GFIT result for T01471

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

vma:VAB18032_23715
(323 a.a.)
 
--
 
    [tr:F4F9R5_VERMA] DNA primase small subunit
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> saq:Sare_2236(323)32385.11951(723)4<-     [tr:A8M1D5_SALAI] DNA primase small subunit
> stp:Strop_2095(360)32383.91912(715)5<-     [tr:A4X6P6_SALTO] DNA primase, small subunit
> mau:Micau_3448(326)32182.91886(631)3<-     [tr:D9TEU2_MICAI] DNA primase small subunit
> mil:ML5_4942(326)32182.91884(625)3<-    DNA primase small subunit
> gob:Gobs_1945(355)31766.61497(1037)3--     [tr:D2SEV1_GEOOG] DNA polymerase LigD
> kfl:Kfla_3722(352)32866.21466(264)5--     [tr:D2PNV9_KRIFD] DNA polymerase LigD, polymerase domain-containing protein
> bsd:BLASA_3263(355)31764.71458(1013)5--     [tr:H6RR51_BLASD] DNA polymerase LigD
> cfi:Celf_0509(356)33065.81450(937)4--     [tr:F4H892_CELFA] DNA polymerase LigD, polymerase domain-containing protein
> cfl:Cfla_0584(354)33366.41447(948)5--     [tr:D5UIJ7_CELFN] DNA polymerase LigD, polymerase domain-containing protein
> mmar:MODMU_3676(355)32763.31443(962)2--     [tr:I4F0C3_MODMB] DNA polymerase LigD
> cga:Celgi_0324(365)33165.61436(974)3--     [tr:F8A4N0_CELGA] DNA polymerase LigD, polymerase domain protein
> iva:Isova_1645(357)33565.11434(976)3--     [tr:F6FVH0_ISOV2] DNA polymerase LigD, polymerase domain-containing protein
> xce:Xcel_1675(371)33364.01374(928)4--     [tr:D1BSK6_XYLCX] DNA polymerase LigD, polymerase domain-containing protein
> sct:SCAT_5514(335)32561.21331(897)8--     [tr:F8JRK1_STREN] hypothetical protein
> scy:SCATT_55170(335)32561.21331(897)8--     [tr:F8JRK1_STREN] hypothetical protein
> sgu:SGLAU_28045(336)32659.21319(882)2--    hypothetical protein
> sve:SVEN_6395(343)32759.01318(820)4--     [tr:F2REZ6_STRVP] ATP-dependent DNA ligase (EC:6.5.1.1)
> sdv:BN159_1715(338)32658.91315(876)3--     [tr:K4R0C7_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> amd:AMED_4612(314)32458.61307(246)8--     [tr:D8HVD8_AMYMU] lig; ATP-dependent DNA ligase
> amm:AMES_4557(314)32458.61307(246)8--     [tr:G0FMN1_AMYMS] lig; ATP-dependent DNA ligase
> amn:RAM_23480(314)32458.61307(246)8--     [tr:G0FMN1_AMYMS] ATP-dependent DNA ligase
> amz:B737_4557(314)32458.61307(246)8--    lig; ATP-dependent DNA ligase
> sma:SAV_1696(338)32658.31307(847)1--     [tr:Q82MG4_STRAW] hypothetical protein
> svt:SVTN_31290(342)32757.81292(815)5--    ATP-dependent DNA ligase
> scw:TU94_28790(341)32658.31285(814)4--    ATP-dependent DNA ligase
> sco:SCO6709(341)32656.71282(800)2--     [tr:Q9XAM1_STRCO] SC4C6.19; hypothetical protein
> slv:SLIV_04965(341)32656.71282(799)2--    hypothetical protein
> sbh:SBI_08909(334)32956.81280(790)1--     [tr:D7BZY7_STRBB] hypothetical protein
> svl:Strvi_3580(334)32956.81279(773)9--     [tr:G2PEB7_STRVO] DNA polymerase LigD, polymerase domain-containing protein
> salu:DC74_7354(337)32358.21278(839)5--    hypothetical protein
> sci:B446_30625(347)32658.01274(845)4--     [tr:S5VCP0_STRCU] hypothetical protein
> sho:SHJGH_7372(335)32458.01274(761)4--    hypothetical protein
