GFIT result for T01012

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

tcr:508799.60
(583 a.a.)
 

 
    [tr:Q4DZK9_TRYCC] DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> tbr:Tb11.02.4580(575)59055.92056(1928)1
    [tr:Q384Z5_TRYB2] DNA ligase
> lbz:LBRM_11_0130(771)77035.61172
3
    [tr:A4H6G1_LEIBR] putative DNA ligase
> lmi:LMXM_11_0450(746)72736.71116
11
    [tr:E9ANJ1_LEIMU] putative DNA ligase
> ldo:LDBPK_110450(746)69437.21088()6
    [tr:E9BAN3_LEIDB] DNA ligase, putative
> lif:LINJ_11_0450(746)69437.21088(984)4
    [tr:A4HUV6_LEIIN] putative DNA ligase
> lma:LMJF_11_0450(745)68936.31074()6
    [tr:Q4QH35_LEIMA] putative DNA ligase
> cman:A9D14_18190(322)11733.3136()0
K10747  LIG1 hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> vg:22276754(371)9630.2135(3)115
K10747  LIG1  [tr:A0A067XRC5_9CAUD] OZ74_gp097; Caulobacter phage Cr30; DNA ligase (ATP); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> haa:A5892_01020(483)9635.4129()0
K01972  E6.5.1.2  [tr:A0A172YAQ8_9GAMM] hypothetical protein; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
> bbrc:B7019_0700(432)12030.8126()0
K01689  ENO  [tr:W6F843_BIFBR] Enolase; K01689 enolase [EC:4.2.1.11]
> bbrd:BBBR_0675(432)12030.8126()0
K01689  ENO  [tr:D4BNM5_BIFBR] enolase; K01689 enolase [EC:4.2.1.11]
> bbrj:B7017_0691(432)12030.8126()0
K01689  ENO Enolase; K01689 enolase [EC:4.2.1.11]
> bbrn:B2258_0695(432)12030.8126()0
K01689  ENO Enolase; K01689 enolase [EC:4.2.1.11]
> bbrs:BS27_0733(432)12030.8126()0
K01689  ENO eno; Enolase; K01689 enolase [EC:4.2.1.11]
> bbru:Bbr_0725(432)12030.8126()0
K01689  ENO  [tr:F9XY86_BIFBU] eno; Enolase; K01689 enolase [EC:4.2.1.11]
> bbrv:B689b_0742(432)12030.8126()0
K01689  ENO Enolase; K01689 enolase [EC:4.2.1.11]
> bbv:HMPREF9228_1135(432)12030.8126()0
K01689  ENO eno; phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
> bll:BLJ_0684(432)12030.8126()0
K01689  ENO  [tr:D6ZTF1_BIFLJ] eno; Phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
> bln:Blon_1836(432)12030.8126()0
K01689  ENO  [sp:ENO_BIFLS] Phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
> blon:BLIJ_1901(432)12030.8126()0
K01689  ENO  [sp:ENO_BIFLS] enolase; K01689 enolase [EC:4.2.1.11]
> blx:GS08_03555(432)12030.8126()0
K01689  ENO eno; enolase; K01689 enolase [EC:4.2.1.11]
> gsk:KN400_0255(450)17330.6126
2
K04485  radA radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
> gsu:GSU0285(450)17330.6126
3
K04485  radA  [tr:Q74GG1_GEOSL] radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
> ptt:VY86_09395(580)12131.4126
2
K01972  E6.5.1.2  [tr:A0A0F7LP03_PHOTE] DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
> bbre:B12L_0648(432)12030.8125()0
K01689  ENO Enolase; K01689 enolase [EC:4.2.1.11]
> gao:A2G06_01225(450)17330.6125()0
K04485  radA DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
> plu:plu0286(580)12131.4125
1
K01972  E6.5.1.2  [sp:LIGB_PHOLL] unnamed protein product; Similar to putative DNA ligase-like protein YicF of Escherichia coli; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
> blb:BBMN68_771(432)12030.8124()0
K01689  ENO eno; Eno; K01689 enolase [EC:4.2.1.11]
> blf:BLIF_0613(432)12030.8124()0
K01689  ENO  [tr:E8MSL2_BIFL1] enolase; K01689 enolase [EC:4.2.1.11]
> blj:BLD_0775(432)12030.8124()0
K01689  ENO  [sp:ENO_BIFLD] eno; Enolase; K01689 enolase [EC:4.2.1.11]
> blk:BLNIAS_01896(432)12030.8124()0
K01689  ENO  [tr:F8ARF2_BIFLN] enolase; K01689 enolase [EC:4.2.1.11]
> blm:BLLJ_0600(432)12030.8124()0
K01689  ENO  [tr:E8MHL5_BIFL2] enolase; K01689 enolase [EC:4.2.1.11]
> blo:BL1022(432)12030.8124()0
K01689  ENO  [sp:ENO_BIFLO] eno; phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
> blz:BLGT_03845(432)12030.8124()0
K01689  ENO  [tr:A0A0A0UC51_BIFLN] eno; enolase; K01689 enolase [EC:4.2.1.11]
> bsca:BBSC_1435(432)12030.0122()0
