Aquifex aeolicus: aq_599
Help
Entry
aq_599 CDS
T00013
Symbol
rpoN
Name
(RefSeq) RNA polymerase sigma factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
aae
Aquifex aeolicus
Pathway
aae02020
Two-component system
aae02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
aq_599 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
aq_599 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aae03021
]
aq_599 (rpoN)
Transcription machinery [BR:
aae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
aq_599 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_26
Galactosyl_T
Arg_repressor
HTH_IclR
SF3b1
Motif
Other DBs
NCBI-GeneID:
1193276
NCBI-ProteinID:
NP_213418
UniProt:
O66858
Structure
PDB
LinkDB
All DBs
Position
408354..409550
Genome browser
AA seq
398 aa
AA seq
DB search
MLNQRLEVRQKLNLKLLLKQDLELLTYQTQELEKLIHEEVLVNPLIKGVFKKIPKSFEVK
ETVPYQIPYTPSELEELQQNIKLELEGKEQELALELLNYLNEKGFLSKSVEEISDVLRCS
VEELEKVRQKVLRLEPLGVCSKDVWEFLELQIEEIYPEEEEILKKALRDLKRGKKLKPEI
KGKLSRLRLFPLSSSAEKVYTFAKVDAIIEEENGEFFIYLYEDFIDIDLNEEYWELYKKS
RNLQKELKEAFERYESIRKVLDIRRRNLRKVLEKIVERQKDFLTGKGSLKPLTLREVSSE
IGIHESTLSRIVNSKYVKTPVGTYSLRTFFVRESAEGLTQGELMKLIKEIVENEDKRKPY
SDQEIANILKEKGFKVARRTVAKYREMLGIPSSRERRI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatcagagattagaagtaaggcaaaaactaaacttaaaacttttactgaaacaa
gatcttgaactcctcacttatcaaactcaggaacttgaaaaactcatacatgaagaggtt
ctcgtaaaccctctaataaaaggcgttttcaagaaaataccgaaaagttttgaagtaaag
gaaacggttccctaccagataccatacacaccctcagaactggaagaactccagcagaat
ataaaactggaacttgaaggaaaagagcaggaacttgctttagagcttttgaattatctg
aatgaaaagggcttcctatcaaaaagtgttgaggagatatccgacgtgctacggtgttct
gttgaagaactggaaaaagttcgtcaaaaggtgctaagacttgaacctttgggagtttgc
tcaaaagacgtgtgggagttcttagagttacagattgaagaaatttacccagaagaagag
gaaattttaaaaaaagcccttcgggatttaaaaagaggaaaaaagctaaaaccagaaatt
aagggaaaactctcaaggttaagactctttcctctttccagttcagcggagaaagtttac
acctttgcaaaagttgacgcaattatagaggaagaaaacggagagttttttatatacctt
tatgaagactttatagatatagacttaaacgaagagtactgggaactttacaaaaagtca
agaaatctccaaaaggaactaaaagaggcctttgagaggtacgaaagtataaggaaggtt
ctggatataagaagaaggaatttaaggaaagttttagagaaaatcgttgaaaggcaaaag
gattttttaacgggaaagggaagtttaaaaccgctgactttgcgtgaagtttcaagtgag
ataggaatacacgaatctacattgagcaggatagtgaactcaaagtacgtgaaaactccc
gtgggaacttactccttgagaactttctttgtgagagagtcggcggagggattaacgcaa
ggtgagttaatgaaattaatcaaggaaattgtagaaaacgaagataaaaggaaaccttac
agtgaccaagaaatagccaatattctaaaagagaaaggctttaaagttgcgaggagaacg
gttgcaaaatacagggaaatgttaggaattccctcctcaagggaaagaaggatttaa
DBGET
integrated database retrieval system
