Alteromonas australica H 17: EP13_11255
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Entry
EP13_11255 CDS
T03220
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aal
Alteromonas australica H 17
Pathway
aal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EP13_11255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aal03400
]
EP13_11255
Enzymes [BR:
aal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EP13_11255
DNA repair and recombination proteins [BR:
aal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP13_11255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIF99215
UniProt:
A0A075P2K1
LinkDB
All DBs
Position
complement(2477671..2481198)
Genome browser
AA seq
1175 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLLKQQPTPLFCPETILVESPGMQHWISMQLAREQGVAMNID
FPLPVRFMWNTARAVLGSDTVPTQSPYRREVLVWRIDKLLQDSSLMAAPAFEDVLRYWQR
AGSEQEQGVQRLQLATALADVYEQYLLYRPDWLFAWENNERIVFNDMEIWQSEIWRQLTQ
SEPLHPARLHQLTLDALSHGTAPSQLPQRVVVFAINTMAPQLIAFFDALAQHTDIHIFHL
NPSVNYWGDAKSDSELAQQLRMEGLEKWMSNEQSNPLLGNLGKQGRELFNLLTELDTFEI
SAFDAPSMEENTLTLSSSSEPASGLLEYIHHDILHAAPAQPKCEEALKKEDDSVTIMCAH
SALREVQVLHDHLLFWLSQDKTRTPSDILVMCPAIENYAPFVDAVFHCVGTKPLRENEAV
RLPCSIADRSPMDAEPLIAAFMALLQLPDSRFGVSDIMDYVQLDAVQKRFNITQGDIDQI
LVWLKQAHIHWGLDSQHKSFVSEGVTEQDAYSWWWGLRRLLMGMLAPDKEWVVDNLLTIP
DVEGQSALVLGKLIEIVDLLGTFADQLNTPRTPAIWADVLLELRDACFKPTEEQERSWDL
IAKVAADLAARCEEAEYDYTLSLRQVRELLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIP
FKKVCILGLNDSEFPRKSTPLGLDLMAGPARRLGDRSRRLEDRYLFLEAIISTRESLYLS
YQGNDVKNNSERQPSLVLAEFLDMLALGYQVPLSRYVTHAPLHPFSEANFMGRMASFEKG
WLRLAKALHSQKRSPDDGGSTGDKHASVEPTTNSAPTIALSDGQEAKDLRLSSAQIARGF
KDPLAFFAQQRLGVNLSHSAELLDNSEPFETNALIRYQVLDAIFTSPMDARGNDENTLYS
EQVAEFARLRGDIPDNPVAQDELNMWKEGAHALTQAMGPVDSDVKRASFTGKHITFTASA
YEGADSLIALSAGKVNDIKALEYFISQLVFCSEEERQRYSHYPLDIYFCDWEKGETKLMK
RRCMPMDKDIAAQILLFIEALFIRLYTTPTPLYRSLFADFIPGKRKSDSASVVAMIKPDV
YHQLLDGLSDVSGMSVESEGEQDVLRKATALFETELADRLLKNWLQTHGQYTPDMANNPY
LKWLYPEGVSWRDLPYKEGFILFAMVHNAAMEEAL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgcgctttacccctctaacaagcttgaacacctaagctttcttcttactaccttg
ctgaagcaacagcccacacccctattttgtcctgagactattttagttgaaagtcctggc
atgcagcactggatcagtatgcaattagcccgtgagcagggggtagcgatgaatatcgac
tttcctctacctgtcaggtttatgtggaataccgctagagcagtattaggcagcgatacg
gtaccaacgcagtctccttatcgtcgagaagtcttagtgtggcgtatagacaaactactg
caagactcgtcattaatggcggcgccagcattcgaagatgtgctgcgctactggcaacga
gccggtagtgagcaagagcagggtgttcaacgattgcaattagccacagccctcgccgat
gtgtatgaacagtatttgttgtatcgcccagactggctttttgcatgggaaaacaatgag
cgtattgttttcaacgacatggaaatctggcagagtgagatatggcgtcaactgacccaa
tctgaacccttacaccctgctcgattacaccaacttactttggatgcgctgagtcatggc
acagcgccaagccaattaccccagcgggtagtggtatttgcgattaataccatggcaccc
caacttatcgctttcttcgatgcgctcgcacaacatactgacattcatatttttcatttg
aaccctagcgttaattattggggagatgctaaaagtgacagtgaattggctcaacagcta
cgtatggaaggtcttgagaaatggatgagcaacgagcaaagcaaccctttgctaggaaat
