KEGG   COMPOUND: C00037Help
Entry
C00037                      Compound                               

Name
Glycine;
Aminoacetic acid;
Gly
Formula
C2H5NO2
Exact mass
75.032
Mol weight
75.0666
Structure
Mol fileKCF fileDB search
Remark
Same as: D00011
Reaction
Pathway
map00120  Primary bile acid biosynthesis
map00230  Purine metabolism
map00260  Glycine, serine and threonine metabolism
map00310  Lysine degradation
map00440  Phosphonate and phosphinate metabolism
map00460  Cyanoamino acid metabolism
map00480  Glutathione metabolism
map00630  Glyoxylate and dicarboxylate metabolism
map00680  Methane metabolism
map00730  Thiamine metabolism
map00860  Porphyrin and chlorophyll metabolism
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01120  Microbial metabolism in diverse environments
map01130  Biosynthesis of antibiotics
map01200  Carbon metabolism
map01230  Biosynthesis of amino acids
map01502  Vancomycin resistance
map02010  ABC transporters
map02026  Biofilm formation - Escherichia coli
map04080  Neuroactive ligand-receptor interaction
map04721  Synaptic vesicle cycle
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00346  Formaldehyde assimilation, serine pathway
M00532  Photorespiration
M00868  Heme biosynthesis, animals and fungi, glycine => heme
Enzyme
1.4.1.1         1.4.1.10        1.4.2.1         1.4.3.3         
1.4.3.19        1.4.4.2         1.4.99.5        1.5.1.22        
1.5.3.1         1.5.8.3         1.8.1.4         1.13.11.78      
1.21.4.2        2.1.1.20        2.1.1.156       2.1.1.162       
2.1.2.1         2.1.2.4         2.1.2.10        2.1.4.1         
2.3.1.13        2.3.1.29        2.3.1.37        2.3.1.65        
2.3.1.71        2.3.1.192       2.3.1.-         2.3.2.15        
2.3.2.-         2.4.2.59        2.4.2.60        2.6.1.4         
2.6.1.35        2.6.1.44        2.6.1.45        2.6.1.60        
2.6.1.63        2.6.1.73        2.6.1.96        2.6.1.112       
3.4.11.1        3.4.11.2        3.4.11.23       3.4.13.-        
3.5.1.24        3.5.1.32        3.5.1.58        3.5.1.71        
3.5.3.2         4.1.2.5         4.1.2.26        4.1.2.42        
4.1.2.48        4.1.2.49        4.1.2.-         4.1.3.14        
4.1.3.41        6.1.1.14        6.3.2.3         6.3.4.13
 » show all
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00037  Glycine (Gly)
 Hormones and transmitters
  Neurotransmitters
   Amino acids
    C00037  Glycine
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303]
 B BLOOD AND BLOOD FORMING ORGANS
  B05 BLOOD SUBSTITUTES AND PERFUSION SOLUTIONS
   B05C IRRIGATING SOLUTIONS
    B05CX Other irrigating solutions
     B05CX03 Glycine
      D00011  Glycine (JP17/USP) <US>
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   Glycine
    D00011  Glycine (JP17/USP)
Pharmaceutical additives in Japan [BR:br08316]
 Stabilizing agent
  D00011  [102546] Glycine
 Buffering agent
  D00011  [102546] Glycine
 Sweetening agent
  D00011  [102546] Glycine
 Base
  D00011  [102546] Glycine
 Flavoring substance
  D00011  [102546] Glycine
 Suspending agent
  D00011  [102546] Glycine
 pH regulator
  D00011  [102546] Glycine
 Diluting agent
  D00011  [102546] Glycine
 Solubilization agent
  D00011  [102546] Glycine
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00011  Glycine
BRITE hierarchy
Other DBs
CAS: 56-40-6
PubChem: 3339
ChEBI: 15428
ChEMBL: CHEMBL773
KNApSAcK: C00001361
PDB-CCD: GLY[PDBj]
3DMET: B01136
NIKKAJI: J1.163K
LinkDB All DBs
KCF data Show

ATOM        5
            1   C6a C    24.9184  -17.1304
            2   C1b C    26.0707  -17.8870
            3   O6a O    23.6903  -17.8231
            4   O6a O    24.9418  -15.7279
            5   N1a N    27.2837  -17.2772
BOND        4
            1     1   2 1
            2     1   3 1
            3     1   4 2
            4     2   5 1

