GFIT result for T00412

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sus:Acid_5076
(304 a.a.)
 
--
 
K01971  ligD  [tr:Q01WD4_SOLUE] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> dgi:Desgi_1819(317)28440.5830
0-> K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)29343.3821(87)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)27943.4820
0-> K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0250(297)28642.7806()0-> K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)30238.7793()1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28643.0786()0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_6404(646)29438.1783(5)3-- K01971  ligD  [tr:C7PJP8_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)28541.1781()0-> K01971  ligD  [tr:A5D2W2_PELTS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)29041.0780(32)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)29639.2771()0-- K01971  ligD  [tr:F6DU47_DESRL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strm:M444_27905(332)27942.7770(199)3->     [tr:A0A0G3UXE9_9ACTN] ATP-dependent DNA ligase
> nso:NIASO_02455(845)30639.5765()0-- K01971  ligD  [tr:W0EYS4_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)29641.9763()0-- K01971  ligD  [tr:F6B6K3_DESCC] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)28940.1762()0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_0365(902)30138.5760(16)2-- K01971  ligD  [tr:C6VYF5_DYAFD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)27840.6760()0-- K01971  ligD  [tr:A4J601_DESRM] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)30037.7759()1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)28640.2758()0-> K01971  ligD  [tr:D7CNI8_SYNLT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)29240.4756(42)3-- K01971  ligD  [tr:A0A0G3LZV4_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_3151(680)30039.0756(194)2-- K01971  ligD  [tr:A0A068NXY8_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01168(622)29738.4755(5)2-- K01971  ligD  [tr:C6X5D0_FLAB3] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)30243.0755()1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0598(314)28941.2752
0-- K01971  ligD  [tr:B1I253_DESAP] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_4922(684)29439.5750(89)2-- K01971  ligD  [tr:G8T7C6_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mab:MAB_4341(409)29139.9749(141)2--    hypothetical protein
> mabb:MASS_4407(449)29140.2748(147)3--     [tr:R4USS5_9MYCO] hypothetical protein
> mabl:MMASJCM_4443(409)29140.2748(147)3--    ATP-dependent DNA ligase
> mabo:NF82_21750(394)28840.3748(140)2--    DNA polymerase
> may:LA62_22060(394)28840.3748(140)2--    DNA polymerase
> maz:LA61_21955(394)28840.3748(140)2--    DNA polymerase
> mmv:MYCMA_2406(449)29140.2748(147)3--    DNA polymerase LigD
> sbh:SBI_08909(334)29642.6748(145)1->     [tr:D7BZY7_STRBB] hypothetical protein
> mak:LH56_02430(394)28840.6747(146)3--    DNA polymerase
> myc:NF90_02480(394)28840.6747(146)3--    DNA polymerase
> mys:NF92_02480(394)28840.6747(146)3--    DNA polymerase
> mrh:MycrhN_1435(411)29740.4746(113)4--     [tr:G8RGT7_MYCRN] putative DNA primase
> pnl:PNK_2195(623)28942.2746()0-- K01971  ligD  [tr:A0A0U5JG24_9CHLA] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)30037.3745()0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1124(303)29037.2743()0-> K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmr:Tmar_1127(316)29538.0743
4-> K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aau:AAur_2008(414)28641.6740(159)3-- K01971  ligD  [tr:A1R691_ARTAT] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arr:ARUE_c21610(414)28641.6740(186)5-- K01971  ligD  [tr:J7LNU1_9MICC] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)28538.6738()0--    DNA ligase D
> sle:sle_11170(341)28041.8737(114)0->     [tr:A0A0F7VLQ2_9ACTN] sle_11170; Probable ATP-dependent DNA ligase ykoU
> afw:Anae109_2830(427)28642.3736(55)20--     [tr:A7HE84_ANADF] DNA primase small subunit
> mcb:Mycch_0320(412)29041.0735(108)5--     [tr:I4BCY7_MYCCN] putative DNA primase
> puf:UFO1_2620(306)28339.2735
0-- K01971  ligD  [tr:A0A075KIK1_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_07565(334)29540.7735(136)10->     [tr:A0A0A0NAI2_9ACTN] ATP-dependent DNA ligase
> art:Arth_3426(414)28640.9734(167)5--     [tr:A0K0I1_ARTS2] conserved hypothetical protein
> bbgw:UT28_C0001G0604(308)30338.0734()0-> K01971  ligD  [tr:A0A0G4B481_9BACT] ATP-dependent DNA ligase, DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_28790(341)28041.8734(120)4->     [tr:A0A0C5G4B6_9ACTN] ATP-dependent DNA ligase