ttaggcaagcagggtcgggaattatttaatttactcactgaactagacacgtttgagatt
agtgcatttgatgcgccctcgatggaggaaaacacgctcacgttatcgtcatcttccgag
cctgcttctgggctgttagagtatatacatcacgatattttgcacgcggccccagcccag
cctaagtgcgaagaggcattaaagaaagaggatgatagcgtcaccattatgtgcgcgcat
tctgcacttcgagaagttcaagtgttgcacgaccatttattgttttggttgtcgcaagat
aaaactcgtacgccgtcagatattctcgttatgtgtcccgcgatagaaaattatgcccct
tttgttgatgctgtgtttcattgtgtgggaacgaaaccactgagagaaaatgaggcggtt
cgcctcccttgctctatcgcagacagaagtcctatggacgcggagccattaattgccgcc
ttcatggcattattgcaactaccagacagccgttttggtgtgtctgacattatggattac
gtgcaactggatgctgtccaaaaacggtttaatattacccagggtgatatcgatcaaata
ttggtatggctaaaacaagcccacattcattggggattagacagccaacataaatccttt
gtttcggagggcgtcacagaacaagacgcctacagctggtggtggggacttcgccgattg
ctaatgggtatgttagcgccagataaagaatgggtggtggataacctgctgactattcca
gatgtagaggggcaatccgcccttgtactaggtaagcttatcgaaattgtcgacttactt
ggcacctttgctgaccaacttaatacgccacgaacgccggctatttgggctgatgtactt
cttgaactgcgggatgcctgttttaaaccaaccgaagaacaagagcgtagttgggatctt
atcgcgaaggtggcggctgacttagccgcacgttgtgaggaagctgaatatgattacact
ttaagcttacgtcaagtcagagaactgttacttaatcgattctcctcacccgacgcgggt
aaccattttatgacaggtcaggttacggtgtgttcaatgctgcccatgcgtagtattccc
tttaaaaaggtgtgtatcctggggttgaatgacagtgagtttcctcgaaaatcgacccca
ttagggttagacctgatggctgggccagcaaggcgtcttggcgaccggtccaggcgttta
gaagatagatatttgtttttggaagcaatcatctcaacacgagagagtctttacttaagc
taccaaggcaatgatgtaaagaataacagtgaacgacaacccagcttggtgttggcagaa
ttcctcgacatgctggcacttggctatcaagtgcccctgtctcgttatgttactcacgcg
cctttgcacccttttagtgaagccaattttatggggcgaatggccagttttgaaaagggc
tggttgcggttggccaaggcgttacacagccagaagcgaagccctgatgatggggggtct
accggggacaagcatgcatcagtagaacctacgacgaattccgcccccactattgccctg
tctgatggtcaagaggcgaaggacttgcgtctgtctagtgcgcaaatagctcgcgggttt
aaagatccattggccttttttgctcagcagcggttgggggttaatttgtctcactctgcg
gaattgttggataacagtgagcccttcgaaactaacgctttaattcgctatcaggtattg
gacgctatttttacctcgccaatggatgctcgtggtaacgatgaaaacacgttatatagt
gaacaggtggcagaattcgcgcgcttgcgaggcgacattcctgataaccctgttgcgcaa
gacgagctgaatatgtggaaagagggggcacatgcgctcactcaagctatgggcccagta
gacagtgatgttaagcgtgccagttttaccggtaaacatattacgtttaccgccagcgct
tatgagggcgcagacagtttaatcgccctaagcgcgggtaaagtgaacgacattaaagca
cttgaatactttatatctcagttagtattttgcagcgaagaggaaagacaacgttacagc
cactatccattagatatctatttctgcgattgggaaaaaggtgagacgaaattgatgaag
cgcaggtgcatgcctatggataaagacatcgctgctcagattttattgtttatagaggcg
ctttttattcgcctctacaccacaccaaccccactttatcgtagtttgttcgccgatttc
attccaggcaagcgaaaatccgacagcgcctctgtcgttgcaatgattaagcctgacgtt
tatcaccagttgctagacgggctctcagacgtatctggtatgtcggtagaatcagaggga
gagcaggatgttttacgaaaggcaacagcattatttgagaccgagctggctgataggcta
ttgaaaaattggttacaaacccatggtcaatataccccagatatggcaaataacccttac
ttaaagtggctttatccagagggggtaagttggcgtgacttaccgtacaaagaaggcttt
atcctgtttgccatggtgcacaatgcagcgatggaggaggcgctatga
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integrated database retrieval system