» Japanese version

KEGG   COMPOUND: C00041Help
Entry
C00041                      Compound                               

Name
L-Alanine;
L-2-Aminopropionic acid;
L-alpha-Alanine
Formula
C3H7NO2
Exact mass
89.0477
Mol weight
89.0932
Structure
Mol fileKCF fileDB search
Remark
Same as: D00012
Reaction
Pathway
map00250  Alanine, aspartate and glutamate metabolism
map00270  Cysteine and methionine metabolism
map00430  Taurine and hypotaurine metabolism
map00450  Selenocompound metabolism
map00473  D-Alanine metabolism
map00710  Carbon fixation in photosynthetic organisms
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01120  Microbial metabolism in diverse environments
map01200  Carbon metabolism
map01230  Biosynthesis of amino acids
map01502  Vancomycin resistance
map02010  ABC transporters
map04122  Sulfur relay system
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type
Enzyme
1.4.1.1         1.5.1.17        2.3.1.47        2.6.1.2         
2.6.1.12        2.6.1.15        2.6.1.18        2.6.1.30        
2.6.1.37        2.6.1.40        2.6.1.41        2.6.1.43        
2.6.1.44        2.6.1.46        2.6.1.47        2.6.1.51        
2.6.1.56        2.6.1.58        2.6.1.66        2.6.1.71        
2.6.1.77        2.6.1.84        2.6.1.96        2.6.1.99        
2.6.1.108       2.6.1.113       2.6.1.115       2.8.1.7         
2.8.1.9         3.5.1.28        3.7.1.3         4.1.1.12        
4.1.1.64        4.4.1.16        5.1.1.1         6.1.1.7         
6.3.2.8         6.3.2.49        6.3.2.-
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00041  Alanine (Ala)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Alanine
    D00012  Alanine (USP)
Pharmaceutical additives in Japan [BR:br08316]
 Stabilizing agent
  D00012  [003609] L-Alanine
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00012  L-Alanine
BRITE hierarchy
Other DBs
CAS: 56-41-7
PubChem: 3343
ChEBI: 16977
ChEMBL: CHEMBL279597
KNApSAcK: C00001332
PDB-CCD: ALA[PDBj]
3DMET: B00011
NIKKAJI: J9.168E
LinkDB All DBs
KCF data Show

ATOM        6
            1   O6a O    22.7503  -15.7507
            2   C6a C    23.9627  -15.0506
            3   C1c C    25.1753  -15.7507
            4   C1a C    26.3878  -15.0506
            5   O6a O    23.9627  -13.6508
            6   N1a N    25.1753  -17.1506
BOND        5
            1     1   2 1
            2     2   3 1
            3     3   4 1
            4     2   5 2
            5     3   6 1 #Down

» Japanese version

KEGG   COMPOUND: C00183Help
Entry
C00183                      Compound                               

Name
L-Valine;
2-Amino-3-methylbutyric acid
Formula
C5H11NO2
Exact mass
117.079
Mol weight
117.1463
Structure
Mol fileKCF fileDB search
Remark
Same as: D00039
Reaction
Pathway
map00280  Valine, leucine and isoleucine degradation
map00290  Valine, leucine and isoleucine biosynthesis
map00311  Penicillin and cephalosporin biosynthesis
map00460  Cyanoamino acid metabolism
map00770  Pantothenate and CoA biosynthesis
map00966  Glucosinolate biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01063  Biosynthesis of alkaloids derived from shikimate pathway
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01130  Biosynthesis of antibiotics
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate
M00672  Penicillin biosynthesis, aminoadipate + cycteine + valine => penicillin
M00673  Cephamycin C biosynthesis, aminoadipate + cycteine + valine => cephamycin C
Enzyme
1.4.1.8         1.4.1.9         1.4.1.23        1.14.14.38      
1.14.14.39      2.6.1.6         2.6.1.32        2.6.1.42        
2.6.1.66        4.1.1.14        6.1.1.9         6.3.2.26        
6.3.2.47
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00183  Valine (Val)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Valine
    D00039  Valine (USP)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00039  L-Valine
BRITE hierarchy
Other DBs
CAS: 72-18-4
PubChem: 3483
ChEBI: 16414
ChEMBL: CHEMBL43068
KNApSAcK: C00001398
PDB-CCD: VAL[PDBj]
3DMET: B00054
NIKKAJI: J9.179K
LinkDB All DBs
KCF data Show

ATOM        8
            1   C1c C    24.8500  -19.0764
            2   C1c C    26.0666  -18.3804
            3   C6a C    23.6334  -18.3629
            4   N1a N    24.8442  -20.4802
            5   C1a C    27.2716  -19.0881
            6   C1a C    26.0725  -16.9825
            7   O6a O    22.4226  -19.0589
            8   O6a O    23.6392  -16.9707
BOND        7
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     2   6 1
            6     3   7 1
            7     3   8 2

