Glutamicibacter arilaitensis: AARI_18200
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Entry
AARI_18200 CDS
T01320
Name
(GenBank) putative ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aai
Glutamicibacter arilaitensis
Pathway
aai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AARI_18200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aai03019
]
AARI_18200
03009 Ribosome biogenesis [BR:
aai03009
]
AARI_18200
Enzymes [BR:
aai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AARI_18200
Messenger RNA biogenesis [BR:
aai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AARI_18200
Ribosome biogenesis [BR:
aai03009
]
Prokaryotic type
rRNA processing factors
AARI_18200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
CBT76036
UniProt:
E1VWN3
LinkDB
All DBs
Position
complement(2061772..2064612)
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AA seq
946 aa
AA seq
DB search
MTLAELNAAAGVEESPYRWRATRRTQISTPDSTKRASRQAERRAQAARNAANDEAVEAAA
AKQEASEQKAVEETAAAAEASTAAPVEPETAKVEEAPVVDQTGKLLAEHGSTMILNPFAV
PETAQAVLAQAVARKQEPARRAAAASEADEDDVTSRRRRRRRRGDVDLELEGGSQDDPPN
TVTRVRAPRGTIESHASVNNKVASVRGSTRLEAKRQRRRESRETGRRRQVITEAEFLARR
ESVERKMIVRQREDRIQIGVLEDGVLAEHFVSKTQQDSLIGNVYVGKVQNVLPSMEAAFV
DIGRGRNAVLYAGEVNWDVAALEGAPRRIENALKAGDSVLVQVTKDPVGHKGARLTSQIS
LPGRYLVYVPGGSMTGISRKLPDVERQRLKKILKDHLPENAGVIVRTAAEGASEEELTND
INRLRAQWEGIEEQANSTKTLAPELLYSEPDLTIKVVRDVFNEDFTKLIVSGEHAWDTIE
AYVMYVAPDLMGRLEKWEAEEDIFTNFRVDEQIAKALDRKVFLPSGGSLVIDRTEAMTVI
DVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLESNRDLVLR
RLVECLGRDRTKHQVAEVTSLGLIQMTRKRMGTGLLEVFGEECEHCAGAGVITHDEPVET
RKTFNSAGEQHTKKFNDKPSRNSRRRRGGEKDEAKPVEKKEPVSEEKDEATRHALANIAA
ASHLDAAADNAVSIDGEQIPVTKAQASDSEAAAVTLEALEAALPGKGESSEEQDGSRKPR
RRSRSRGRNRNQLEESTSGNDEASATLEQPAAPGPEQASKSEEQPRKRSRRASRPQAAAQ
QDQPVITGLAMPAASAPAAAETSTAVSAPVAAPAATTQNSTKPKRRSRRATSAQGDATAE
VLVAEVSAATGSVVQMDASGSKKDKPAEPAGQPVMFGVGVPVRELK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggccgaactcaatgctgctgccggcgttgaagaaagcccataccgctggcgg
gcaactcgccgcacgcagatatcgacccctgactccaccaagcgcgcaagccgccaggct
gaacgccgtgcacaggcggcacgcaatgccgctaatgacgaagcagtcgaggcagccgca
gccaagcaggaagcttcagagcagaaggctgtggaagaaactgcagctgcagccgaagcg
tcaaccgctgctccagtcgagccggaaaccgccaaggttgaagaagcacctgtcgtcgat
cagaccggcaagctgctggctgaacacggcagcaccatgatcttgaatcctttcgccgtg
ccagaaactgcacaggcagtgctggcacaggccgtggccaggaagcaggaacctgctcgc
cgtgccgccgccgcttcggaggccgacgaggacgatgtcacttcgcgccgtcgccgccgt