> shy:SHJG_7611(335)32458.01274(761)4--     [tr:H2JQM4_STRHJ] hypothetical protein
> src:M271_07565(334)32357.01274(766)10--     [tr:A0A0A0NAI2_9ACTO] ATP-dependent DNA ligase
> scb:SCAB_13581(336)32657.41272(795)4--     [tr:C9Z887_STRSW] hypothetical protein
> aja:AJAP_17045(312)32158.61270(151)5--    Hypothetical protein
> stre:GZL_01248(337)32157.61268(854)4--    ATP-dependent DNA ligase
> aoi:AORI_4365(306)31759.01265(125)7--     [tr:R4SWR1_AMYOR] lig; DNA ligase (ATP)
> ssx:SACTE_5877(337)32357.91261(795)2--     [tr:G2NGC1_STREK] DNA polymerase LigD, polymerase domain-containing protein
> sfi:SFUL_6474(345)32556.31258(767)3--     [tr:N0CZ27_9ACTO] eukaryotic-type DNA primase (EC:6.5.1.1)
> sesp:BN6_18810(333)32557.81255(49)9--     [tr:K0JTG2_SACES] DNA polymerase LigD, polymerase domain protein
> sfa:Sfla_0696(336)32356.71249(788)4--     [tr:E8WAH3_STRFA] DNA polymerase LigD, polymerase domain-containing protein
> strp:F750_6168(336)32356.71249(782)4--     [tr:M9U686_9ACTO] ATP-dependent DNA ligase (EC:6.5.1.1)
> sgr:SGR_1023(345)32555.41239(742)1--     [tr:B1VU08_STRGG] hypothetical protein
> bcv:Bcav_0491(361)32958.11235(115)5--     [tr:C5BX79_BEUC1] DNA primase small subunit
> ams:AMIS_68170(340)32755.71227(27)7--     [tr:I0HGA0_ACTM4] hypothetical protein
> gbr:Gbro_3272(328)32056.91216(210)3--     [tr:D0LCY3_GORB4] DNA polymerase LigD
> rha:RHA1_ro05237(323)32156.11202(159)4--     [tr:Q0S618_RHOJR] DNA ligase (ATP), C-terminal
> gor:KTR9_3313(329)31356.91200(235)2--     [tr:J9SN86_9ACTO] putative eukaryotic-type DNA primase
> amq:AMETH_2185(309)31556.51198(25)7--    lig; DNA polymerase LigD, polymerase domain-containing protein
> salb:XNR_0333(339)32954.11198(697)4--     [tr:D6AZX1_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> rop:ROP_52850(323)32255.31197(153)4--     [tr:C1AV42_RHOOB] hypothetical protein
> afs:AFR_34555(319)32554.81195(87)4--     [tr:U5W830_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> roa:Pd630_LPD01759(323)32156.11195(155)3--    putative ATP-dependent DNA ligase ykoU
> nbr:O3I_009195(324)31655.71188(306)6--     [tr:K0ESM6_9NOCA] putative DNA ligase (ATP), C-terminal
> ase:ACPL_7075(341)32353.61187(24)5--     [tr:G8SFG4_ACTS5] DNA ligase (ATP) (EC:6.5.1.1)
> ace:Acel_1378(339)32353.91184(623)2--     [tr:A0LUP0_ACIC1] hypothetical protein
> ncy:NOCYR_1435(316)32055.31179(254)3--     [tr:H6R7N7_NOCCG] putative DNA ligase (ATP), C-terminal
> nca:Noca_3665(360)32854.61177(111)4--     [tr:A1SMY0_NOCSJ] hypothetical protein
> nml:Namu_0584(329)31954.21175(109)4--     [tr:C8X7D0_NAKMY] DNA polymerase LigD, polymerase domain-containing protein
> nfa:nfa13650(320)32254.31174(206)3--     [tr:Q5Z031_NOCFA] hypothetical protein
> ami:Amir_1571(330)32154.81173(1047)3--     [tr:C6WBF2_ACTMD] DNA polymerase LigD, polymerase domain-containing protein
> tpr:Tpau_2946(314)32355.71173(148)2--     [tr:D5UU41_TSUPD] DNA polymerase LigD, polymerase domain-containing protein
> psim:KR76_21650(364)33554.31163(27)2--    ATP-dependent DNA ligase
