GFIT result for T01602

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

svl:Strvi_0339
(312 a.a.)
 
--
 
K01971  ligD  [tr:G2PB75_STRVO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> src:M271_24695(312)31292.92014(1450)7<> K01971  ligD  [tr:A0A0A0NK22_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sauo:BV401_23550(314)31290.41939(1401)0<> K01971  ligD  [tr:A0A1P8XXT5_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)30566.21336(705)5-- K01971  ligD  [tr:A0A0B5I658_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)30067.01324(688)9-- K01971  ligD  [tr:F2R8H7_STRVP] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_13250(317)30265.61321(742)0-- K01971  ligD  [tr:A0A1D7VK40_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7216(311)30762.51261(670)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_7456(311)30762.51261(670)12-- K01971  ligD  [tr:H2JMG2_STRHJ] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stsi:A4E84_33405(319)31062.61250(673)0-- K01971  ligD  [tr:A0A143CAJ2_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(310)30562.01244(677)2-- K01971  ligD  [tr:A0A0D4DGP5_9ACTN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07099(311)30761.21243(654)0-- K01971  ligD  [tr:A0A0U5LT13_STRRE] Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbar:AWN76_001560(303)29859.41203(1092)0-- K01971  ligD  [tr:A0A1V0DAF0_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)30860.41194(609)0-- K01971  ligD  [tr:A0A0M5IV58_STRPR] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)30359.71187(605)4-- K01971  ligD  [tr:A0A089XJS0_STRGA] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_27050(309)30461.21187(606)0-- K01971  ligD  [tr:A0A191V5X6_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)30460.51174(595)0-- K01971  ligD  [tr:A0A0U3RG51_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strt:A8713_26490(307)30359.41169(594)0-- K01971  ligD  [tr:A0A1A9J3A1_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)30160.81167(569)0-- K01971  ligD  [tr:A0A0U3P0H3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssia:A7J05_06180(326)32256.51166(585)0-- K01971  ligD  [tr:A0A1P8TCL5_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_6916(312)30460.21163(575)0-- K01971  ligD  [tr:A0A1B1MKK3_STRLN] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)30759.61158(568)15-- K01971  ligD  [tr:A0A0K2B2C0_STRAM] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)30560.01158(583)10-- K01971  ligD  [tr:Q9ZC15_STRCO] SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)30560.01155(580)6-- K01971  ligD  [tr:A0A076LZN4_STRLI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snw:BBN63_03335(380)29760.91155(558)0-- K01971  ligD  [tr:A0A1U9QMK8_STRNV] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)30159.11140(583)8-- K01971  ligD  [tr:A0A0B5EW78_STRA4] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_12820(311)30758.61139(533)0-- K01971  ligD  [tr:A0A0F7VLX0_9ACTN] sle_12820; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strd:NI25_05905(304)30558.41132(536)0-- K01971  ligD  [tr:A0A0N6W6F3_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)30458.21121(508)7-- K01971  ligD  [tr:A0A0C5G7H9_9ACTN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_4488(313)30656.91099(529)17-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)32853.01054(518)24-- K01971  ligD  [tr:C9ZET8_STRSW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)29254.5998(476)3-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)28454.6996
0-- K01971  ligD  [tr:D1Z0H5_METPS] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)29351.5983(438)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)29253.8982(463)4-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)29253.8982(462)4-- K01971  ligD  [tr:A0A1X2L0S2_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)29253.8982(462)3-- K01971  ligD  [tr:I2AF58_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_1807(302)29749.2981(431)0-- K01971  ligD  [tr:A0A1L7I4L1_9FLAO] ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)29253.8979(456)5-- K01971  ligD  [tr:H8IQK1_MYCIA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_13685(296)29253.1973(445)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)29253.1970(450)3-- K01971  ligD  [tr:S4ZH15_9MYCO] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15580(296)29253.1967(446)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12940(303)30250.0961(30)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)30447.4917
0-- K01971  ligD  [tr:A0A0S2TFP3_9GAMM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)29747.5911
0-- K01971  ligD  [tr:Q0W3B3_METAR] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hbe:BEI_0346(309)29549.5892(789)0-- K01971  ligD ligD1; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)28947.4888
0-- K01971  ligD  [tr:A0A0F7CTE9_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_01230(291)28946.4879(262)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)30045.3872(352)1-- K01971  ligD  [tr:A5ETW7_BRASB] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngv:CDO52_22140(303)30545.6866(763)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_3394(292)28047.5855(285)3--     [tr:A4FF44_SACEN] ATP-dependent DNA ligase
