KEGG   ORTHOLOGY: K18516
Entry
K18516            RNA       KO                                     

Name
csrC
Definition
small regulatory RNA CsrC
Pathway
ko02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ko00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    K18516  csrC; small regulatory RNA CsrC
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis
    K18516  csrC; small regulatory RNA CsrC
  09184 RNA family
   03100 Non-coding RNAs
    K18516  csrC; small regulatory RNA CsrC
Messenger RNA biogenesis [BR:ko03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Bacterial Small RNA Regulators
     K18516  csrC; small regulatory RNA CsrC
Non-coding RNAs [BR:ko03100]
 Other RNA
  Unclassified
   K18516  csrC; small regulatory RNA CsrC
Genes
ECO: b4457(csrC)
ECJ: JWR0214(csrC)
ECD: ECDH10B_4055(csrC)
EBW: BWG_4261(csrC)
ECOK: ECMDS42_3304(csrC)
ECF: ECH74115_5310
EOI: ECO111_ncRNA66(csrC)
EOJ: ECO26_ncRNA61(csrC)
EOH: ECO103_ncRNA63(csrC)
ECK: EC55989miscRNA94(csrC)
ECG: E2348C_ncR_67(csrC)
ECR: ECIAI1_miscRNA_83(csrC)
ECQ: ECED1_misc_RNA_81(csrC)
EUM: ECUMN_misc_RNA_73(csrC)
ECT: ECIAI39_miscRNA69(csrC)
ECZ: ECS88_misc_RNA_80(csrC)
EDJ: ECDH1ME8569_o0077(csrC)
ELW: ECW_nc4167(csrC)
ELF: LF82_s0380(csrC)
EFE: EFER_misc_RNA_60(csrC)
SEY: CsrC(CsrC)
SHB: SU5_nc6
SED: SeD_A4391
ESA: ESA_04043
CKO: CKO_03148
YPH: YPC_4231(csrC)
YPA: YPA_r083
YPN: YPN_r031
YEN: YEs002
 » show all
Reference
  Authors
Suzuki K, Babitzke P, Kushner SR, Romeo T
  Title
Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E.
  Journal
Genes Dev 20:2605-17 (2006)
DOI:10.1101/gad.1461606
  Sequence
[eco:b4457]
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