GFIT result for T00412

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

sus:Acid_6821
(322 a.a.)
 
--
 
    [tr:Q01RI2_SOLUE] ATP dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ote:Oter_4309(603)31846.2873(504)5-- K01971  ligD  [tr:B1ZP92_OPITP] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)32038.4668(561)1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)33138.7665(558)2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nko:Niako_1577(934)31738.2661(78)5-- K01971  ligD  [tr:G8T6U3_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)31637.3659(93)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)32337.5656(53)6-- K01971  ligD  [tr:C6B636_RHILS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)31437.3656(90)9-- K01971  ligD DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)31437.3653(87)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)31437.3652(86)15-- K01971  ligD  [tr:F7XBX2_SINMM] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)32241.0650(337)19-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_3242(657)31736.6649(56)3-- K01971  ligD  [tr:C7PQT6_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)31437.6648(180)6-- K01971  ligD  [tr:A0A060IHZ0_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)31437.6648(246)5-- K01971  ligD  [tr:A0A0A8GNR5_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bid:Bind_0382(644)32139.6647(444)2-- K01971  ligD  [tr:B2IE11_BEII9] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)32240.7643(321)23-- K01971  ligD ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_00335(899)32035.6643(13)4-- K01971  ligD  [tr:A0A0G3LY28_9FLAO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)31637.0643(204)5-- K01971  ligD  [tr:Q1M4N0_RHIL3] putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00252(882)31436.9642(74)6-- K01971  ligD  [tr:Q2K0P3_RHIEC] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcm:AY601_3223(882)31334.8641(321)0-- K01971  ligD  [tr:A0A127VFJ5_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00265(882)31436.9641(72)8-- K01971  ligD  [tr:S5SBQ2_RHIET] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)31736.6641(397)10-- K01971  ligD  [tr:E3HZV9_RHOVT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)31535.6640(352)0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)32436.1640(205)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)31336.7639(419)4-- K01971  ligD  [tr:B0T3L2_CAUSK] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_31130(878)31536.8638(108)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)32240.1637(315)35-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_00895(896)31234.3637(165)4-- K01971  ligD  [tr:C6X4K9_FLAB3] ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)31436.0637(178)7-- K01971  ligD  [tr:B6A397_RHILW] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)32837.2632()1-- K01971  ligD  [tr:A9HXI5_BORPD] unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)32335.6630(154)8-- K01971  ligD  [tr:W0IMY4_RHILT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scy:SCATT_54560(327)33939.2630(268)4--     [tr:G8WVS0_STREN] DNA polymerase LigD ligase subunit
> sct:SCAT_5457(313)33138.7629(267)3--    ligD; DNA polymerase LigD, ligase domain (EC:6.5.1.1)
> dfe:Dfer_0365(902)31635.4628(393)2-- K01971  ligD  [tr:C6VYF5_DYAFD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_PA0000197(882)31436.3627(73)6-- K01971  ligD  [tr:B3Q1I5_RHIE6] putative ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)33737.7625(315)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_01435(900)32633.4623(22)0-- K01971  ligD  [tr:A0A0S3FNK5_9FLAO] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> deq:XM25_14700(857)31636.4623(257)3-- K01971  ligD  [tr:A0A0K0TZ58_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)29637.8618(325)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)32635.0617(330)1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)31237.2617()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_5204(314)32340.2616(179)6--     [tr:A0A0H3D9J5_AMYMU] lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)32340.2616(179)6--     [tr:G0FQR1_AMYMS] lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)32340.2616(179)6--     [tr:G0FQR1_AMYMS] ATP-dependent DNA ligase
> amz:B737_5142(314)32340.2616(179)6--    lig; ATP-dependent DNA ligase
> fgi:OP10G_3151(680)32034.7616(184)2-- K01971  ligD  [tr:A0A068NXY8_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu5055(884)32234.5615(78)6-- K01971  ligD  [tr:Q7D410_AGRFC] ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)31237.5615(294)0-- K01971  ligD  [tr:A0A0U5JG24_9CHLA] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)33036.1612()1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)31836.8611()2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgy:Sgly_0962(813)31435.4611()0-- K01971  ligD  [tr:F0T2I5_SYNGF] ATP-dependent DNA ligase LigD polymerase module;ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)32034.1609(382)4-- K01971  ligD  [tr:B9K4A7_AGRVS] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssy:SLG_04290(835)30436.5608(255)2-- K01971  ligD  [tr:G2IL41_9SPHN] putative DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_5345(337)32439.8608(174)8--     [tr:G2NUQ9_STRVO] DNA polymerase LigD, ligase domain protein