> sxi:SXIM_50850(338)29541.4733(124)2->     [tr:A0A0F7G1V2_9ACTN] DNA polymerase LigD, polymerase domain protein
> acp:A2cp1_1020(313)30638.2732(158)3-- K01971  ligD  [tr:B8JF14_ANAD2] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_00265(411)28541.8732(107)5--     [tr:L0IMJ8_9MYCO] putative DNA primase
> gfo:GFO_0300(802)29738.0731()0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> apn:Asphe3_38430(414)28641.3730(78)2-- K01971  ligD  [tr:F0M977_PSEPM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psul:AU252_22475(414)28641.3730(157)0--     [tr:A0A0U3QA04_9MICC] DNA polymerase
> sct:SCAT_5514(335)28340.3730(215)8->     [tr:F8JRK1_STREN] conserved protein of unknown function
> scy:SCATT_55170(335)28340.3730(211)8->     [tr:F8JRK1_STREN] hypothetical protein
> mts:MTES_0792(409)28742.2729(160)3--     [tr:E8NDT0_MICTS] predicted eukaryotic-type DNA primase
> asl:Aeqsu_3115(807)27639.5727()1-- K01971  ligD  [tr:I3YZY2_AEQSU] ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_6395(343)29339.6727(95)4->     [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1)
> svl:Strvi_3580(334)28041.4725(122)9->     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain protein
> mvq:MYVA_0367(411)28440.1722(99)0--    hypothetical protein
> zpr:ZPR_3654(811)27441.2722()1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mphl:MPHLCCUG_04774(411)28939.4721(65)0--    Putative DNA ligase-like protein
> pcu:pc1833(828)28740.4721()2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rta:Rta_06820(410)28541.1719(252)2--     [tr:F5XWZ9_RAMTT] eukaryotic-type DNA primase-like protein
> salu:DC74_7354(337)27940.9718(108)5->     [tr:A0A059WIZ0_STRA9] hypothetical protein
> scx:AS200_09235(338)28040.0717(142)0->     [tr:A0A0U2WIN2_9ACTN] ATP-dependent DNA ligase
> ach:Achl_3206(414)28442.3716(158)2--     [tr:B8HFX4_PSECP] DNA polymerase LigD, polymerase domain protein
> ade:Adeh_0962(313)30739.1716(148)5-- K01971  ligD  [tr:Q2IPK4_ANADE] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sall:SAZ_38070(331)27940.9716(106)5->    ATP-dependent DNA ligase
> fjo:Fjoh_3303(855)29337.9715()1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mva:Mvan_0396(412)27640.6713(99)4--     [tr:A1T244_MYCVP] conserved hypothetical protein
> sld:T261_0462(331)27940.1713(120)6->     [tr:A0A0D4DEN6_9ACTN] hypothetical protein
> spri:SPRI_1067(337)27940.5713(84)0->     [tr:A0A0M3QHE0_STRPR] DNA polymerase LigD polymerase subunit
> ank:AnaeK_1023(313)30738.8711(129)5-- K01971  ligD  [tr:B4UFZ0_ANASK] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjl:Mjls_0349(434)29539.7711(98)3--    DNA primase, small subunit
> mkm:Mkms_0370(434)29539.7711(98)3--     [tr:A1U9S9_MYCSK] conserved hypothetical protein
> mmc:Mmcs_0360(434)29539.7711(98)3--    conserved hypothetical protein
> mne:D174_03730(406)29540.3709(117)3--     [tr:V5X5L6_MYCNE] DNA polymerase
> mye:AB431_02390(397)25942.9709(92)2--     [tr:A0A0G3IG13_9MYCO] DNA polymerase
> samb:SAM23877_6362(341)28040.0709(94)3->     [tr:A0A0K2B2S8_STRAM] hypothetical protein
> strf:ASR50_30230(337)28138.1709(128)0->     [tr:A0A0U3GEW8_9ACTN] ATP-dependent DNA ligase
> aba:Acid345_2863(352)30736.5708
0-- K01971  ligD  [tr:Q1IMN6_KORVE] DNA primase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)29437.8708()4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> age:AA314_01083(354)27841.4707(84)2->     [tr:A0A0G2ZHC7_9DELT] ATP-dependent DNA ligase
> mft:XA26_05350(411)28839.9705(77)0--     [tr:A0A0N9Y103_MYCFO] ATP-dependent DNA ligase (EC:6.5.1.1)
> sdv:BN159_1715(338)29439.8705(96)3->     [tr:K4R0C7_9ACTN] DNA polymerase LigD, polymerase domain-containing protein
> sth:STH1795(307)28939.8705(602)1-- K01971  ligD  [tr:Q67NG3_SYMTH] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mgo:AFA91_02625(413)28340.6703(76)3--     [tr:A0A0K0XFA7_9MYCO] DNA polymerase
> myv:G155_02955(409)28839.9703(75)3--     [tr:A0A0A1FWS3_9MYCO] DNA polymerase
> gbm:Gbem_0128(871)30240.1702()2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stre:GZL_01248(337)27939.4702(90)4->     [tr:A0A0A8ECA4_9ACTN] ATP-dependent DNA ligase
> abac:LuPra_01084(440)28539.6701(9)0->     [tr:A0A143PHA2_9BACT] Putative DNA ligase-like protein
> mgi:Mflv_0342(412)28039.3700(77)3--     [tr:A4T0S7_MYCGI] DNA primase, small subunit
> msp:Mspyr1_04160(412)28039.3700(77)3--     [tr:E6TLV6_MYCSR] predicted DNA primase
> ssx:SACTE_5877(337)27939.1700(96)2->     [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain protein
> hor:Hore_03410(313)29135.1699()0-> K01971  ligD  [tr:B8D1M5_HALOH] DNA polymerase LigD polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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