Aminobacter aminovorans: AA2016_0284
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Entry
AA2016_0284 CDS
T04343
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aak03016
]
AA2016_0284
Enzymes [BR:
aak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AA2016_0284
Transfer RNA biogenesis [BR:
aak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AA2016_0284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMS39224
LinkDB
All DBs
Position
complement(279051..279668)
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AA seq
205 aa
AA seq
DB search
MTIRFHKHDLPDLQHYDVDAVAIDTETLGLNPHRDRLCVVQISPGDGTADVIQIAPGQKK
APNLTALLKNRKVTKLFHFGRFDIAVLYNAFGVMTEPVFCTKIASRLVRTYADRHGLKDI
CNELLGVSLSKQQQSSDWAAETLSPEQLEYAASDVLYLHRLRDVLAARLERDGRSREAEA
CFRFLPTRAKLDLMGWDEEDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgctttcacaagcacgaccttcccgacctccagcactatgacgtcgatgcc
gttgccatcgacaccgagacgctgggcctgaacccgcatcgcgaccgcctttgcgtcgtc
cagatttcgccgggcgacggcaccgccgacgtcatccagatcgcgccgggccagaagaag
gcgccgaacctcaccgcgctgctgaagaaccgcaaggtgaccaagctgttccatttcggc
cgcttcgacatcgccgtgctctacaacgccttcggcgtgatgaccgagccggtgttctgc
accaagatcgcctcgcgcctggtccgcacctacgccgaccgccacggcctgaaggacatc
tgcaacgagcttttgggcgtgtcgctgtccaagcagcagcagtcgtcggactgggcggca
gagacgctgtcgccggagcagctcgaatacgccgcctccgatgtgctctacctgcaccgg
ctgcgcgacgtgctcgccgctaggctggagcgcgatggccgcagcagggaagccgaggcc
tgcttccgcttcctgcccacccgcgccaaactcgacctgatgggctgggacgaagaagac
atcttcgcccatagctga
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