GFIT result for T00396

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

swo:Swol_1124
(303 a.a.)
 
--
 
K01971  ligD  [tr:Q0AXX0_SYNWW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> toc:Toce_0250(297)29247.3974
0<- K01971  ligD  [tr:D9S0A8_THEOJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1795(307)29344.7940
1-- K01971  ligD  [tr:Q67NG3_SYMTH] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmr:Tmar_1127(316)30146.2937
4<- K01971  ligD  [tr:E6SKN2_THEM7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1510(300)29445.2920
0<- K01971  ligD  [tr:D7CNI8_SYNLT] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1553(301)29044.1899
0<- K01971  ligD  [tr:D5XFI5_THEPJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dgi:Desgi_1819(317)28842.4887
0<- K01971  ligD  [tr:R4KHZ7_9FIRM] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chu:CHU_2837(896)29244.2886
4-- K01971  ligD  [tr:Q11R79_CYTH3] ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mta:Moth_2082(306)29345.1881(39)1-- K01971  ligD  [tr:Q2RGR4_MOOTA] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dca:Desca_1522(302)29944.1878
0-- K01971  ligD  [tr:F6B6K3_DESCC] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_1986(303)28744.9874
0-- K01971  ligD  [tr:A4J601_DESRM] DNA primase, small subunit; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)29543.7873
0-- K01971  ligD  [tr:F6CIP8_DESK7] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0939(847)29745.5866(218)78-- K01971  ligD  [tr:A7H8V2_ANADF] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nia:A8C56_12060(855)29740.4866
0-- K01971  ligD  [tr:A0A1A9I261_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dru:Desru_1861(304)29245.5865
0-- K01971  ligD  [tr:F6DU47_DESRL] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfo:GFO_0300(802)29941.8865
0-- K01971  ligD  [tr:A0LY41_GRAFK] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nso:NIASO_02455(845)29043.1855
0-- K01971  ligD  [tr:W0EYS4_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asl:Aeqsu_3115(807)29941.5854
1-- K01971  ligD  [tr:I3YZY2_AEQSU] ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)29939.1853
0-- K01971  ligD  [tr:A0A0H4VGU1_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgn:OK18_05350(623)29740.7851(50)3-- K01971  ligD  [tr:A0A0G3LZV4_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)29740.7851(108)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hor:Hore_03410(313)28841.7849
0<- K01971  ligD  [tr:B8D1M5_HALOH] DNA polymerase LigD polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cih:ATE47_13465(629)29740.7848(49)0-- K01971  ligD  [tr:A0A0S3FXQ3_9FLAO] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)29342.3848(16)1-- K01971  ligD  [tr:C6W6G0_DYAFD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psty:BFS30_22300(919)29540.0844(53)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mup:A0256_05625(914)29539.7843
0-- K01971  ligD  [tr:A0A142HPY3_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pth:PTH_1244(323)29542.7843
0<- K01971  ligD  [tr:A5D2W2_PELTS] predicted eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shg:Sph21_2578(905)29639.2840
1-- K01971  ligD  [tr:F4CFH6_SPHS2] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmr:Cycma_1183(808)30141.9839
1-- K01971  ligD  [tr:G0IY51_CYCMS] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0598(314)28545.3839
0-- K01971  ligD  [tr:B1I253_DESAP] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)29540.0837
1-- K01971  ligD  [tr:B9LYX5_GEODF] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_6404(646)28840.3835(41)3-- K01971  ligD  [tr:C7PJP8_CHIPD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fba:FIC_01168(622)30140.9834(7)2-- K01971  ligD  [tr:C6X5D0_FLAB3] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)29841.3827