» Japanese version

KEGG   COMPOUND: C00123Help
Entry
C00123                      Compound                               

Name
L-Leucine;
2-Amino-4-methylvaleric acid;
(2S)-alpha-2-Amino-4-methylvaleric acid;
(2S)-alpha-Leucine
Formula
C6H13NO2
Exact mass
131.0946
Mol weight
131.1729
Structure
Mol fileKCF fileDB search
Remark
Same as: D00030
Reaction
Pathway
map00280  Valine, leucine and isoleucine degradation
map00290  Valine, leucine and isoleucine biosynthesis
map00966  Glucosinolate biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01065  Biosynthesis of alkaloids derived from histidine and purine
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04150  mTOR signaling pathway
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Enzyme
1.4.1.9         1.14.13.-       2.3.1.66        2.6.1.6         
2.6.1.42        2.6.1.67        3.5.1.64        5.4.3.7         
6.1.1.4         6.3.2.47
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00123  Leucine (Leu)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Leucine
    D00030  Leucine (USP)
Pharmaceutical additives in Japan [BR:br08316]
 Stabilizing agent
  D00030  [003619] L-Leucine
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00030  L-Leucine
BRITE hierarchy
Other DBs
CAS: 61-90-5
PubChem: 3423
ChEBI: 15603
ChEMBL: CHEMBL291962
KNApSAcK: C00001377
PDB-CCD: LEU[PDBj]
3DMET: B00034
NIKKAJI: J1.167C
LinkDB All DBs
KCF data Show

ATOM        9
            1   C1c C    25.0761  -19.4138
            2   C1b C    26.2633  -18.6769
            3   C6a C    23.8420  -18.7586
            4   N1a N    25.1229  -20.8173
            5   C1c C    27.4974  -19.3377
            6   O6a O    22.6841  -19.5483
            7   O6a O    23.8654  -17.3551
            8   C1a C    28.6846  -18.6007
            9   C1a C    27.5442  -20.7356
BOND        8
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     3   6 1
            6     3   7 2
            7     5   8 1
            8     5   9 1

» Japanese version

KEGG   COMPOUND: C00073Help
Entry
C00073                      Compound                               

Name
L-Methionine;
Methionine;
L-2-Amino-4methylthiobutyric acid
Formula
C5H11NO2S
Exact mass
149.051
Mol weight
149.2113
Structure
Mol fileKCF fileDB search
Remark
Same as: D00019
Reaction
Pathway
map00270  Cysteine and methionine metabolism
map00966  Glucosinolate biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01070  Biosynthesis of plant hormones
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map01523  Antifolate resistance
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00017  Methionine biosynthesis, apartate => homoserine => methionine
M00034  Methionine salvage pathway
M00035  Methionine degradation
M00368  Ethylene biosynthesis, methionine => ethylene
M00609  Cysteine biosynthesis, methionine => cysteine
Enzyme
1.1.99.38       1.3.98.3        1.4.3.2         1.8.4.11        
1.8.4.13        1.8.4.14        1.17.98.2       1.21.98.1       
1.21.98.3       1.21.98.4       1.97.1.4        2.1.1.3         
2.1.1.5         2.1.1.10        2.1.1.12        2.1.1.13        
2.1.1.14        2.1.1.280       2.1.1.308       2.1.1.326       
2.1.1.342       2.1.1.350       2.1.1.-         2.5.1.6         
2.5.1.49        2.5.1.63        2.5.1.94        2.5.1.120       
2.5.1.147       2.6.1.5         2.6.1.57        2.6.1.73        
2.6.1.88        2.6.1.-         2.8.1.6         2.8.1.8         
2.8.4.3         2.8.4.4         2.8.4.5         3.4.13.12       
3.5.1.31        3.13.1.8        4.1.1.57        4.1.3.44        
4.1.99.17       4.1.99.19       4.1.99.22       4.1.99.23       
4.3.1.30        4.3.1.32        4.4.1.11        4.7.1.1         
5.1.1.2         6.1.1.10
 » show all
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00073  Methionine (Met)
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303]
 V VARIOUS
  V03 ALL OTHER THERAPEUTIC PRODUCTS
   V03A ALL OTHER THERAPEUTIC PRODUCTS
    V03AB Antidotes
     V03AB26 Methionine
      D00019  Methionine (USP)
Therapeutic category of drugs in Japan [BR:br08301]
 3  Agents affecting metabolism
  39  Other agents affecting metabolism
   392  Antidotes
    3929  Others
     D00019  Methionine (USP); L-Methionine (JP17)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   Methionine
    D00019  Methionine (USP)
Pharmaceutical additives in Japan [BR:br08316]
 Stabilizing agent
  D00019  [001621] L-Methionine
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00019  L-Methionine
BRITE hierarchy
Other DBs
CAS: 63-68-3
PubChem: 3373
ChEBI: 16643
ChEMBL: CHEMBL42336
KNApSAcK: C00001379
PDB-CCD: MET[PDBj]
3DMET: B01148
NIKKAJI: J9.174J
LinkDB All DBs
KCF data Show