> rga:RGR602_PC00617(880)32035.6606(152)7-- K01971  ligD  [tr:A0A0B4XC15_9RHIZ] ATP-dependent DNA ligase protein (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)31434.7606(91)6-- K01971  ligD  [tr:U4QIX7_9RHIZ] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pla:Plav_2977(845)31834.6605()0-- K01971  ligD  [tr:A7HXF1_PARL1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_04490(883)31434.4604(79)0-- K01971  ligD  [tr:A0A109VSJ1_RHIRD] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)32137.4604(234)3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_21600(916)31333.2603(5)0-- K01971  ligD  [tr:A0A0P0NL85_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nwi:Nwi_0353(913)30336.0602(392)3-- K01971  ligD  [tr:Q3SVS1_NITWN] ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)29638.5601(342)10-- K01971  ligD  [tr:A1W8V8_ACISJ] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)31834.0601()0-- K01971  ligD  [tr:C8WIH5_EGGLE] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)31335.1600(347)5-- K01971  ligD  [tr:D5VM30_CAUST] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stax:MC45_16320(821)32035.0600(350)4-- K01971  ligD  [tr:A0A097EJC6_9SPHN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_4877(903)31534.9599(64)0-- K01971  ligD  [tr:A0A160UCT5_BRASZ] ATPdependent DNA ligase EC 6511 clustered with Ku protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14150(332)32236.6599(156)4--     [tr:X8CFR3_MYCIT] ATP-dependent DNA ligase
> mir:OCQ_30550(332)32236.6599(156)3--    DNA polymerase LigD ligase subunit (EC:6.5.1.1)
> mit:OCO_29890(332)32236.6599(156)3--    DNA polymerase LigD ligase subunit (EC:6.5.1.1)
> mmm:W7S_14830(332)32236.6599(156)3--     [tr:I2AF57_9MYCO] DNA polymerase LigD ligase subunit
> shg:Sph21_2578(905)32035.0598(310)1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)32636.5597()0-- K01971  ligD  [tr:W0EYS4_9SPHI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psb:Psyr_3245(866)31936.7596(391)3-- K01971  ligD  [tr:Q4ZRE5_PSEU2] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsk:RSKD131_0994(877)33036.7596(279)10-- K01971  ligD  [tr:B9KRR2_RHOSK] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmy:Pmen_3217(837)32836.3595(367)4-- K01971  ligD  [tr:A4XXA4_PSEMY] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)31334.8595(349)1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12770(335)32635.6594()0-- K01971  ligD  [tr:A0A0S2TFK7_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rge:RGE_26430(851)32636.2593(306)14-- K01971  ligD  [tr:I0HSJ5_RUBGI] ligD; ATP-dependent DNA ligase LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)32234.5593()0-- K01971  ligD  [tr:A0A098GIL1_TATMI] ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)32537.8592(21)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mey:TM49_01330(829)31735.3592()0-- K01971  ligD  [tr:A0A0D5LKF2_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)31534.9591()1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbm:CL52_09565(845)31937.0591(404)4-- K01971  ligD ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bph:Bphy_4772(651)32136.4590(30)6-- K01971  ligD  [tr:B2JRW2_PARP8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mav:MAV_3148(332)32236.3590(136)3--     [tr:A0A0H3A2H7_MYCA1] ligD; DNA polymerase LigD, ligase domain (EC:6.5.1.1)
> mava:LA64_14300(332)32236.3590(137)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)32236.3590(137)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)32236.3590(137)3--    ATP-dependent DNA ligase
> sfd:USDA257_c16580(850)32036.2589(37)8-- K01971  ligD  [tr:I3X2Z1_RHIFR] ykoU2; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lok:Loa_02405(334)32436.1588(11)1--     [tr:W0BH41_9GAMM] DNA polymerase LigD, ligase domain protein (EC:6.5.1.1)
> pch:EY04_14070(844)33035.5588()1-- K01971  ligD  [tr:A0A0E1EA19_9PSED] ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)32134.3587(123)10-- K01971  ligD  [tr:W8I8X7_ENSAD] putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gur:Gura_3452(534)31738.5587()0-- K01971  ligD  [tr:A5G740_GEOUR] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)31733.8586(370)5-- K01971  ligD  [tr:A7INJ2_XANP2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aak:AA2016_6337(865)32036.2585(130)0-- K01971  ligD  [tr:A0A142MFW3_AMIAI] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aay:WYH_02746(840)33035.2585(270)1-- K01971  ligD  [tr:A0A0F7KX49_9SPHN] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mao:MAP4_2518(332)32236.0585(138)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)32236.0585(138)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)32236.0585(138)3--    ATP-dependent DNA ligase
> mia:OCU_29800(332)30537.0585(142)3--     [tr:H8IQK0_MYCIA] DNA polymerase LigD ligase subunit (EC:6.5.1.1)
> mpa:MAP_1329c(354)32236.0585(138)0--     [tr:Q740M1_MYCPA] hypothetical protein
... ... ...