KEGG   Arthrobacter agilis: NCTC2676_1_01275
Entry
NCTC2676_1_01275  CDS       T07056                                 
Symbol
polA_1
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
aagi  Arthrobacter agilis
Pathway
aagi03030  DNA replication
aagi03410  Base excision repair
aagi03420  Nucleotide excision repair
aagi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aagi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC2676_1_01275 (polA_1)
   03410 Base excision repair
    NCTC2676_1_01275 (polA_1)
   03420 Nucleotide excision repair
    NCTC2676_1_01275 (polA_1)
   03440 Homologous recombination
    NCTC2676_1_01275 (polA_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aagi03032]
    NCTC2676_1_01275 (polA_1)
   03400 DNA repair and recombination proteins [BR:aagi03400]
    NCTC2676_1_01275 (polA_1)
Enzymes [BR:aagi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC2676_1_01275 (polA_1)
DNA replication proteins [BR:aagi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NCTC2676_1_01275 (polA_1)
DNA repair and recombination proteins [BR:aagi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NCTC2676_1_01275 (polA_1)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCTC2676_1_01275 (polA_1)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: VDR31990
LinkDB
Position
1:1393753..1396521
AA seq 922 aa
MASSTDDTPEGSEPSPEQQGRGGRRADGSRNRLLVIDGHSMAFRAFYALPPENFSTDTGQ
HTNAVYGFTAMLINLIKDQKPSHVAVAFDLDTPTFRSEEYTEYKGGRSKTPEEFHGQVDL
IIKVMEAMRIPTISLDGYEADDILATLAYQAAGADWDVQVVSGDRDAFQLVNDRVTVLYP
KQGVTNIPQMDAEAIEEKYFVPPHQYSDLAALVGESADNLPGVPGVGPKTAAKWIKLYGG
LEGILENLDKIGGKVGDSLRANIEDVKRNRRLNRLLTDLDLPVDLDAMVSQHPDRSAIED
LFDSLQFNTLRKRLFDLFGEEESEEESDEQSAPPHVLLEEAGELTQWFAGTNQAQASVAL
ATETTGGTTDVVGIAVVTSSAAAFIPLEPLDADAEKVLGDWLASTDAPKIVHDFKTVFKL
ISARGLHLAGEVDDTAISGYLIQPDRRSYELADLAQYHLRLSITASANDSSGQQALDLGG
NDVASPAVVAAYAALQLSEHFAGQLVERGANQLLGGLELPLAEVLARMELTGVAVSVEGL
ERLLDDFSKTISAAGSEAYRIIGKEINLGSPKQLQTVLFDELELPRTKKIKTGYSTDADA
LTDLITKTGHPFLEQLLAYRDATKLRQTVEGLRKAVGDDGRIHTTYLQTVAATGRLSSTN
PNLQNIPVRSDEGRRIREVFVVGHGRDGNPYETLMTADYSQIEMRIMAHLSGDEGLISAF
LEGEDLHRFVGSHIFGVAPEDVTNAMRSKVKAMSYGLVYGLSSFGLSKQLAISVDEARTL
MRDYFERFGAVRDYLRGIVEQARKDGFTSTIEGRRRYLPDLSSDNRQLREMAERAALNAP
IQGSAADIIKKAMLGVDEALTQRGLRSRMLLQVHDELVLEIAKGETAEVEALVREQMAGA
ADLSVPLDVSVGTGASWHDAAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atggcgtcgtcgaccgacgatacgcccgaagggtccgaaccctcgccggagcagcagggg
cgcggtggccgccgcgccgacgggtcacgcaacaggctcctggtgatcgacggccattcg
atggccttccgggcgttctatgcgctcccgcccgagaacttctcgacggacaccggccag
cacaccaatgctgtgtacggcttcaccgccatgctgatcaacctcatcaaggaccagaag