ATOM        9
            1   C1c C    24.5047  -19.4197
            2   C6a C    23.3598  -18.6719
            3   C1b C    25.7313  -18.7361
            4   N1a N    24.5455  -20.8273
            5   O6a O    22.1332  -19.3553
            6   O6a O    23.3772  -17.2641
            7   C1b C    26.9405  -19.4546
            8   S2a S    28.1672  -18.7712
            9   C1a C    29.3647  -19.4896
BOND        8
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     2   6 2
            6     3   7 1
            7     7   8 1
            8     8   9 1

» Japanese version

KEGG   COMPOUND: C00407Help
Entry
C00407                      Compound                               

Name
L-Isoleucine;
2-Amino-3-methylvaleric acid
Formula
C6H13NO2
Exact mass
131.0946
Mol weight
131.1729
Structure
Mol fileKCF fileDB search
Remark
Same as: D00065
Reaction
Pathway
map00280  Valine, leucine and isoleucine degradation
map00290  Valine, leucine and isoleucine biosynthesis
map00460  Cyanoamino acid metabolism
map00960  Tropane, piperidine and pyridine alkaloid biosynthesis
map00966  Glucosinolate biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01064  Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01130  Biosynthesis of antibiotics
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Enzyme
1.4.1.9         1.4.3.2         1.14.11.45      1.14.14.38      
1.14.14.39      2.6.1.32        2.6.1.42        5.1.1.21        
6.1.1.5         6.3.2.47        6.3.2.50
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00407  Isoleucine (Ile)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Isoleucine
    D00065  Isoleucine (USP)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00065  L-Isoleucine
BRITE hierarchy
Other DBs
CAS: 73-32-5
PubChem: 3697
ChEBI: 17191
ChEMBL: CHEMBL1233584 CHEMBL1869615
KNApSAcK: C00001374
PDB-CCD: ILE[PDBj]
3DMET: B01236
NIKKAJI: J2.818E
LinkDB All DBs
KCF data Show

ATOM        9
            1   C1c C    22.4922  -17.1397
            2   C1c C    23.6796  -16.4029
            3   C6a C    21.2581  -16.4789
            4   N1a N    22.5391  -18.5377
            5   C1b C    24.9137  -17.0637
            6   C1a C    23.6387  -15.0049
            7   O6a O    20.1001  -17.2742
            8   O6a O    21.2815  -15.0809
            9   C1a C    26.1069  -16.3268
BOND        8
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     2   6 1 #Up
            6     3   7 1
            7     3   8 2
            8     5   9 1

