A0U3PXN1_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fal:FRAAL4382(581)31044.2752(345)122-- K01971  ligD  [tr:Q0RHK2_FRAAA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO7345(326)32045.0752(341)15-- K01971  ligD  [tr:Q9KXZ8_STRCO] SC4G10.24c; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_02570(326)32045.0752(339)16-- K01971  ligD  [tr:D6EX39_STRLI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strt:A8713_02310(327)31347.0750(325)0-- K01971  ligD  [tr:A0A1A9J658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_5252(333)31342.5748(265)9-- K01971  ligD  [tr:A0A076MWU0_AMYME] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgb:WQO_00280(311)30745.9748(292)0-- K01971  ligD  [tr:A0A0U3B2E8_STRGL] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_65450(326)32044.7748(334)0-- K01971  ligD  [tr:A0A0F7VZM1_9ACTN] sle_65450; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_01705(326)32044.7747(338)11-- K01971  ligD  [tr:A0A0C5FVF9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfa:Sfla_4021(324)32244.7745(320)14-- K01971  ligD  [tr:E8W6T0_STRFA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strp:F750_2702(324)31844.7744(319)14-- K01971  ligD  [tr:M9TPN1_9ACTN] ligD; ATP-dependent DNA ligase clustered with Ku protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scz:ABE83_34900(310)30744.3743(315)0-- K01971  ligD  [tr:A0A0M4ECV1_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1796(327)31442.0743(382)7-- K01971  ligD  [tr:A0A0D4DI33_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_0407(326)32045.9741(351)0-- K01971  ligD  [tr:A0A1B1M1U6_STRLN] putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tfl:RPIT_00740(322)31041.0741(373)0-- K01971  ligD  [tr:A0A1Q2CBN9_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agy:ATC03_01400(835)31644.0739(389)0-> K01971  ligD  [tr:A0A191WBP4_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sci:B446_04080(327)32144.9736(298)19-- K01971  ligD  [tr:S5UX75_STRC3] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_00866(329)32445.7736(316)0-- K01971  ligD  [tr:A0A0U5GY57_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmh:VO01_09615(836)31942.9731(602)13-> K01971  ligD  [tr:A0A0D5CI80_9MICO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_01950(326)32044.1730(247)0-- K01971  ligD  [tr:A0A191UT33_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmc:CMN_02036(834)31643.0728(615)9-> K01971  ligD  [tr:M5BA09_9MICO] ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aer:AERYTH_15445(869)32045.3727(334)0-> K01971  ligD  [tr:A0A0U3TKF8_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_02470(326)31345.7727(296)17-- K01971  ligD  [tr:A0A089WYK1_STRGA] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmi:CMM_2074(832)31942.6726(590)10-> K01971  ligD  [tr:A5CSR6_CLAM3] conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_41235(337)32043.8726(307)0-- K01971  ligD  [tr:A0A0U3NMP2_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mph:MLP_04810(812)30943.0722(323)6-- K01971  ligD  [tr:F5XJZ9_MICPN] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sdv:BN159_8336(318)31244.2722(303)14-- K01971  ligD  [tr:K4RGZ3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cry:B7495_07570(833)31641.8719(362)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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