Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1230
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Entry
TC41_1230 CDS
T01821
Symbol
rluD
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aad03009
]
TC41_1230 (rluD)
Enzymes [BR:
aad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
TC41_1230 (rluD)
Ribosome biogenesis [BR:
aad03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TC41_1230 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AEJ43172
UniProt:
F8IH87
LinkDB
All DBs
Position
1215428..1216387
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AA seq
319 aa
AA seq
DB search
MKEDTMRPAIHVQYEVSAEDAGERLDRWLTDRLQEDDIEVSRTQVQRWLDNGLIRRARPG
RLKASEPVEAGDLYEVDVPEEEPLELVPDEGVPFVVAYEDDDVIVVDKPRGVVVHPGAGH
LRGTLVNGLLARGTSLCTLAGAMRPGVVHRIDKDTSGLVVFAKSDRAYRALVEAFRAHDV
EREYVAIAHGRMPHRKGTIDMPIARDPADRQRMAVRQGGKRAVTHFEVLELFANYSYLRL
RLETGRTHQIRVHLAAIGHPIAGDPVYGPRHTLPIDGQALHARTLGFTHPDGRRLRFESA
VPSDMAWLLEGLRQGRIGA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggaggacaccatgagaccggccatccacgttcaatatgaggtgagtgcggaggac
gcgggcgagcggctcgaccgatggctgactgacaggttgcaggaagacgacattgaggtc
tcgcggacgcaggtgcagcgctggcttgataatggcttgatccgtcgcgcgcgccctggg
cggctcaaggcgagtgaaccggttgaggcgggcgacctctacgaggtggacgtgccggaa
gaggagccgctggagcttgtgccggatgagggcgtgccgtttgtcgtcgcctacgaggac
gacgacgtcatcgtggtggacaagccgcgcggcgtcgtggtgcacccgggggcgggccac
ttgcggggcacgctggtgaatggcctcttggcgcgcggcacctcgctctgtacgctcgcg
ggcgcgatgaggccgggcgtcgtgcaccggatcgacaaggacacgagcgggctcgtcgtg
tttgccaagtcggatcgcgcgtatcgcgcgctggtcgaggcgttccgcgcgcatgatgtg
gagcgggagtacgtggccatcgcgcacggccgcatgccgcaccgcaagggcaccatcgac
atgcccatcgcgcgggatccggcggatcgacagcggatggccgtccgccaagggggcaag
cgcgccgttacgcacttcgaggttctcgagctgtttgcgaactattcgtacctccgcctg
cggctggagacgggccggacgcatcagatccgcgtccacctcgcggccatcggtcatccc
atcgcgggcgatcccgtctacggtcctcgccacacactgcccatcgacggccaggcgctc
cacgcgcggacgctcggcttcacgcatccggacggtcgtcgccttcggttcgagagcgcc
gtgccctccgacatggcctggctccttgaggggttgcgccaggggcgaatcggagcttga
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integrated database retrieval system