» Japanese version

KEGG   COMPOUND: C00079Help
Entry
C00079                      Compound                               

Name
L-Phenylalanine;
(S)-alpha-Amino-beta-phenylpropionic acid
Formula
C9H11NO2
Exact mass
165.079
Mol weight
165.1891
Structure
Mol fileKCF fileDB search
Remark
Same as: D00021
Reaction
Pathway
map00360  Phenylalanine metabolism
map00400  Phenylalanine, tyrosine and tryptophan biosynthesis
map00460  Cyanoamino acid metabolism
map00940  Phenylpropanoid biosynthesis
map00960  Tropane, piperidine and pyridine alkaloid biosynthesis
map00966  Glucosinolate biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map00998  Biosynthesis of secondary metabolites - other antibiotics
map01060  Biosynthesis of plant secondary metabolites
map01061  Biosynthesis of phenylpropanoids
map01063  Biosynthesis of alkaloids derived from shikimate pathway
map01064  Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01070  Biosynthesis of plant hormones
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01130  Biosynthesis of antibiotics
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00024  Phenylalanine biosynthesis, chorismate => phenylalanine
M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
M00137  Flavanone biosynthesis, phenylalanine => naringenin
Enzyme
1.4.1.20        1.4.3.2         1.11.1.21       1.13.12.9       
1.14.14.40      1.14.16.1       1.14.16.7       2.3.1.53        
2.6.1.1         2.6.1.5         2.6.1.9         2.6.1.28        
2.6.1.57        2.6.1.58        2.6.1.64        2.6.1.70        
2.6.1.-         3.4.17.23       4.1.1.28        4.1.1.53        
4.1.1.109       4.2.1.51        4.2.1.91        4.3.1.24        
4.3.1.25        5.1.1.11        5.4.3.10        5.4.3.11        
6.1.1.20        6.3.2.40        6.3.2.-
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00079  Phenylalanine (Phe)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Phenylalanine
    D00021  Phenylalanine (USP/INN)
Pharmaceutical additives in Japan [BR:br08316]
 Diluting agent
  D00021  [002317] L-Phenylalanine
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00021  L-Phenylalanine
BRITE hierarchy
Other DBs
CAS: 63-91-2
PubChem: 3379
ChEBI: 17295
ChEMBL: CHEMBL301523
KNApSAcK: C00001386
PDB-CCD: PHE[PDBj]
3DMET: B01151
NIKKAJI: J9.175H
LinkDB All DBs
KCF data Show

ATOM        12
            1   C8y C    25.3400  -16.0300
            2   C8x C    25.3400  -17.5000
            3   C8x C    24.0800  -18.2000
            4   C8x C    22.8900  -17.5000
            5   C8x C    22.8900  -16.0300
            6   C8x C    24.0800  -15.3300
            7   C1b C    26.5300  -15.3300
            8   C1c C    27.7200  -16.0300
            9   C6a C    28.9100  -15.3300
            10  O6a O    30.1000  -16.0300
            11  O6a O    28.9100  -13.9300
            12  N1a N    27.7200  -17.5000
BOND        12
            1     1   2 2
            2     2   3 1
            3     3   4 2
            4     4   5 1
            5     5   6 2
            6     1   6 1
            7     1   7 1
            8     7   8 1
            9     8   9 1
            10    9  10 1
            11    9  11 2
            12    8  12 1 #Up

» Japanese version

KEGG   COMPOUND: C00078Help
Entry
C00078                      Compound                               

Name
L-Tryptophan;
Tryptophan;
(S)-alpha-Amino-beta-(3-indolyl)-propionic acid
Formula
C11H12N2O2
Exact mass
204.0899
Mol weight
204.2252
Structure
Mol fileKCF fileDB search
Remark
Same as: D00020
Reaction
Pathway
map00260  Glycine, serine and threonine metabolism
map00380  Tryptophan metabolism
map00400  Phenylalanine, tyrosine and tryptophan biosynthesis
map00404  Staurosporine biosynthesis
map00901  Indole alkaloid biosynthesis
map00966  Glucosinolate biosynthesis
map00970  Aminoacyl-tRNA biosynthesis
map00998  Biosynthesis of secondary metabolites - other antibiotics
map01060  Biosynthesis of plant secondary metabolites
map01061  Biosynthesis of phenylpropanoids
map01063  Biosynthesis of alkaloids derived from shikimate pathway
map01070  Biosynthesis of plant hormones
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01130  Biosynthesis of antibiotics
map01210  2-Oxocarboxylic acid metabolism
map01230  Biosynthesis of amino acids
map04361  Axon regeneration
map04726  Serotonergic synapse
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05143  African trypanosomiasis
map05230  Central carbon metabolism in cancer
Module
M00023  Tryptophan biosynthesis, chorismate => tryptophan
M00037  Melatonin biosynthesis, tryptophan => serotonin => melatonin
M00038  Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate
M00370  Glucosinolate biosynthesis, tryptophan => glucobrassicin
M00786  Fumitremorgin alkaloid biosynthesis, tryptophan + proline => fumitremorgin C/A
M00789  Rebeccamycin biosynthesis, tryptophan => rebeccamycin
M00790  Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin
M00805  Staurosporine biosynthesis, tryptophan => staurosporine
M00808  Violacein biosynthesis, tryptophan => violacein
Enzyme
1.3.3.10        1.4.1.19        1.4.3.2         1.4.3.-         
1.13.11.11      1.13.11.52      1.13.12.3       1.13.99.3       
1.14.14.156     1.14.16.4       1.14.19.9       1.14.19.58      
1.14.19.59      2.1.1.106       2.5.1.34        2.5.1.80        
2.6.1.27        2.6.1.28        2.6.1.99        2.6.1.-         
3.5.1.57        4.1.1.28        4.1.1.105       4.1.99.1        
4.1.99.25       4.2.1.20        4.2.1.122       4.3.1.31        
6.1.1.2         6.3.2.-
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00078  Tryptophan (Trp)
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303]
 N NERVOUS SYSTEM
  N06 PSYCHOANALEPTICS
   N06A ANTIDEPRESSANTS
    N06AX Other antidepressants
     N06AX02 Tryptophan
      D00020  Tryptophan (USP/INN)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Tryptophan
    D00020  Tryptophan (USP/INN)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00020  L-Tryptophan
BRITE hierarchy
Other DBs
CAS: 73-22-3
PubChem: 3378
ChEBI: 16828
ChEMBL: CHEMBL54976
KNApSAcK: C00001396
PDB-CCD: TRP[PDBj]
3DMET: B01150
NIKKAJI: J9.181B
LinkDB All DBs
KCF data Show

