Arthrobacter agilis: NCTC2676_1_01275
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Entry
NCTC2676_1_01275 CDS
T07056
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi03030
DNA replication
aagi03410
Base excision repair
aagi03420
Nucleotide excision repair
aagi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC2676_1_01275 (polA_1)
03410 Base excision repair
NCTC2676_1_01275 (polA_1)
03420 Nucleotide excision repair
NCTC2676_1_01275 (polA_1)
03440 Homologous recombination
NCTC2676_1_01275 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aagi03032
]
NCTC2676_1_01275 (polA_1)
03400 DNA repair and recombination proteins [BR:
aagi03400
]
NCTC2676_1_01275 (polA_1)
Enzymes [BR:
aagi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC2676_1_01275 (polA_1)
DNA replication proteins [BR:
aagi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC2676_1_01275 (polA_1)
DNA repair and recombination proteins [BR:
aagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC2676_1_01275 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC2676_1_01275 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
VDR31990
LinkDB
All DBs
Position
1:1393753..1396521
Genome browser
AA seq
922 aa
AA seq
DB search
MASSTDDTPEGSEPSPEQQGRGGRRADGSRNRLLVIDGHSMAFRAFYALPPENFSTDTGQ
HTNAVYGFTAMLINLIKDQKPSHVAVAFDLDTPTFRSEEYTEYKGGRSKTPEEFHGQVDL
IIKVMEAMRIPTISLDGYEADDILATLAYQAAGADWDVQVVSGDRDAFQLVNDRVTVLYP
KQGVTNIPQMDAEAIEEKYFVPPHQYSDLAALVGESADNLPGVPGVGPKTAAKWIKLYGG
LEGILENLDKIGGKVGDSLRANIEDVKRNRRLNRLLTDLDLPVDLDAMVSQHPDRSAIED
LFDSLQFNTLRKRLFDLFGEEESEEESDEQSAPPHVLLEEAGELTQWFAGTNQAQASVAL
ATETTGGTTDVVGIAVVTSSAAAFIPLEPLDADAEKVLGDWLASTDAPKIVHDFKTVFKL
ISARGLHLAGEVDDTAISGYLIQPDRRSYELADLAQYHLRLSITASANDSSGQQALDLGG
NDVASPAVVAAYAALQLSEHFAGQLVERGANQLLGGLELPLAEVLARMELTGVAVSVEGL
ERLLDDFSKTISAAGSEAYRIIGKEINLGSPKQLQTVLFDELELPRTKKIKTGYSTDADA
LTDLITKTGHPFLEQLLAYRDATKLRQTVEGLRKAVGDDGRIHTTYLQTVAATGRLSSTN
PNLQNIPVRSDEGRRIREVFVVGHGRDGNPYETLMTADYSQIEMRIMAHLSGDEGLISAF
LEGEDLHRFVGSHIFGVAPEDVTNAMRSKVKAMSYGLVYGLSSFGLSKQLAISVDEARTL
MRDYFERFGAVRDYLRGIVEQARKDGFTSTIEGRRRYLPDLSSDNRQLREMAERAALNAP
IQGSAADIIKKAMLGVDEALTQRGLRSRMLLQVHDELVLEIAKGETAEVEALVREQMAGA
ADLSVPLDVSVGTGASWHDAAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcgaccgacgatacgcccgaagggtccgaaccctcgccggagcagcagggg
cgcggtggccgccgcgccgacgggtcacgcaacaggctcctggtgatcgacggccattcg
atggccttccgggcgttctatgcgctcccgcccgagaacttctcgacggacaccggccag
cacaccaatgctgtgtacggcttcaccgccatgctgatcaacctcatcaaggaccagaag
ccgagtcacgtggccgttgccttcgacctcgacacgccgaccttccgttcggaggagtac