> actn:L083_6564(320)32353.91161(20)2--     [tr:R4LWM2_9ACTO] DNA polymerase LigD, polymerase domain-containing protein
> gpo:GPOL_c30660(318)31056.51161(129)3--     [tr:H6MVI7_GORPV] ligD; DNA polymerase LigD
> pdx:Psed_4714(323)32353.31158(60)6--     [tr:F4D173_PSEUX] DNA primase small subunit
> tbi:Tbis_2258(332)32451.51149(759)1--     [tr:D6Y393_THEBD] DNA polymerase LigD ligase domain-containing protein
> kal:KALB_6787(338)31552.71130(1021)3--    hypothetical protein
> asd:AS9A_4216(304)31353.01126(266)2--     [tr:F6EKA8_AMYSD] DNA polymerase LigD, polymerase domain-containing protein
> nno:NONO_c59090(337)31653.21125(270)3--    ligD; putative DNA polymerase LigD
> sro:Sros_6714(334)32451.51119(1009)0--     [tr:D2B5B8_STRRD] DNA primase small subunit
> rpy:Y013_00825(312)31353.41114(97)2--     [tr:V9XDE7_9NOCA] ATP-dependent DNA ligase
> cai:Caci_5867(357)31550.21086(207)3--     [tr:C7QDV1_CATAD] DNA polymerase LigD, polymerase domain-containing protein
> sen:SACE_1849(347)32850.61085(538)5--     [tr:A4FAT6_SACEN] DNA ligase (ATP)
> ica:Intca_1898(322)32252.21076(413)5--     [tr:E6SBC1_INTC7] DNA polymerase LigD, polymerase domain-containing protein
> kra:Krad_0652(341)32452.81054(129)1--     [tr:A6W5Q2_KINRD] DNA primase small subunit
> mph:MLP_23260(359)32948.61053(13)4--     [tr:F5XEX4_MICPN] hypothetical protein
> mks:LG40_13460(345)32850.91050(114)4--    ATP-dependent DNA ligase
> art:Arth_3426(414)32149.51044(165)5--     [tr:A0K0I1_ARTS2] hypothetical protein
> mki:LH54_13600(345)32850.31043(107)3--    ATP-dependent DNA ligase
> mkn:MKAN_13620(345)32850.31043(107)3--     [tr:U5WQH5_MYCKA] ATP-dependent DNA ligase
> req:REQ_42490(348)32251.21042(591)1--     [tr:E4W9U1_RHOE1] hypothetical protein
> msa:Mycsm_06080(350)32849.41038(126)5--     [tr:L0J3V2_MYCSM] DNA polymerase LigD, polymerase domain protein
> rer:RER_49750(346)32549.51035(575)1--     [tr:C0ZPI7_RHOE4] hypothetical protein
> rey:O5Y_23605(346)32549.21029(574)1--     [tr:T1VUN9_RHOER] hypothetical protein
> rta:Rta_06820(410)30850.01028(626)2--     [tr:F5XWZ9_RAMTT] eukaryotic-type DNA primase
> apn:Asphe3_38430(414)32147.41023(78)2-- K01971  ligD  [tr:F0M977_ARTPP] DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> maf:MAF_37390(346)32849.71017(119)3--     [tr:F8M957_MYCA0] hypothetical protein
> mbb:BCG_3790c(346)32849.71017(119)3--     [tr:A1KQ62_MYCBP] hypothetical protein
> mbk:K60_038700(346)32849.71017(119)3--    hypothetical protein
> mbm:BCGMEX_3791c(346)32849.71017(119)3--    hypothetical protein
> mbo:Mb3757c(346)32849.71017(119)3--     [tr:Q7TVT9_MYCBO] hypothetical protein
> mbt:JTY_3792(346)32849.71017(119)3--     [tr:C1AII4_MYCBT] hypothetical protein
> mbz:LH58_20165(346)32849.71017(119)3--    ATP-dependent DNA ligase
> mce:MCAN_37521(346)32849.71017(119)2--     [tr:G0TKD7_MYCCP] hypothetical protein
> mcq:BN44_120130(346)32849.71017(119)3--    hypothetical protein
> mcv:BN43_90239(346)32849.71017(119)3--    hypothetical protein
> mcz:BN45_110090(346)32849.71017(108)2--    hypothetical protein
> mra:MRA_3768(346)32849.71017(119)3--     [tr:A5U957_MYCTA] hypothetical protein
... ... ...