ATOM        15
            1   C8y C    17.0958  -16.0419
            2   C8y C    18.4268  -16.3221
            3   C8y C    16.3953  -17.2327
            4   C8x C    16.3953  -14.7810
            5   C1b C    19.4775  -15.4815
            6   N4x N    17.2359  -18.2835
            7   C8x C    14.9243  -17.2327
            8   C8x C    14.9943  -14.7810
            9   C1c C    20.7384  -16.1120
            10  C8x C    14.2238  -16.0419
            11  N1a N    20.7384  -17.5830
            12  C6a C    21.9292  -15.4815
            13  O6a O    23.1201  -16.1820
            14  O6a O    21.9292  -14.0805
            15  C8x C    18.4268  -17.7221
BOND        16
            1     1   2 1
            2     1   3 2
            3     1   4 1
            4     2   5 1
            5     3   6 1
            6     3   7 1
            7     4   8 2
            8     5   9 1
            9     7  10 2
            10    9  11 1 #Up
            11    9  12 1
            12   12  13 1
            13   12  14 2
            14    8  10 1
            15    2  15 2
            16   15   6 1

» Japanese version

KEGG   COMPOUND: C00065Help
Entry
C00065                      Compound                               

Name
L-Serine;
L-2-Amino-3-hydroxypropionic acid;
L-3-Hydroxy-alanine;
Serine
Formula
C3H7NO3
Exact mass
105.0426
Mol weight
105.0926
Structure
Mol fileKCF fileDB search
Remark
Same as: D00016
Reaction
Pathway
map00260  Glycine, serine and threonine metabolism
map00261  Monobactam biosynthesis
map00270  Cysteine and methionine metabolism
map00460  Cyanoamino acid metabolism
map00600  Sphingolipid metabolism
map00630  Glyoxylate and dicarboxylate metabolism
map00680  Methane metabolism
map00920  Sulfur metabolism
map00970  Aminoacyl-tRNA biosynthesis
map00998  Biosynthesis of secondary metabolites - other antibiotics
map00999  Biosynthesis of secondary metabolites - unclassified
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01120  Microbial metabolism in diverse environments
map01130  Biosynthesis of antibiotics
map01200  Carbon metabolism
map01230  Biosynthesis of amino acids
map01502  Vancomycin resistance
map02010  ABC transporters
map04071  Sphingolipid signaling pathway
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00020  Serine biosynthesis, glycerate-3P => serine
M00021  Cysteine biosynthesis, serine => cysteine
M00035  Methionine degradation
M00094  Ceramide biosynthesis
M00338  Cysteine biosynthesis, homocysteine + serine => cysteine
M00346  Formaldehyde assimilation, serine pathway
M00532  Photorespiration
M00736  Nocardicin A biosynthesis, L-pHPG + arginine + serine => nocardicin A
M00785  Cycloserine biosynthesis, arginine/serine => cycloserine
M00875  Staphyloferrin B biosynthesis, L-serine => staphyloferrin B
Enzyme
1.1.1.276       1.1.1.387       1.4.1.7         2.1.2.1         
2.3.1.30        2.3.1.50        2.6.1.45        2.6.1.51        
2.7.1.80        2.7.1.225       2.7.1.226       2.7.8.4         
2.7.8.8         2.7.8.29        2.7.8.38        2.8.1.4         
3.1.3.3         3.1.4.13        3.5.1.61        4.2.1.20        
4.2.1.22        4.2.1.50        4.2.1.122       4.3.1.17        
4.3.1.19        5.1.1.10        5.1.1.18        6.1.1.11        
6.3.2.14
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00065  Serine (Ser)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00016  L-Serine
BRITE hierarchy
Other DBs
CAS: 56-45-1
PubChem: 3365
ChEBI: 17115
ChEMBL: CHEMBL11298
KNApSAcK: C00001393
PDB-CCD: SER[PDBj]
3DMET: B01145
NIKKAJI: J1.195I
LinkDB All DBs
KCF data Show