1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lpil:LIP_2516(323)30640.5820
0<- K01971  ligD  [tr:A0A0K2SMK4_9FIRM] DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nth:Nther_0139(306)30040.3820
0<- K01971  ligD  [tr:B2A484_NATTJ] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbal:M667_13175(808)29838.3818
1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)30040.0817
2-- K01971  ligD  [tr:B5E922_GEOBB] ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)30040.3817
2-- K01971  ligD  [tr:E8WKB5_GEOS8] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcu:pc1833(828)28841.0811
2-- K01971  ligD  [tr:Q6MA42_PARUW] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phe:Phep_1702(877)29538.6808
1-- K01971  ligD  [tr:C6XUR3_PEDHD] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbgw:UT28_C0001G0604(308)29339.9805
0<- K01971  ligD  [tr:A0A0G4B481_9BACT] ATP-dependent DNA ligase, DNA ligase (ATP) (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)30039.7805
1-- K01971  ligD  [tr:C6E8Q6_GEOSM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnl:PNK_2195(623)28441.5802
0-- K01971  ligD  [tr:A0A0U5JG24_9CHLA] putative ATP-dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rti:DC20_13500(303)29936.8801
0-- K01971  ligD  [tr:A0A0P0CYM1_9BACT] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> camu:CA2015_1090(810)29940.1800
1-- K01971  ligD  [tr:A0A0H4PQK2_9BACT] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)29143.0796(224)15-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)30038.0795
0-- K01971  ligD  [tr:A0A172TV90_9BACT] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amd:AMED_4189(525)29939.8794(143)10-- K01971  ligD  [tr:A0A0H3D8U5_AMYMU] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_4139(525)29939.8794(143)10-- K01971  ligD  [tr:G0FQB4_AMYMS] lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_21335(525)29939.8794(143)10-- K01971  ligD  [tr:G0FQB4_AMYMS] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_4139(525)29939.8794(143)10-- K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fgi:OP10G_3151(680)29540.0790(114)2-- K01971  ligD  [tr:A0A068NXY8_9BACT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fjo:Fjoh_3303(855)29541.0790
1-- K01971  ligD  [tr:A5FEP5_FLAJ1] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcm:AY601_3223(882)29737.7781
0-- K01971  ligD  [tr:A0A127VFJ5_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)28938.8779
0-- K01971  ligD  [tr:F8KYR4_PARAV] putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccx:COCOR_00956(852)28144.1775
7--     [tr:H8MLH4_CORCM] ligD; ATP dependent DNA ligase
> nko:Niako_4922(684)29438.1772(0)2-- K01971  ligD  [tr:G8T7C6_NIAKG] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sti:Sthe_0314(301)29838.6766
1-- K01971  ligD  [tr:D1C6Z2_SPHTD] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_07565(334)28538.2765(161)10<-     [tr:A0A0A0NAI2_9ACTN] ATP-dependent DNA ligase
> scn:Solca_1673(810)29739.4762
1-- K01971  ligD  [tr:H8KQK1_SOLCM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_3580(334)29637.5761(143)9--     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain protein
> sen:SACE_4181(647)29937.1758(84)26-- K01971  ligD  [tr:A4FHC5_SACEN] ATP dependent DNA ligase (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> chy:CHY_0025(293)28739.4756(205)1<- K01971  ligD  [tr:Q3AG37_CARHZ] conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strm:M444_27905(332)27537.8754(177)3<-     [tr:A0A0G3UXE9_9ACTN] ATP-dependent DNA ligase