ccgagtcacgtggccgttgccttcgacctcgacacgccgaccttccgttcggaggagtac
acggagtacaagggtggccgttccaagaccccggaggagttccacgggcaggtggacctg
atcatcaaggtgatggaggccatgcgcatccccaccatctcgctcgacgggtacgaggcg
gacgacatcctcgcgaccctcgcctaccaggctgccggtgcggactgggacgtgcaggtc
gtcagcggggaccgtgatgcgttccagctcgtgaacgaccgcgtcacggtgctctacccc
aagcagggcgtcacgaacatcccgcagatggacgcggaagccatcgaggagaagtacttc
gtgccgccgcaccagtactcggacctcgccgccctggtgggggagagtgcggacaatctc
ccgggggtgccgggcgtcggtccgaagaccgcggcgaagtggatcaagctgtacggcggg
ctcgaaggcattctggagaacctcgacaagatcggtggcaaggtcggcgactcgctccgg
gcaaacatcgaggacgtgaagcgcaaccgccgcctgaaccgcctgctcaccgacctcgac
ctcccggtggatctcgatgccatggtgtcgcagcatcccgaccgttccgcgatcgaggac
ctcttcgactcgctgcagttcaacacgttgcgcaagcgcctgttcgacctcttcggcgag
gaggagtcggaggaggagagtgacgagcagagtgccccgccgcatgtgctgctcgaggaa
gccggcgagctgacgcagtggtttgcggggaccaaccaggcgcaggcgtccgtcgccctc
gcgaccgagacgactggggggaccaccgacgtcgtcgggatcgccgtcgtgacgtcctcg
gctgccgccttcatcccgctcgagccactcgacgcggacgccgagaaggtcctgggggac
tggctggccagtactgacgcgccgaagatcgtccacgatttcaagaccgtgttcaagctg
atctccgcccgcggcctccacctcgccggagaggtcgacgacaccgcgatctccggctac
ctgatccagcccgatcgccgcagctacgagctggccgacctcgcgcagtaccatctccgt
ctctccatcacggcgtccgcgaacgactcctccggccagcaggcgctcgacctcgggggc
aacgacgtcgcctcgcccgccgtcgtcgccgcctacgcagccctgcagctgagcgagcac
ttcgccggacaactcgtggagcgcggcgccaaccagctgctcggcggcctcgaactcccg
ctcgcggaggtcctcgcccgcatggagctcaccggtgtcgccgtctcggtcgagggactg
gagcgcctcctcgacgacttctcgaagaccattagtgccgccggttccgaggcctatcgg
atcatcggcaaggagatcaacctcgggtcgcccaagcagctgcagaccgtcctcttcgac
gaactcgaacttcccaggaccaagaagatcaagaccgggtactccaccgacgcggacgcc
ctgacggacctcatcaccaagaccgggcatccattcctcgagcagctgctcgcctaccgt
gacgcgacgaagcttcggcagaccgtcgaagggctgcggaaggccgtgggcgacgacggc
cgcatccacaccacctacctgcagaccgtcgcggcgaccggacggctgtcctcgaccaac
ccgaacctgcagaacatcccggtccgctccgacgaggggcgccggatccgcgaggtgttc
gtggtcggtcacggccgggacggaaatccgtacgagacgttgatgacggccgactactcg
cagatcgagatgcgcatcatggcccacctgtccggcgacgagggcctcatctcggcgttc
ctcgaaggggaggacctccaccgcttcgtgggttcgcacatcttcggtgtcgcgcccgaa
gacgtcacgaacgccatgcgatccaaagtgaaggccatgtcctacggcctggtctacggc
ctcagctccttcggactgtcgaagcagctcgcgatctcggtggacgaggcgcggacgctc
atgcgcgactacttcgagcgcttcggcgcggtgcgtgactacctgcgcggcatcgtcgag
caggccaggaaggacggcttcacctccaccatcgagggacggcgccgctacctgccggat
ctctccagcgacaaccggcagctgcgggagatggcggagcgtgctgcgctgaacgcgccg
atccagggttcggccgccgacatcatcaagaaggcgatgctcggcgtggacgaggcgctg
acccagcgcggtcttcgctcccgcatgctgctgcaggtgcatgacgagctggtcctcgag
atcgccaagggcgagacggcggaggtcgaggcgctggtccgtgaacagatggcgggtgcc
gcggatctctccgttcccctcgacgtgtccgtgggtacgggagccagctggcacgacgcc
gcgcactga

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