ATOM        7
            1   C1c C    23.5961  -17.5357
            2   C6a C    22.4445  -16.7873
            3   C1b C    24.8238  -16.8518
            4   N1a N    23.6370  -18.9388
            5   O6a O    21.2226  -17.4714
            6   O6a O    22.4677  -15.3785
            7   O1a O    26.0339  -17.5708
BOND        6
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     2   6 2
            6     3   7 1

» Japanese version

KEGG   COMPOUND: C00188Help
Entry
C00188                      Compound                               

Name
L-Threonine;
2-Amino-3-hydroxybutyric acid
Formula
C4H9NO3
Exact mass
119.0582
Mol weight
119.1192
Structure
Mol fileKCF fileDB search
Remark
Same as: D00041
Reaction
Pathway
map00260  Glycine, serine and threonine metabolism
map00261  Monobactam biosynthesis
map00290  Valine, leucine and isoleucine biosynthesis
map00860  Porphyrin and chlorophyll metabolism
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01120  Microbial metabolism in diverse environments
map01130  Biosynthesis of antibiotics
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04974  Protein digestion and absorption
map04978  Mineral absorption
Module
M00018  Threonine biosynthesis, aspartate => homoserine => threonine
M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Enzyme
1.1.1.103       2.2.1.8         2.7.1.177       2.7.7.87        
3.4.-.-         4.1.2.5         4.1.2.48        4.2.3.1         
4.3.1.19        5.1.1.6         6.1.1.3         6.3.2.-
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00188  Threonine (Thr)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Threonine
    D00041  Threonine (USP)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00041  L-Threonine
BRITE hierarchy
Other DBs
CAS: 72-19-5
PubChem: 3488
ChEBI: 16857
ChEMBL: CHEMBL291747
KNApSAcK: C00001394
PDB-CCD: THR[PDBj]
3DMET: B01182
NIKKAJI: J21.883I
LinkDB All DBs
KCF data Show

ATOM        8
            1   O6a O    22.5407  -18.2704
            2   C6a C    23.7531  -17.5704
            3   C1c C    24.9657  -18.2704
            4   C1c C    26.1781  -17.5704
            5   C1a C    27.3906  -18.2704
            6   O6a O    23.7531  -16.1705
            7   N1a N    24.9657  -19.6703
            8   O1a O    26.1781  -16.1703
BOND        7
            1     1   2 1
            2     2   3 1
            3     3   4 1
            4     4   5 1
            5     2   6 2
            6     3   7 1 #Down
            7     4   8 1 #Down

» Japanese version

KEGG   COMPOUND: C00152Help
Entry
C00152                      Compound                               

Name
L-Asparagine;
2-Aminosuccinamic acid
Formula
C4H8N2O3
Exact mass
132.0535
Mol weight
132.1179
Structure
Mol fileKCF fileDB search
Remark
Drug group: DG01672
Reaction
Pathway
map00250  Alanine, aspartate and glutamate metabolism
map00460  Cyanoamino acid metabolism
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01230  Biosynthesis of amino acids
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Enzyme
1.14.11.39      2.3.2.7         2.6.1.14        3.2.2.11        
3.5.1.1         3.5.1.38        3.5.5.4         4.2.1.65        
6.1.1.22        6.3.1.1         6.3.1.4         6.3.5.4
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00152  Asparagine (Asn)
BRITE hierarchy
Other DBs
CAS: 70-47-3
PubChem: 3452
ChEBI: 17196
ChEMBL: CHEMBL58832
KNApSAcK: C00001341 C00034027
PDB-CCD: 41Q[PDBj] ASN[PDBj]
3DMET: B00043
NIKKAJI: J9.178B
LinkDB All DBs
KCF data Show

ATOM        9
            1   C1c C    17.9993  -16.4694
            2   C1b C    19.1857  -15.8412
            3   C5a C    20.3722  -16.4694
            4   N1a N    21.6983  -15.8412
            5   O5a O    20.3720  -17.9349
            6   C6a C    16.8128  -15.8412
            7   O6a O    15.6264  -16.5390
            8   O6a O    16.8128  -14.4454
            9   N1a N    17.9993  -17.9349
BOND        8
            1     1   2 1
            2     2   3 1
            3     3   4 1
            4     3   5 2
            5     1   6 1
            6     6   7 1
            7     6   8 2
            8     1   9 1 #Down