K01689  ENO enolase; K01689 enolase [EC:4.2.1.11]
> ccel:CCDG5_0620(826)7931.6122()0
K01971  ligD  [tr:A0A078KJE6_9FIRM] DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ham:HALO1636(1207)15130.5121
0
    [tr:A0A0D6E6E9_9GAMM] Putative uncharacterized protein
> pan:PODANSg09513(684)10431.7121()29
    [tr:B2AA35_PODAN] hypothetical protein
> sasa:106568279(2482)17030.6121
0
    [tr:A0A1S3LSY2_SALSA] tetratricopeptide repeat protein 28-like
> btp:D805_0822(433)12330.9119()0
K01689  ENO  [tr:M4RFX6_9BIFI] eno; enolase; K01689 enolase [EC:4.2.1.11]
> csa:Csal_1518(629)10232.4119()2
K01972  E6.5.1.2  [sp:LIGB_CHRSD] DNA ligase (NAD+); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
> xal:XALC_1240(806)13930.2119()0
K12524  thrA  [tr:D2UA20_XANAP] thrA; putative bifunctional aspartokinase/homoserine dehydrogenaseI(aki-hdi) protein; K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
> lpil:LIP_2515(320)17032.9118()0
K01971  ligD  [tr:A0A0K2SML1_9FIRM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pay:PAU_00221(578)9933.3118
1
K01972  E6.5.1.2  [tr:C7BHE6_PHOAA] yicF; similar to putative dna ligase-like protein yicf of escherichia coli; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
> ppr:PBPRA0007(251)14430.6118
6
K16961  yxeM  [tr:Q6LW51_PHOPR] FLIY; Putative amino acid ABC transporter, periplasmic amino acid-binding portion; K16961 putative amino-acid transport system substrate-binding protein
> aip:107614117(474)10231.4117
0
K20889  IRX7 probable glucuronoxylan glucuronosyltransferase IRX7 isoform X1; K20889 probable glucuronoxylan glucuronosyltransferase IRX7 [EC2.4.1.-]
> bbf:BBB_0704(432)12030.0116()0
K01689  ENO  [tr:I3WHD5_BIFBI] eno; phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11]
> bbi:BBIF_0742(432)12030.0116()0
K01689  ENO  [tr:E3EQQ5_BIFBS] eno; Enolase; K01689 enolase [EC:4.2.1.11]
> bbp:BBPR_0711(432)12030.0116()0
K01689  ENO  [tr:A0A0H3EC42_BIFBP] eno; enolase; K01689 enolase [EC:4.2.1.11]
> bvg:104900300(133)5641.1116(16)242
    [tr:A0A0J8ER04_BETVU] glycine-rich cell wall structural protein 1
> ncc:104958273(1121)6233.9116(16)0
K17480  AATK serine/threonine-protein kinase LMTK1-like; K17480 lemur tyrosine kinase 1 [EC:2.7.10.1]
> sanh:107688755(1082)10230.4116()0
K16601  TTLL4 tubulin polyglutamylase TTLL4-like; K16601 tubulin polyglutamylase TTLL4 [EC:6.-.-.-]
> ats:F775_19362(813)9930.3115()0
    [tr:M8BNS1_AEGTA] hypothetical protein
> hir:HETIRDRAFT_54628(1173)7935.4115
65
K02178  BUB1  [tr:W4KCI7_9HOMO] hypothetical protein; K02178 checkpoint serine/threonine-protein kinase [EC:2.7.11.1]
> sgs:AVL59_19675(349)18530.8115
0
    [tr:A0A1B1AYB6_9ACTN] surface layer protein
> xbv:XBW1_0265(619)10730.8115
1
K01972  E6.5.1.2  [tr:A0A0B6X5J1_XENBV] ligB; DNA ligase B; K01972 DNA ligase (NAD+) [EC:6.5.1.2]
> sgh:107583268(276)12931.8114(9)0
   uncharacterized protein LOC107583268
> svl:Strvi_6614(468)11232.1114()13
    [tr:G2P0K4_STRVO] transposase IS4 family protein
> amq:AMETH_4935(402)6338.1113()2
    [tr:A0A076N4V7_AMYME] pqqE; Radical SAM domain protein
> elv:FNIIJ_129(692)8930.3113
0
K01890  FARSB  [tr:A0A068DSQ2_9FLAO] pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
> kal:KALB_2628(349)7436.5113()4
    [tr:W5W663_9PSEU] DNA polymerase LigD, ligase domain-containing protein
> pfn:HZ99_13785(385)10634.0112
5
K08325  yqhD  [tr:A0A075PDY6_PSEFL] aldehyde reductase; K08325 NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
> rha:RHA1_ro04794(256)8134.6112
173
K00216  entA  [tr:Q0S7A7_RHOJR] dhbA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; K00216 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
> xtn:FD63_09730(378)13132.8112
4
K00101  lldD  [tr:A0A0G3LL51_XANCT] lldD; lactate dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
> acid:CBP33_06040(309)11731.6111()0
   DNA-binding protein YbiB
> acip:CBP36_06480(309)11731.6111()0