cgtcgtcgtggcgatgtggacctggaacttgaaggcggttcgcaagatgatccgccgaac
accgtcacccgtgtgcgcgcaccgcgtggcaccatcgagagccatgcctcggtcaacaac
aaggttgcttcggtgcgcggctccacccgtttggaagccaagcgccagcgtcgccgcgaa
tcgcgcgaaaccggtcgtcgccgccaggtgatcaccgaggccgagttcttggcccgccgc
gagtccgttgaacgcaagatgattgtgcgccagcgcgaagatcgcatccagatcggtgtg
ctggaagatggggtgctcgctgagcacttcgtttccaagacccagcaggattcgctgatc
ggcaacgtgtacgtcggcaaggtccagaacgtgctgccatcgatggaagctgctttcgtg
gatatcggacgcggccgcaacgccgtgctgtacgccggcgaagtcaactgggatgttgct
gcgctggaaggcgcaccacgccgcatcgagaacgcgctgaaggctggcgactcggtactg
gtccaggtcaccaaggacccagtgggtcacaagggtgcccgcctgaccagccagatctcg
ctgcccggccgctacctggtctacgtgccaggcggttcgatgaccggcatctcccgcaag
ctgcctgacgttgagcgccagcgcctgaagaagatcctgaaggaccacctgccggagaac
gcgggcgtcatcgtgcgcaccgctgccgaaggcgcgtccgaggaagaactgaccaacgat
atcaaccgactgcgcgcgcagtgggaaggcatcgaagagcaggccaactccaccaagacc
ttggctccggaactgctgtactccgagcctgatctgaccatcaaggtagtgcgcgacgtc
ttcaacgaggacttcaccaagctgatcgtctccggcgaacacgcatgggacaccatcgag
gcctacgtcatgtacgtagccccggatctgatgggccgcttggagaagtgggaagccgaa
gaggacatcttcaccaacttccgcgtcgacgagcagatcgccaaggcactggaccgcaag
gtcttcctgccatcgggcggttctctggtcatcgaccgcaccgaagccatgaccgtcatc
gacgtgaacaccggcaaattcaccggctcgggcggcaacctcgaagaaaccgtaaccaag
aacaacttggaagcggccgaggaagttgtccgccagctgcgcctgcgcgacatcggcggc
atcatcgtcatcgacttcatcgacatggtccttgaatccaaccgcgatctggtgctgcgc
cgactggtggagtgcctgggccgggaccggaccaagcaccaggtggccgaggtgacctcg
ctgggtctgatccagatgacccgcaagcgcatgggcaccggtttgcttgaagtctttggt
gaagagtgcgagcactgtgccggtgctggtgtcatcacccacgacgagccagttgaaacc
cgcaagaccttcaactcggccggcgagcagcacaccaagaagttcaacgacaagccaagc
cgcaactcccgccgccgccgcggtggcgagaaggacgaggctaagccagttgagaagaag
gagccggtatcggaggagaaggacgaggccacgcgccacgccctggccaacattgccgca
gcttcgcacctggatgccgctgcagataacgcagtgagcatcgatggcgagcagattcct
gtcaccaaggcgcaagcatcggattccgaagctgctgcggtgaccttggaagcgctggaa
gcagcgttgccgggcaagggcgagtccagcgaggaacaggacggcagtcgcaagccgcgc
cgccgttcacgctcccgtggacgcaaccggaaccagcttgaggaaagcacttcaggtaac
gatgaggcttcggctaccctggagcagccagctgctcctggaccggagcaggcatcgaag
tccgaagagcagccccgcaagcgttcgcgccgggcttcgcgtccgcaggccgcagcacag
caggaccagccggtcatcaccggcctggccatgcctgctgccagcgcacctgcagccgct
gagaccagcaccgctgtttccgctcccgttgccgcacctgcggcaaccacacagaattct
acgaagccaaagcgccgtagtcgtcgggccacctcggcccagggcgatgcgaccgcagag
gttctcgtggcagaggtatccgctgctaccggttcggtagttcaaatggatgcctccggt
tcgaagaaagataagccagctgagcctgccgggcaaccggtaatgttcggtgtgggtgtt
ccagtacgcgaactgaaatag
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