» Japanese version

KEGG   COMPOUND: C00064Help
Entry
C00064                      Compound                               

Name
L-Glutamine;
L-2-Aminoglutaramic acid
Formula
C5H10N2O3
Exact mass
146.0691
Mol weight
146.1445
Structure
Mol fileKCF fileDB search
Remark
Same as: D00015
Reaction
Pathway
map00220  Arginine biosynthesis
map00230  Purine metabolism
map00240  Pyrimidine metabolism
map00250  Alanine, aspartate and glutamate metabolism
map00471  D-Glutamine and D-glutamate metabolism
map00630  Glyoxylate and dicarboxylate metabolism
map00910  Nitrogen metabolism
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01120  Microbial metabolism in diverse environments
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map02020  Two-component system
map04724  Glutamatergic synapse
map04727  GABAergic synapse
map04964  Proximal tubule bicarbonate reclamation
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00048  Inosine monophosphate biosynthesis, PRPP + glutamine => IMP
M00051  Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP
Enzyme
1.4.1.13        1.4.1.14        1.4.7.1         2.3.1.14        
2.3.1.68        2.3.2.1         2.3.2.14        2.4.2.14        
2.6.1.15        2.6.1.16        2.6.1.50        2.6.1.64        
2.6.1.85        2.6.1.86        2.6.1.100       2.6.1.101       
2.7.3.13        3.5.1.2         3.5.1.38        4.1.3.27        
4.3.2.10        4.3.3.6         5.1.1.10        6.1.1.18        
6.3.1.2         6.3.4.2         6.3.5.1         6.3.5.2         
6.3.5.3         6.3.5.4         6.3.5.5         6.3.5.6         
6.3.5.7         6.3.5.9         6.3.5.10        6.3.5.11        
6.3.5.12        6.3.5.13        6.3.5.-
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00064  Glutamine (Gln)
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303]
 A ALIMENTARY TRACT AND METABOLISM
  A16 OTHER ALIMENTARY TRACT AND METABOLISM PRODUCTS
   A16A OTHER ALIMENTARY TRACT AND METABOLISM PRODUCTS
    A16AA Amino acids and derivatives
     A16AA03 Glutamine
      D00015  Glutamine (USP) <JP/US>
USP drug classification [BR:br08302]
 Gastrointestinal Agents
  Gastrointestinal Agents, Other
   Short Bowel Syndrome Agents
    Glutamine
     D00015  Glutamine (USP)
 Genetic or Enzyme Disorder: Replacement, Modifiers, Treatment
  Short Bowel Syndrome Agents
   Glutamine
    D00015  Glutamine (USP)
Therapeutic category of drugs in Japan [BR:br08301]
 2  Agents affecting individual organs
  23  Digestive organ agents
   232  Peptic ulcer agents
    2322  Glutamines
     D00015  Glutamine (USP); L-Glutamine (JP17)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Glutamine
    D00015  Glutamine (USP)
Pharmaceutical additives in Japan [BR:br08316]
 Diluting agent
  D00015  [003612] L-Glutamine
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00015  L-Glutamine
New drug approvals in the USA [br08319.html]
 New molecular entities and new therapeutic biological products
  D00015
New drug approvals in the USA, Europe and Japan [br08328.html]
 Approval dates by FDA, EMA and PMDA
  D00015
BRITE hierarchy
Other DBs
CAS: 56-85-9
PubChem: 3364
ChEBI: 18050
ChEMBL: CHEMBL930
KNApSAcK: C00001359
PDB-CCD: GLN[PDBj]
3DMET: B00017
NIKKAJI: J9.170G
LinkDB All DBs
KCF data Show

ATOM        10
            1   C1c C    23.8378  -17.4606
            2   C1b C    25.0254  -16.7178
            3   C6a C    22.6035  -16.7995
            4   N1a N    23.8787  -18.8587
            5   C1b C    26.2597  -17.3787
            6   O6a O    21.4451  -17.5952
            7   O6a O    22.6209  -15.4015
            8   C5a C    27.4472  -16.6416
            9   N1a N    28.6814  -17.3027
            10  O5a O    27.4704  -15.2435
BOND        9
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Down
            4     2   5 1
            5     3   6 1
            6     3   7 2
            7     5   8 1
            8     8   9 1
            9     8  10 2

» Japanese version

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