   DNA-binding protein YbiB
> acis:CBP35_12460(309)11731.6111()0
   DNA-binding protein YbiB
> bna:106427706(226)9332.3111(4)0
   OTU domain-containing protein At3g57810-like
> boe:106331971(226)9332.3111(11)0
    [tr:A0A0D3B5I7_BRAOL] OTU domain-containing protein At3g57810
> brp:103857756(229)9332.3111(6)2
   OTU domain-containing protein At3g57810
> cam:101495071(4341)9431.9111
9
K19525  VPS13A_C  [tr:A0A1S2YY22_CICAR] uncharacterized LOC101495071; K19525 vacuolar protein sorting-associated protein 13A/C
> ghi:107913190(968)16230.9111(1)0
    [tr:A0A1U8K887_GOSHI] uncharacterized protein LOC107913190
> gja:107111577(5182)11434.2111()0
K10691  UBR4 UBR4; ubiquitin protein ligase E3 component n-recognin 4; K10691 E3 ubiquitin-protein ligase UBR4 [EC:2.3.2.27]
> gra:105793133(1006)16230.9111()0
   uncharacterized LOC105793133
> ibu:IB211_02989c(317)8930.3111()0
    [tr:A0A0S2W7P5_9FIRM] hypothetical protein
> adk:Alide2_0248(348)9630.2110
9
    [tr:F4GEG3_ALIDK] glycosyl transferase family 2
> adn:Alide_0301(348)9630.2110
9
    [tr:E8TTX9_ALIDB] glycosyl transferase family 2
> crb:CARUB_v10009704mg(330)7331.5110(10)18
    [tr:R0I7B7_9BRAS] hypothetical protein
> mph:MLP_10270(162)5538.2110
1
    [tr:F5XMW8_MICPN] hypothetical protein
> msa:Mycsm_01302(1553)13630.1110
21
K03724  lhr  [tr:L0ISH5_9MYCO] Lhr-like helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
> pgr:PGTG_00405(275)11533.0110()55
K20815  NAT2  [tr:E3JRH6_PUCGT] hypothetical protein; K20815 N-terminal acetyltransferase 2
> ptm:GSPATT00033386001(866)6937.7110
621
    [tr:A0BYB6_PARTE] hypothetical protein
> rbp:B6259_10110(337)12632.5110
0
K03856  AROA2  [tr:A0A1W6WFY4_9FIRM] 3-deoxy-7-phosphoheptulonate synthase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
> rhi:NGR_c06870(149)9231.5110(9)0
    [tr:C3MID2_SINFN] hypothetical protein
> sclf:BB341_03005(816)8733.3110
0
   transcriptional regulator
> sve:SVEN_6689(604)17930.2110
11
K00156  poxB  [tr:F2RHN1_STRVP] Pyruvate oxidase; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
> tpk:JO40_06675(1056)16130.4110()0
K01153  hsdR  [tr:A0A088RDE3_9SPIO] deoxyribonuclease HsdR; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
> brg:A4249_13680(352)14330.8109
0
K01599  hemE  [tr:A0A160I136_9CAUL] uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
> bvc:CEP68_08455(352)14330.8109
0
K01599  hemE uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
> har:HEAR1727(297)10331.1109()1
K10747  LIG1  [tr:A4G5U7_HERAR] ATP-dependent DNA ligase precursor; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> llu:AKJ09_07398(358)13130.5109
21
K10914  crp  [tr:A0A0K1Q5S5_9DELT] cAMP-binding protein; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
> mng:MNEG_16452(585)6041.7109(2)0
   hypothetical protein
> pale:102881750(2398)8330.1109(8)1235
K09239  HIVEP  [tr:L5L8X9_PTEAL] HIVEP3; human immunodeficiency virus type I enhancer binding protein 3; K09239 human immunodeficiency virus type I enhancer-binding protein
> jeu:BJP62_08980(540)14931.5108
0
    [tr:A0A1D9BDW7_9NEIS] hypothetical protein
> maqu:Maq22A_c21295(524)14330.1108()0
    [tr:A0A0C6FJS9_9RHIZ] hypothetical protein
> ske:Sked_16530(510)9330.1108
11
K02035  ABC.PE.S  [tr:D1BGL1_SANKS] ABC-type dipeptide transport system, periplasmic component; K02035 peptide/nickel transport system substrate-binding protein
> tez:BKM78_08675(354)7533.3108
0
K02052  ABC.SP.A spermidine/putrescine ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
> vcn:VOLCADRAFT_104421(647)14530.3108(7)1704
    [tr:D8TTI2_VOLCA] hypothetical protein
> abp:AGABI1DRAFT131627(740)7834.6107()11
    [tr:K5WZT8_AGABU] AGABI1DRAFT_131627; hypothetical protein
> brh:RBRH_02371(208)13630.1107()0
K02926  RP-L4  [tr:E5APM1_PARRH] LSU ribosomal protein L1E (= L4P); K02926 large subunit ribosomal protein L4
... ... ...