acggagtacaagggtggccgttccaagaccccggaggagttccacgggcaggtggacctg
atcatcaaggtgatggaggccatgcgcatccccaccatctcgctcgacgggtacgaggcg
gacgacatcctcgcgaccctcgcctaccaggctgccggtgcggactgggacgtgcaggtc
gtcagcggggaccgtgatgcgttccagctcgtgaacgaccgcgtcacggtgctctacccc
aagcagggcgtcacgaacatcccgcagatggacgcggaagccatcgaggagaagtacttc
gtgccgccgcaccagtactcggacctcgccgccctggtgggggagagtgcggacaatctc
ccgggggtgccgggcgtcggtccgaagaccgcggcgaagtggatcaagctgtacggcggg
ctcgaaggcattctggagaacctcgacaagatcggtggcaaggtcggcgactcgctccgg
gcaaacatcgaggacgtgaagcgcaaccgccgcctgaaccgcctgctcaccgacctcgac
ctcccggtggatctcgatgccatggtgtcgcagcatcccgaccgttccgcgatcgaggac
ctcttcgactcgctgcagttcaacacgttgcgcaagcgcctgttcgacctcttcggcgag
gaggagtcggaggaggagagtgacgagcagagtgccccgccgcatgtgctgctcgaggaa
gccggcgagctgacgcagtggtttgcggggaccaaccaggcgcaggcgtccgtcgccctc
gcgaccgagacgactggggggaccaccgacgtcgtcgggatcgccgtcgtgacgtcctcg
gctgccgccttcatcccgctcgagccactcgacgcggacgccgagaaggtcctgggggac
tggctggccagtactgacgcgccgaagatcgtccacgatttcaagaccgtgttcaagctg
atctccgcccgcggcctccacctcgccggagaggtcgacgacaccgcgatctccggctac
ctgatccagcccgatcgccgcagctacgagctggccgacctcgcgcagtaccatctccgt
ctctccatcacggcgtccgcgaacgactcctccggccagcaggcgctcgacctcgggggc
aacgacgtcgcctcgcccgccgtcgtcgccgcctacgcagccctgcagctgagcgagcac
ttcgccggacaactcgtggagcgcggcgccaaccagctgctcggcggcctcgaactcccg
ctcgcggaggtcctcgcccgcatggagctcaccggtgtcgccgtctcggtcgagggactg
gagcgcctcctcgacgacttctcgaagaccattagtgccgccggttccgaggcctatcgg
atcatcggcaaggagatcaacctcgggtcgcccaagcagctgcagaccgtcctcttcgac
gaactcgaacttcccaggaccaagaagatcaagaccgggtactccaccgacgcggacgcc
ctgacggacctcatcaccaagaccgggcatccattcctcgagcagctgctcgcctaccgt
gacgcgacgaagcttcggcagaccgtcgaagggctgcggaaggccgtgggcgacgacggc
cgcatccacaccacctacctgcagaccgtcgcggcgaccggacggctgtcctcgaccaac
ccgaacctgcagaacatcccggtccgctccgacgaggggcgccggatccgcgaggtgttc
gtggtcggtcacggccgggacggaaatccgtacgagacgttgatgacggccgactactcg
cagatcgagatgcgcatcatggcccacctgtccggcgacgagggcctcatctcggcgttc
ctcgaaggggaggacctccaccgcttcgtgggttcgcacatcttcggtgtcgcgcccgaa
gacgtcacgaacgccatgcgatccaaagtgaaggccatgtcctacggcctggtctacggc
ctcagctccttcggactgtcgaagcagctcgcgatctcggtggacgaggcgcggacgctc
atgcgcgactacttcgagcgcttcggcgcggtgcgtgactacctgcgcggcatcgtcgag
caggccaggaaggacggcttcacctccaccatcgagggacggcgccgctacctgccggat
ctctccagcgacaaccggcagctgcgggagatggcggagcgtgctgcgctgaacgcgccg
atccagggttcggccgccgacatcatcaagaaggcgatgctcggcgtggacgaggcgctg
acccagcgcggtcttcgctcccgcatgctgctgcaggtgcatgacgagctggtcctcgag
atcgccaagggcgagacggcggaggtcgaggcgctggtccgtgaacagatggcgggtgcc
gcggatctctccgttcccctcgacgtgtccgtgggtacgggagccagctggcacgacgcc
gcgcactga
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