> ank:AnaeK_0932(737)29140.5753(57)245-- K01971  ligD  [tr:B4UF57_ANASK] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_00960(763)29836.6752(131)8-- K01971  ligD  [tr:A0A0K1PLM9_9DELT] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_09235(338)29335.8747(141)0--     [tr:A0A0U2WIN2_9ACTN] ATP-dependent DNA ligase
> acp:A2cp1_0935(789)29139.9746(41)292-- K01971  ligD  [tr:B8JEG0_ANAD2] DNA ligase D, 3'-phosphoesterase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033620(298)27641.7746
0<- K01971  ligD  [tr:A0A075R759_BRELA] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdx:Psed_4989(683)27937.6743(115)42-- K01971  ligD  [tr:F4CNA3_PSEUX] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_21600(916)29237.0741
0-- K01971  ligD  [tr:A0A0P0NL85_9SPHI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_31290(342)29736.0739(105)5--     [tr:A0A0B5IIG3_9ACTN] ATP-dependent DNA ligase
> sci:B446_30625(347)30035.3733(167)4<-     [tr:S5VCP0_STRC3] hypothetical protein
> opr:Ocepr_0487(299)29636.5732
1-- K01971  ligD  [tr:E4U673_OCEP5] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_28045(336)29335.5732(149)2--     [tr:A0A089Z6Y7_STRGA] hypothetical protein
> sbh:SBI_08909(334)29036.6730(151)1<-     [tr:D7BZY7_STRBB] hypothetical protein
> sle:sle_11170(341)30035.3730(152)0--     [tr:A0A0F7VLQ2_9ACTN] sle_11170; Probable ATP-dependent DNA ligase ykoU
> scw:TU94_28790(341)30035.3729(157)4--     [tr:A0A0C5G4B6_9ACTN] ATP-dependent DNA ligase
> sct:SCAT_5514(335)28936.3726(197)8--     [tr:F8JRK1_STREN] conserved protein of unknown function
> scy:SCATT_55170(335)28936.3726(197)8--     [tr:F8JRK1_STREN] hypothetical protein
> msa:Mycsm_03038(295)28838.9725(102)4-- K01971  ligD  [tr:L0IW75_9MYCO] DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psn:Pedsa_1057(822)29735.0725
1-- K01971  ligD  [tr:F0SBI2_PSESL] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7372(335)28036.8725(114)4--    hypothetical protein
> shy:SHJG_7611(335)28036.8725(114)4--     [tr:H2JQM4_STRHJ] hypothetical protein
> sur:STAUR_6997(836)28341.7725(622)8-- K01971  ligD  [tr:Q09E36_STIAD] ligD; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sht:KO02_10895(829)29636.8724
1-- K01971  ligD  [tr:A0A088EYC0_9SPHI] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_6395(343)29734.7724(155)4<-     [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1)
> gta:BCM27_16840(326)28638.8723(173)0--    ATP-dependent DNA ligase
> strf:ASR50_30230(337)28535.4722(115)0--     [tr:A0A0U3GEW8_9ACTN] ATP-dependent DNA ligase
> hoh:Hoch_3330(896)30039.7721(95)65-- K01971  ligD  [tr:D0LUZ1_HALO1] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_13581(336)28635.3719(164)4<-     [tr:C9Z887_STRSW] conserved hypothetical protein
> plv:ERIC2_c03270(301)28040.7718
0<- K01971  ligD  [tr:V9W2K7_9BACL] DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sxi:SXIM_50850(338)28536.5717(126)2--     [tr:A0A0F7G1V2_9ACTN] DNA polymerase LigD, polymerase domain protein
> ssx:SACTE_5877(337)27536.4716(152)2--     [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain protein
> spri:SPRI_1067(337)28534.7715(42)0<-     [tr:A0A0M3QHE0_STRPR] DNA polymerase LigD polymerase subunit
> dec:DCF50_p2127(305)28838.5714
0<- K01971  ligD  [tr:K4L3M4_9FIRM] ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ded:DHBDCA_p2113(305)28838.5714
0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD (EC:6.5.1.1); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgr:SGR_1023(345)28534.4714(171)1--     [tr:B1VU08_STRGG] conserved hypothetical protein
> srw:TUE45_07257(331)27836.3714(123)0--     [tr:A0A0U5LZG0_STRRE] ykoU; putative ATP-dependent DNA ligase YkoU (EC:6.5.1.1)
> tpr:Tpau_2946(314)28638.1714(116)2--     [tr:D5UU41_TSUPD] DNA polymerase LigD, polymerase domain protein
... ... ...