> amd:AMED_5203(287)29246.2837(168)11-- K01971  ligD  [tr:A0A0H3D8J2_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5141(287)29246.2837(168)11-- K01971  ligD  [tr:G0FQR0_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)29246.2837(168)11-- K01971  ligD  [tr:G0FQR0_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)29246.2837(168)11-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)29845.3814(318)3-- K01971  ligD  [tr:F5Z238_MYCSD] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)29043.4796(237)0-- K01971  ligD  [tr:A0A143PN04_9BACT] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlt:VC82_553(323)29342.0787
0-- K01971  ligD  [tr:A0A0D5YPS4_9FLAO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_1370(299)29846.0782(316)0-- K01971  ligD  [tr:A0A1D7W274_BRELN] ATP-dependent DNA ligase LigC; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)29038.6775(674)0-- K01971  ligD  [tr:F8E8Z5_FLESM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_01625(302)29241.4761
0-- K01971  ligD  [tr:A0A1P8F904_9CHLR] ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_3248(328)29442.5752(59)7-- K01971  ligD  [tr:A7HFE5_ANADF] DNA polymerase LigD polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_167(313)29438.1740
0-- K01971  ligD  [tr:V6DGX3_9DELT] ykoU; Eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_13140(304)30242.4729(240)0-- K01971  ligD DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_13220(304)30242.4729(238)0-- K01971  ligD  [tr:A0A1L7F726_9PSEU] DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_12440(304)30242.4729(214)0-- K01971  ligD ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_12295(305)29643.6717(242)0-- K01971  ligD  [tr:A0A1D8BWT8_9PSEU] DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nda:Ndas_0258(292)30243.0716(552)6-- K01971  ligD  [tr:D7AUE9_NOCDD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)26542.6716(603)0-- K01971  ligD  [tr:A0A142YAI4_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nal:B005_3125(304)30243.4709(604)1-- K01971  ligD  [tr:J7LBG3_NOCAA] ligD; DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)30038.3687()0-- K01971  ligD  [tr:A0A1W1I2Z9_9BACT] ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sct:SCAT_5514(335)26142.5686(168)8--     [tr:F8JRK1_STREN] conserved protein of unknown function
> scy:SCATT_55170(335)26142.5686(168)8--     [tr:F8JRK1_STREN] hypothetical protein
> scu:SCE1572_09695(786)31137.3678(25)28-- K01971  ligD  [tr:S4XS85_SORCE] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aja:AJAP_24085(335)27542.9676(113)7--     [tr:A0A075UYX2_9PSEU] ATP-dependent DNA ligase
> ksk:KSE_05320(173)17365.3673(370)25-- K01971  ligD  [tr:E4N597_KITSK] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)30237.7672(568)3-- K01971  ligD  [tr:A0A0K2GDN5_9BACT] ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)28237.2670()0-- K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daa:AKL17_3157(812)30142.5665
0-- K01971  ligD  [tr:A0A165SRM4_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)29339.6664(561)0-- K01971  ligD  [tr:A0A0X8HBT1_9GAMM] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoi:AORI_5277(335)27542.2662(96)8--     [tr:R4SZ83_AMYOR] lig; DNA ligase (ATP)
> cmag:CBW24_07195(818)28740.4661
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1795(307)31137.3661()1-- K01971  ligD  [tr:Q67NG3_SYMTH] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)28541.8659(553)0-- K01971  ligD  [tr:A0A0K2SMK4_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ghi:107941224(850)29539.3657
0--     [tr:A0A1U8MTV7_GOSHI] multifunctional non-homologous end joining protein LigD-like
> cdq:BOQ54_10250(846)29140.9655
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmk:MDS_2413(842)31037.7655()2-- K01971  ligD  [tr:F4DU16_PSEMN] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chel:AL346_19410(846)29140.9654
4-- K01971  ligD  [tr:A0A0K2DH57_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)29238.0654()1-- K01971  ligD  [tr:C6XB41_METGS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_16940(898)29538.0654(12)0-- K01971  ligD  [tr:A0A142WYC5_9PLAN] ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbm:TEF_06740(852)32138.3652(546)0-- K01971  ligD  [tr:A0A192IGW8_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thw:BMG03_06005(802)28741.1651(549)0-- K01971  ligD  [tr:A0A1S6ID59_9RHOB] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0932(737)30541.6649(56)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)27835.6647(543)0-- K01971  ligD  [tr:W0EYS4_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> esj:SJ05684_c27600(864)27440.5646(170)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)27037.0646(88)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)27040.4645()0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mey:TM49_01330(829)30938.8644(535)0-- K01971  ligD  [tr:A0A0D5LKF2_9RHIZ] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> alu:BB31_38590(335)27541.8643(79)5--     [tr:A0A093CTH9_9PSEU] ATP-dependent DNA ligase
> tjr:TherJR_1553(301)27638.4642()0-- K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_14840(541)27340.3641(140)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)28239.0641(512)82-- K01971  ligD  [tr:A9GRV1_SORC5] unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
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